Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A23
         (841 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   4.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 222  WWRSRQLCGWLRHVVCE 172
            W + R++C W +   CE
Sbjct: 1137 WNKERKICDWPKSAKCE 1153


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +1

Query: 322 LKNIQAEEMVEFSSGLKGMALNLEPD 399
           +KN     +++F+ GLK + +++  D
Sbjct: 575 IKNFNIPSILQFNDGLKNLEIHVTKD 600


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 666 GXQRVNSLDTSLHRLTHRHPGND 598
           G  +VN   T  +  THRHP ++
Sbjct: 364 GVYQVNPTKTRTNLPTHRHPQDE 386


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 620 RTDTRGMIPGALIPTLIRDFVSI 552
           R  +RG+IP A + T+   FV +
Sbjct: 235 RASSRGLIPRAKVKTIKITFVIV 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,584
Number of Sequences: 336
Number of extensions: 4082
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)