BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_A07_e49_01.seq
         (1453 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   9.8  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   9.8  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 273 AFVMTIEEFNRVDILINNAGFMNDRLWE 356
           AFV  +++ N    ++ NA   N  LW+
Sbjct: 115 AFVFRLKQLNAKVEMLKNARVKNTALWK 142


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 395 YSPSVSIHGKGPRXSWRYHREHCFHSIRKASSLDA 499
           +SP       G   S+  H+EHC+  +R A   D+
Sbjct: 19  WSPDTLAKNLGINSSF-VHKEHCYVLVRLARFRDS 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,067
Number of Sequences: 336
Number of extensions: 3183
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 43325775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)