Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0108
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   6.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.9  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 452 SWGDELSNDSFNPTIRSPRIIHPCCLRSTLV 360
           SW   L+N ++N T R    ++ CCL  ++V
Sbjct: 38  SWYYLLTNLTYNNTNRKYYWLNVCCLNLSIV 68


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 224  TIRTAFREHMRNIARNRASDSEDYDPARYVSA 319
            T+R A   H+R +A N    SE  +    ++A
Sbjct: 960  TLRPATTYHIRIVAENEIGSSEPSETVTIITA 991


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 460 FQLAGGTNCRMIHLIRQFALLGS 392
           FQ +G     M+HL+ +   LGS
Sbjct: 516 FQNSGLDKADMVHLVEEIERLGS 538


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 484 NAHSNSDHIKSTKSSFNSKITTLSTFSILIYGNIYC 591
           N   N   + ++   F + +  LSTFSI I    YC
Sbjct: 219 NELCNLCQVANSIYGFQNFLFVLSTFSICITQFYYC 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,587
Number of Sequences: 336
Number of extensions: 2904
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)