Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10436
(720 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.15 |hhp1||serine/threonine protein kinase Hhp1|Schizosac... 75 8e-15
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 69 5e-13
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 54 2e-08
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos... 51 2e-07
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 50 3e-07
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 27 3.6
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 27 3.6
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 26 4.7
SPBC8D2.15 |||mitochondrial lipoic acid synthetase |Schizosaccha... 26 4.7
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 6.2
SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr... 26 6.2
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 6.2
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 26 6.2
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 25 8.2
SPBC2G2.06c |apl1||AP-2 adaptor complex subunit Apl1 |Schizosacc... 25 8.2
>SPBC3H7.15 |hhp1||serine/threonine protein kinase
Hhp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 75.4 bits (177), Expect = 8e-15
Identities = 38/101 (37%), Positives = 57/101 (56%)
Frame = +2
Query: 8 PIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFGGLRDNHQT 187
P EF +YL Y R LRF+++PDYA+LR+LFR LF RQ + +DY+FDW + + HQ
Sbjct: 247 PQEFSIYLNYTRSLRFDDKPDYAYLRKLFRDLFCRQSYEFDYMFDWTLKRKTQQDQQHQ- 305
Query: 188 SGIDRALRRLEQNQEQENTAATAASPVMQWQQFRNGGEERY 310
+Q Q+Q + A +P + FRN ++ +
Sbjct: 306 ----------QQLQQQLSATPQAINPPPERSSFRNYQKQNF 336
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 69.3 bits (162), Expect = 5e-13
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2
Query: 8 PIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKF 160
P EF Y+ Y R+L F E+P+YA+LR+LFR L R+G+ YDYVFDW +LK+
Sbjct: 246 PEEFITYMCYTRQLSFTEKPNYAYLRKLFRDLLIRKGYQYDYVFDWMILKY 296
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 54.4 bits (125), Expect = 2e-08
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 8 PIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFG 163
P EF Y+ Y R L F+E PDYA L++LF + G T D V+DW +L G
Sbjct: 250 PNEFSKYMTYVRSLEFDEEPDYAFLQELFDDVLRANGDTNDGVYDWMLLNDG 301
>SPBC1347.06c |cki1||serine/threonine protein kinase
Cki1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 50.8 bits (116), Expect = 2e-07
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +2
Query: 8 PIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFG 163
P EF Y+ Y R L F+ PDY +L+ LF + R T D FDWN+L G
Sbjct: 250 PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLLNNG 301
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 50.4 bits (115), Expect = 3e-07
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2
Query: 5 HPIEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFG 163
+P EF Y+ Y R L +EE PDY +LR LF +L R T D +DW +L G
Sbjct: 252 YPKEFLQYMIYARNLGYEEAPDYDYLRSLFDSLLLRINETDDGKYDWTLLNNG 304
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 439 SAEASLYFHCHNYVCVRYILRH 374
S ++ FH H VC Y++RH
Sbjct: 316 SCSLNIVFHKHKKVCTYYMIRH 337
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 194 IDRALRRLEQNQEQENTAATAASPVMQW-QQFRNGGEERYR*LHADNISLKA 346
+D L LE ++EQ + ++++ ++ RN EER L + N +LKA
Sbjct: 376 LDDILTTLESDREQLRRHEEHSQKLLKFIEEIRNDYEERIHALESQNSALKA 427
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -2
Query: 404 LCLCKVHSATQNILVTNTNVLLERCYQREVSGISPHRHSEIAATAL 267
L LCK+ + ++ V+ N + CY ++ + R+ +I AT L
Sbjct: 1989 LQLCKIMGGSVSVEVSQNNPTFKICYDLKIHELGKERY-DIIATPL 2033
>SPBC8D2.15 |||mitochondrial lipoic acid synthetase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 250 DSGQPSNAVAAISEWR*GEIPLTS 321
D +P N AI +W G I LTS
Sbjct: 150 DPNEPENTAEAIKQWNLGYIVLTS 173
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.8 bits (54), Expect = 6.2
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 IEFQLYLKYCRRLRFEERPDYAHLRQLFRTLFHRQGFTYDYVFDWNMLKFGGLRDNHQTS 190
I+ + L R L +RP L+ R L HRQ + F N + N+ T
Sbjct: 214 IDEESKLASLRNLNINDRPPLPVLKNSERNLLHRQLLSNHPFFSQNNVSLSTNSKNYSTD 273
Query: 191 GID-RALRRLEQNQEQENTAAT 253
++ L QN++Q + T
Sbjct: 274 FTKIQSDSSLLQNRQQNHRIET 295
>SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -3
Query: 142 IKHVVICKSLPVEE-GAKQLTQM 77
+ H++ICK PV E G K L+++
Sbjct: 505 LSHIIICKIFPVTECGEKMLSEV 527
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 104 FHRQGFTYDYVFDWNMLKFGGLRDNHQTSGIDRALRRLEQNQEQE 238
+ R +++DY ++W+ L+ + ID A R E+ +E+E
Sbjct: 69 YERASYSHDYGYEWDYLEDLERHVDDCNKRIDIAEARREKTKEEE 113
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 83 ADGRSRVSPQNEVAGSTSNTVETQLD 6
A+GRS P VAG T++ E +LD
Sbjct: 294 ANGRSAPCPAGNVAGMTTSLREVKLD 319
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 8.2
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +2
Query: 167 LRDNHQTSGIDRALRRLEQNQEQENTAATAASPVMQWQQFRNGGE 301
L H G DRA+ L + + ++ PV+++ + N G+
Sbjct: 594 LGQGHLKHGFDRAIEHLSSFDPRRDFSSNTVEPVVKFLELINVGD 638
>SPBC2G2.06c |apl1||AP-2 adaptor complex subunit Apl1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 677
Score = 25.4 bits (53), Expect = 8.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 398 LCKVHSATQNILVTNTNVLLERC 330
L + SATQ +++ N ++LE+C
Sbjct: 291 LARKSSATQYVILRNIQIILEQC 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,869,838
Number of Sequences: 5004
Number of extensions: 56669
Number of successful extensions: 139
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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