Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0113
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   3.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.6  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 672 IPRLWQCATSGSCVFVGFTSIWLI 601
           +PR + C T G  + +G   IW I
Sbjct: 37  VPRWYICYTIGVIITIGCLCIWSI 60


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 509 RQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVN 622
           R + L + IGV  F++      VSN+   P++++   N
Sbjct: 41  RDVELIKQIGVKEFDSFHDHVSVSNTNTEPLLSEALTN 78


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -2

Query: 210 ASIAQYTAWRTSSIESDSLAVPRPVPK 130
           ++ A    W+ + + SD    P P P+
Sbjct: 59  SAAADVDGWQVTPLPSDGTTSPEPDPE 85


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 684 AITAIPRLWQCATSG 640
           A  A+  +WQ ATSG
Sbjct: 112 AAAAVKDVWQSATSG 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,658
Number of Sequences: 336
Number of extensions: 3488
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)