Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0007
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   3.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.2  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   9.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.1  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.1  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 431 VMKAVGYLAVYRITFATCLFFLLMALIMIGVKS 529
           +++ VG  + Y +TF     FL++ L + G+ S
Sbjct: 276 LIRDVGNASGYTVTFLCLYLFLIITLTIYGLLS 308


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 162 PFLVFNSHFVLIVLSVLCTTIYIPSNKYLYFDII 61
           PF++F  HF+L         I +    Y Y+  I
Sbjct: 88  PFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFI 121


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 204 NTPAVLQNKGPTLHPFLVFNSHF 136
           N P +  + GP  HP+ V ++ +
Sbjct: 113 NVPPLTPSPGPPSHPYTVISNGY 135


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 452 LAVYRITFATCLFFLLMAL 508
           L+  R+   TCL FLL+AL
Sbjct: 59  LSPMRLIVQTCLDFLLLAL 77


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 625 SWDEECSDNATNNQ 584
           SW+  CS N+T++Q
Sbjct: 178 SWNNPCSINSTSSQ 191


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 493 KEETCCKCNSINSQISNRF 437
           KEE   KC    SQ+SN F
Sbjct: 263 KEELARKCGITVSQVSNWF 281


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 292 ISAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 194
           I+   RRE  E  +    +Q  +Q +  Q H+S
Sbjct: 71  INEQARREREEQERHKQQQQEKQQKIEQQTHSS 103


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 11  FNDKSKKSATEYFYV 55
           F+D++KK+ T Y Y+
Sbjct: 414 FSDENKKNLTPYTYL 428


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 292 ISAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 194
           I+   RRE  E  +    +Q  +Q +  Q H+S
Sbjct: 222 INEQARREREEQERHKQQQQEKQQKIEQQTHSS 254


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 292 ISAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 194
           I+   RRE  E  +    +Q  +Q +  Q H+S
Sbjct: 281 INEQARREREEQERHKQQQQEKQQKIEQQTHSS 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,616
Number of Sequences: 336
Number of extensions: 3709
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)