Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10454
(824 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 69 6e-13
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 64 2e-11
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 55 1e-08
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 48 1e-06
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 48 2e-06
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 46 9e-06
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 33 0.049
SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces po... 31 0.15
SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|ch... 28 1.8
SPBC106.05c |tim11||F0-ATPase subunit E|Schizosaccharomyces pomb... 28 1.8
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 27 3.2
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 27 3.2
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 27 4.3
SPBP8B7.03c |rpl402|rpl4-2, rpl4|60S ribosomal protein L2|Schizo... 27 4.3
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 4.3
SPBC1711.06 |rpl401|rpl4-1, rpl4|60S ribosomal protein L2|Schizo... 26 7.5
SPAC328.07c |||heavy metal ion homeostasis protein |Schizosaccha... 26 7.5
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 26 7.5
SPAC977.14c |||aldo/keto reductase, unknown biological role|Schi... 26 7.5
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 9.9
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 25 9.9
SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit T... 25 9.9
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 69.3 bits (162), Expect = 6e-13
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
+ED+VG IK E V R+D++VT+KLW H EAV AL K+LK+L LDY++ YLI
Sbjct: 62 NEDEVGDGIK----ESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLI 117
Query: 432 HWPIA 446
HWP++
Sbjct: 118 HWPVS 122
Score = 55.6 bits (128), Expect = 8e-09
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVV 682
+++L G + IG+SNFN LER+ V P+V Q+E++ L Q+ ++ K GI V
Sbjct: 153 EKLLETGKVRHIGLSNFNDTNLERILKVAKVKPAVHQMELHPFLPQTEFVEKHKKLGIHV 212
Query: 683 VAYTPFGN 706
AY+PFGN
Sbjct: 213 TAYSPFGN 220
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 103 LNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
L +G +IPG G+GTW + ++ + +V+ A+ GYRHID AAIY
Sbjct: 18 LADGSKIPGLGLGTWRS------EPNQTKNAVKTALQYGYRHIDAAAIY 60
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 64.5 bits (150), Expect = 2e-11
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Frame = +3
Query: 228 YRHCGNLLHEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDL 407
YRH + H + I + I E V R D++VT+KLW H+ V AL K+L++L+L
Sbjct: 50 YRHI-DTAHIYGNEKEIGEGIRESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNL 108
Query: 408 DYVNLYLIHWPIAL---------HENASISQTD--YVETWQAMTE 509
+Y++ YLIHWP AL +E + D ETWQAM E
Sbjct: 109 EYIDAYLIHWPFALLSGPEELPRNEKGELIYEDVPIEETWQAMEE 153
Score = 46.0 bits (104), Expect = 7e-06
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVV 682
+ +L G + IG+SNFN + L+R+ V P++ Q+E++ L Q+ L+ K I V
Sbjct: 152 EELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTIHQMELHPYLPQTEYLEKHKKLQIHV 211
Query: 683 VAYTPFGN 706
AY+P N
Sbjct: 212 SAYSPLAN 219
Score = 45.6 bits (103), Expect = 9e-06
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +1
Query: 103 LNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
L NG +IP G+GTW DE + +V A+ AGYRHIDTA IY
Sbjct: 17 LPNGDKIPSIGLGTWRSGK------DETKNAVCAALKAGYRHIDTAHIY 59
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSA--LLDYCKAQGI 676
+ L GL S+GVSNF I LE L +TP V Q+E + + ++A L+++C+++GI
Sbjct: 129 ETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKPLVEFCQSKGI 188
Query: 677 VVVAYTPFGNL 709
+V Y P L
Sbjct: 189 IVEGYGPLSPL 199
Score = 49.2 bits (112), Expect = 7e-07
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
+E++VG A+K E V R LF+T+K+ H + + AL +SL+ L DY++LYL+
Sbjct: 56 NEEEVGVALK----EANVPRSKLFITSKVM---HNVDNIPEALNESLRKLGTDYLDLYLL 108
Query: 432 HWPIALHENASISQTDYVETWQAM 503
H PI +E + E W+AM
Sbjct: 109 HSPIPFYE----KKIPISEGWKAM 128
Score = 33.5 bits (73), Expect = 0.037
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 121 IPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTRTRSDVPLR 282
+P +G+GT L + SV+ A+ AG+ HID A +Y V L+
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK 65
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQL-ERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIV 679
++ + +G ++IGVSNF + E L S + P V Q+E++ Q ++DYC+++GI
Sbjct: 125 EKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQIELHPFCSQQKVVDYCESKGIQ 184
Query: 680 VVAYTP 697
+ AY P
Sbjct: 185 LAAYAP 190
Score = 44.4 bits (100), Expect = 2e-05
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +3
Query: 228 YRHCGN--LLH-EDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH + + H E GRAI K + E KRED++ T+KL N ++ L ++ S+K
Sbjct: 41 YRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKA 99
Query: 399 LDLDYVNLYLIHWPIALHENASISQTDYVETWQAM 503
L Y++L+L+H P D +E+W+A+
Sbjct: 100 CGLGYIDLFLLHSPYG----------DRIESWKAL 124
Score = 36.3 bits (80), Expect = 0.005
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +1
Query: 85 LAPVLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
L +KLNNG + P F G+++ N K + SV A+ GYRHID+A +Y
Sbjct: 2 LGSFVKLNNGLKCPQFAYGSYM---VNRTKCFD---SVYAALQCGYRHIDSAQMY 50
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 48.0 bits (109), Expect = 2e-06
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +2
Query: 518 QGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTP 697
+G IGVSN+NI LE + S G P++ QVE + + L YC GI+V A++P
Sbjct: 131 EGRINKIGVSNYNIHHLEEIISLGLPLPAINQVEFSAFNNRPTFLSYCFNHGILVQAFSP 190
Score = 29.1 bits (62), Expect = 0.80
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGV-VKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYL 428
+E + +AI+ + V +KRED+ + TK+ ++ E A+ +SL+ +++ L
Sbjct: 49 NEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQGFERTWKAVEQSLRRTGRPKLDVVL 108
Query: 429 IH---WPI 443
IH WP+
Sbjct: 109 IHSPKWPV 116
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 45.6 bits (103), Expect = 9e-06
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQLERL-KSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIV 679
+ ++ G +S+GVSN+ ++ L+ L S P V Q+E++ L Q ++ YC++ I
Sbjct: 132 EEFVDSGDIRSVGVSNYGVKHLQELYASNPKFYPCVNQIELHPFLSQDDIVKYCQSHDIA 191
Query: 680 VVAYTPFGNLFNRQPSAPAPRADDQRLVPSPK 775
+ AY+P + R +D++LVP K
Sbjct: 192 IEAYSPLTH---------GIRLNDEKLVPIAK 214
Score = 42.7 bits (96), Expect = 6e-05
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +1
Query: 67 LSLSAGLAPVLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAI 246
+S S + + L NG IP G G ++ LK +E V A+D+GYRHIDTAA+
Sbjct: 1 MSESQTESTTVTLTNGMVIPRIGFGAFM------LKYNECYGLVTQALDSGYRHIDTAAV 54
Query: 247 Y 249
Y
Sbjct: 55 Y 55
Score = 38.3 bits (85), Expect = 0.001
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +3
Query: 228 YRHCGNLL---HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH +ED G+AI + VKR D+F+T+KL N + + A+R SL +
Sbjct: 46 YRHIDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKLANCS-DYYSTRAAIRSSLHH 104
Query: 399 LDLDYVNLYLIHWPIALHENASISQTDYVETWQAMTE 509
L Y++L+LI P + + +W+AM E
Sbjct: 105 LG-TYIDLFLIQSPAG-------GKKSRIASWKAMEE 133
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 33.1 bits (72), Expect = 0.049
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +1
Query: 109 NGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTRTRSDVPLRRR 288
+G ++ F +G WL + + + ++ A D G DTA IYS V +
Sbjct: 21 SGLKVSAFSLGGWLTYGNEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAI 80
Query: 289 SQREWSREK 315
+ W R +
Sbjct: 81 KELGWDRSE 89
Score = 30.3 bits (65), Expect = 0.35
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 255 EDQVGRAIKK---KIAEGVVKREDLF-VTTKLWNTNH-KKEAVLPALRKSLKNLDLDYVN 419
E +G+AIK+ +E V+ + F TKL NT ++ ++ L SLK L L YV+
Sbjct: 73 ETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVD 132
Query: 420 LYLIHWP 440
+ + H P
Sbjct: 133 VIMAHRP 139
>SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 31.5 bits (68), Expect = 0.15
Identities = 15/66 (22%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 512 LNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINL---NLQQSALLDYCKAQGIVV 682
++ G +G+S + + ++R + V + ++VE +L +++ + ++D C+ I +
Sbjct: 142 VDSGKISCVGLSEVSAETIKR--AHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPI 199
Query: 683 VAYTPF 700
+AY+PF
Sbjct: 200 IAYSPF 205
>SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 333
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/66 (22%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 512 LNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINL---NLQQSALLDYCKAQGIVV 682
++ G +G+S + + ++R + V + ++ E +L +++++ +LD C I +
Sbjct: 142 VDSGEISCVGLSEASAESIKRALAI--VPIAAVETEYSLFSRDIEKNGILDTCTQLSIPI 199
Query: 683 VAYTPF 700
+AY PF
Sbjct: 200 IAYAPF 205
>SPBC106.05c |tim11||F0-ATPase subunit E|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 96
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLW-----NTNHKKEAVLPALRKSLKNLDLD 410
H + +K+I E ++E L + K+ NT K++++LP L+K ++ D+D
Sbjct: 29 HRSHIQCQKQKEIDENYHRQESLIESAKIAYLNTKNTPPKEDSMLPNLKKDSEDFDMD 86
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 348 NHKKEAVLPALRKSLKNLDLDYVNLYLIH 434
N++ + + AL SLK L +D ++LY +H
Sbjct: 98 NNEPDYIEKALDLSLKRLGIDCIDLYYVH 126
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 205 AIDAGYRHIDTAA-IYSTRTRSDVPLRRRSQREWSREKICSSLQSYGXXXXXXXXFCRPS 381
A+D ++ + TAA + R ++ RRS+REWS KI ++ +CR
Sbjct: 617 ALDTLFKKLPTAAPVLLKRIKTKDQEWRRSKREWS--KIWRQIEKKNAQAAFDDRYCRIE 674
Query: 382 G 384
G
Sbjct: 675 G 675
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 279 KKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLK 395
KKK+A + ++ L + L N K ++ + +KSLK
Sbjct: 609 KKKLASALASQDQLVLENALHFVNPPKRGIIVSKKKSLK 647
>SPBP8B7.03c |rpl402|rpl4-2, rpl4|60S ribosomal protein
L2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.6 bits (56), Expect = 4.3
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +2
Query: 302 GQERRSVRHYKAMEHEPQEGGGFAGPQEIIEEFGFGLRESIFNSLADRSARKRLNF-PNR 478
G E +VR ++ P GG G I + FGL +S+F S + + K+ F P
Sbjct: 226 GVEIVNVRRLNLLQLAP---GGHLGRFVIWTKSAFGLLDSVFGSTTEAAQLKKNYFLPEN 282
Query: 479 LRGDVASYDRVLN----QGLTKSIG---VSNFNIQQLERLKSE 586
+ + A R++N Q + K+ G V ++Q+ LK++
Sbjct: 283 IISN-ADVTRLINSDEIQSIVKAAGPSRVKRAHVQKKNPLKNK 324
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 26.6 bits (56), Expect = 4.3
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +3
Query: 429 IHWPIALHENASISQTDYVETWQAMTE 509
+H+P +L++ + IS+ Y+ +W+ +E
Sbjct: 38 VHYPDSLNDLSEISKNLYISSWKTASE 64
>SPBC1711.06 |rpl401|rpl4-1, rpl4|60S ribosomal protein
L2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 25.8 bits (54), Expect = 7.5
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +2
Query: 302 GQERRSVRHYKAMEHEPQEGGGFAGPQEIIEEFGFGLRESIFNSLADRSARKRLNF-PNR 478
G E +VR ++ P GG G I + FGL +S+F S + + K+ F P
Sbjct: 226 GVEIVNVRRLNLLQLAP---GGHLGRFVIWTKSAFGLLDSVFGSTTEVAQLKKNYFLPEN 282
Query: 479 LRGDVASYDRVLN----QGLTKSIG---VSNFNIQQLERLKSE 586
+ + A R++N Q + K+ G V ++Q+ LK++
Sbjct: 283 IISN-ADVTRLINSDEIQSIVKAAGPSRVKRAHVQKKNPLKNK 324
>SPAC328.07c |||heavy metal ion homeostasis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 277
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 442 SLCTKTPQFPKQITWRRGKL*PSLEPGSDQVHWGVQLQHSAAGEAQV*G 588
S+ T P+FP+ + R +L + EP D V + ++ A + G
Sbjct: 9 SIHTPIPEFPENRSTNRSELAAAFEPPDDDVEYSETAPLYSSARASIEG 57
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 345 TNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
+NH+K+ L A+ K+L +VN YLI
Sbjct: 1283 SNHEKQMALVAMNAPSKSLYQKFVNDYLI 1311
>SPAC977.14c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 178 DEVQKSVEWAIDAGYRHIDTAAIYS 252
+EV K ++ A DAG R DTA YS
Sbjct: 44 EEVFKIMKAAYDAGIRTFDTANCYS 68
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 9.9
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +2
Query: 560 QQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVV-AYTPFGNLFNRQPSAPA 736
++L L+ E S Q N + + S L Y Q I L+ + A
Sbjct: 526 EELRSLEEESIKESSATQQNENQHKRSSRKLLYEDKQAIQEAHTINTKRKLWPQSTLIQA 585
Query: 737 PRADDQRLVPSPKNTRK 787
P +DD+ VPSP +K
Sbjct: 586 PNSDDEENVPSPSPKKK 602
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 699 SAICSTASRRLQRRGPTTSVSCH 767
S +C++ASR+ ++ +S+SCH
Sbjct: 417 SGVCTSASRQCKKLTNFSSLSCH 439
>SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit
Tfb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 477
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 681 WWRTPPSAICSTASRRLQRRGPTTSVSCHRPKIQENR 791
+W T + + A R Q+RGP +S +PK +N+
Sbjct: 101 FWSTRLHLLRAHAVERSQQRGPYNVLSTIKPKTVDNQ 137
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,507,541
Number of Sequences: 5004
Number of extensions: 73684
Number of successful extensions: 260
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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