Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b12
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    30   0.016
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    30   0.016
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    25   0.47 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +3

Query: 72  WWFIFLKMASVATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVE 227
           W   FLK+ ++ TV   +LG  V++K   +  TSQ  IK   T +Y N K++
Sbjct: 55  WGVKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQ--IKKNVTRAYCNKKID 104


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +3

Query: 72  WWFIFLKMASVATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVE 227
           W   FLK+ ++ TV   +LG  V++K   +  TSQ  IK   T +Y N K++
Sbjct: 55  WGVKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQ--IKKNVTRAYCNKKID 104


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 568 MPAKRRNSVSPRSTLAPSPEPEAPSVFPDTLASRK 672
           +P +  ++ S  S  +PS  PE  SV P +L  R+
Sbjct: 202 IPQRTASTASSASNYSPSQSPEPESVRPLSLVVRR 236


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = -1

Query: 694 PVNTISIAFDLPTYLGRRWVPPAPGMVPMLISG*PNFAFSPA*MISHSIASSQPPPRAKP 515
           P++T S+  D   +     +PP PG+ P      P+ +  PA +++       P    KP
Sbjct: 211 PISTSSLPSDFYRFSPTGLIPPHPGLSPHP----PHLSSHPA-IVTPGPKQELPDLNHKP 265

Query: 514 LTAAMMGFP 488
           L   +   P
Sbjct: 266 LNLTIKKMP 274


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = -1

Query: 694 PVNTISIAFDLPTYLGRRWVPPAPGMVPMLISG*PNFAFSPA*MISHSIASSQPPPRAKP 515
           P++T S+  D   +     +PP PG+ P      P+ +  PA +++       P    KP
Sbjct: 103 PISTSSLPSDFYRFSPTGLIPPHPGLSPHP----PHLSSHPA-IVTPGPKQELPDLNHKP 157

Query: 514 LTAAMMGFP 488
           L   +   P
Sbjct: 158 LNLTIKKMP 166


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 589 SVSPRSTLAPSPEPEAPSVFPDTLASRKQWRSC*QETSLM 708
           SVSP +   PSP PE   + P   AS K+  +    T L+
Sbjct: 92  SVSPTTPPTPSPPPE-ERLTPSKDASSKRIXTAFTSTQLL 130


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +3

Query: 609 IGTIPGAGGTQ--RLPRYVGKSKAMEIVLTGNF 701
           +GT+ GAGGT    +   V  S  + IV  G F
Sbjct: 287 VGTMTGAGGTAIVSISTSVSTSVYLAIVFNGLF 319


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 467 FTKETLFCVAAVCIVLHLL 411
           FT   LFC A +   +HLL
Sbjct: 176 FTMHLLFCCAFIFFNMHLL 194


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 608 HWHHPRSRRHPASSQIRWQVESNG 679
           HWH   S+  P  SQ   Q+  NG
Sbjct: 273 HWHLTDSQSFPLVSQRVPQLAKNG 296


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 479 LQLWEAHHCRC*WFRSWRWL*AGN 550
           L++  AHHCR  +  S  W  AG+
Sbjct: 69  LEMTLAHHCRFKFSSSVGWSPAGH 92


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 125 AGKECTEQVQSGIRNKPSIHK 187
           AG   T +V +   NKP IHK
Sbjct: 311 AGWSATSRVFATFYNKPLIHK 331


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/44 (22%), Positives = 18/44 (40%)
 Frame = +1

Query: 571 PAKRRNSVSPRSTLAPSPEPEAPSVFPDTLASRKQWRSC*QETS 702
           P + R ++       P+      + FP   +  +QWR+    TS
Sbjct: 329 PKRPRPNIDRHEVTRPAAPANRGNGFPKRSSDEQQWRNNQPSTS 372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,786
Number of Sequences: 336
Number of extensions: 4134
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)