Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c09
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    23   2.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   4.6  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 415 YFRPAAVINQTRNRNESERIASRREGRKKYH 507
           Y RPA+     + R    ++  R+E R KY+
Sbjct: 66  YLRPASGFQSLQFRLLENKLGVRQENRVKYN 96


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 415 YFRPAAVINQTRNRNESERIASRREGRKKYH 507
           Y RPA+     + R    ++  R+E R KY+
Sbjct: 126 YLRPASGFQSLQFRLLENKLGVRQENRVKYN 156


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 415 YFRPAAVINQTRNRNESERIASRREGRKKYH 507
           Y RPA+     + R    ++  R+E R KY+
Sbjct: 126 YLRPASGFQSLQFRLLENKLGVRQENRVKYN 156


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 499 FSSLLFATRSVRFHYGFEFDLSPRRV 422
           F++ L   + +R H G   DL+P ++
Sbjct: 204 FTNALVLQQHIRLHTGEPTDLTPEQI 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,757
Number of Sequences: 336
Number of extensions: 2689
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)