Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a10
         (283 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.82 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   3.3  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    20   4.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    20   5.8  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    19   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 0.82
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 202 FFFF*FILATDQLIFLINKYCF 267
           +F++ FI+ T  L+FL+  Y F
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYF 136



 Score = 21.4 bits (43), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 202 FFFF*FILATDQLIFLINKYCF 267
           +F++ FIL T  L+ L+  Y F
Sbjct: 240 YFYYAFILFTVHLLLLVCIYYF 261



 Score = 21.0 bits (42), Expect = 2.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 198 MFFFFLIYTCYRSIDIFNK*ILFL 269
           +FF   IY  Y +  IF   +LFL
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFL 163



 Score = 20.2 bits (40), Expect = 4.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 202 FFFF*FILATDQLIFLINKYCF 267
           +F+  FI+ T  L+FL+  Y F
Sbjct: 148 YFYCAFIIFTVHLLFLLCIYHF 169


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 171 IVTNA*WTQMFFFFLIYTCYRSIDIFNK*ILFLNE 275
           I+ N   T +FFF    T      + ++  LFLNE
Sbjct: 88  ILLNQLITPLFFFHSFMTSVLFSQVASRWPLFLNE 122


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -1

Query: 268 KNNIYLLKISID 233
           K+NI++LK S+D
Sbjct: 99  KSNIFILKESVD 110


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 166 KFSILQITVIISVQFHKTTN 107
           KF+IL +  + + Q H  T+
Sbjct: 4   KFAILALFALTTTQIHAATD 23


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 19.4 bits (38), Expect = 7.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 32  TLKVFFQMNLTNFYPTKTVGIKAFVVS 112
           TLK +   +  N YPTK   I   +++
Sbjct: 98  TLKAWLNEHKKNPYPTKGEKIMLAIIT 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,511
Number of Sequences: 336
Number of extensions: 1125
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4790565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)