Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0092
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    39   3e-05
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   9.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 39.1 bits (87), Expect = 3e-05
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +2

Query: 20  TANTFKNMPGLMYLNVAGNNLSDMDPDTFXXXXXXXXXXXRNNHIKSLPDDIF 178
           T + F NMP L  L+++ N+L ++D DTF            +N I  +P+D+F
Sbjct: 264 TKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLF 316



 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 47/228 (20%), Positives = 91/228 (39%), Gaps = 2/228 (0%)
 Frame = +2

Query: 8   MQYITANTFKNMPGLMYLNVAGNNLSDMDPDTFXXXXXXXXXXXRNNHIKSLPDDIFSEN 187
           ++ +    F N+  L  LN+ GN ++ +  +TF             N I SL  +IF + 
Sbjct: 128 IESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQV 187

Query: 188 TELATLHLLKNPIDTVYGLQISDLLTLNAGQTNIKFVGPSMFNGMGLIANLNLSGNSIEK 367
             L   H+          +  + L+ L     ++ F   +   G+  I  L+LS N+I  
Sbjct: 188 GSLGMFHV---------NMSHNKLINLVVA-PSVPFEQDTGLGGLQNIKVLDLSFNNITS 237

Query: 368 IHNQAFHKLVEXXXXXXXXXXXXXMSSI--LIKENIELDIFKISNNPRLKHLPVEGFTCS 541
           +  Q F + VE             +++   L      L +  +S+N  L  L  + F  +
Sbjct: 238 VAKQ-FFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHN-SLYELDFDTFRNT 295

Query: 542 SDQFNIYFFGASDCGLEEIYDNSLKTFSALSIIHLSNNKLTTINNTVF 685
                + +   S   + EI ++  +    L I+  S+N+L ++ + +F
Sbjct: 296 K---KLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLPDNLF 340



 Score = 32.3 bits (70), Expect = 0.004
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
 Frame = +2

Query: 143 NNHIKSLPDDIFSENTELATLHLLKNPIDTVY-----GLQISDLLTLNAGQTNIKFVGPS 307
           NN ++++PD+ F     L  +HL  N I+ ++     G    DL  +     +++ V   
Sbjct: 51  NNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQH 110

Query: 308 MFNGMGLIANLNLSGNSIEKIHNQAFHKL 394
            F  +  +  ++L  N IE +  +AF  L
Sbjct: 111 TFADLIQLEQIHLDDNRIESLERRAFMNL 139



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 587 LEEIYDNSLKTFSALSIIHLSNNKLTTINNTVF 685
           L  + DNS     +L  +HL +N +  I+   F
Sbjct: 54  LRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTF 86



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +2

Query: 572 ASDCGLEEIYDNSLKTFSALSIIHLSNNKLTTINNTVF 685
           A    ++    +++K  + L  + LSNN+L  + +  F
Sbjct: 25  ALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSF 62


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 464 NIELDIFKISNNPRLKHLPVEGFTCSSDQFNIYF 565
           NI L + +   N R     +EG  CS  + N+ F
Sbjct: 175 NINLLLTEQLQNRRFFAKKMEGLVCSIKELNMIF 208


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 554 NIYFFGASDCGLEEIYDNSLK 616
           N+Y +   DC     Y +SLK
Sbjct: 283 NVYRYSCRDCSYATKYCHSLK 303


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 554 NIYFFGASDCGLEEIYDNSLK 616
           N+Y +   DC     Y +SLK
Sbjct: 41  NVYRYSCRDCSYATKYCHSLK 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,469
Number of Sequences: 336
Number of extensions: 2819
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)