BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0253.Seq (889 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces po... 59 1e-09 SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.072 SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.095 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.095 SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 31 0.17 SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 31 0.22 SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.38 SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.88 SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.88 SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.2 SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.2 SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 26 8.2 >SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 298 Score = 58.8 bits (136), Expect = 1e-09 Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%) Frame = +1 Query: 268 VCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRP-NVGQ 444 V FD+DST+IQ E IDELA G EV +T+ AM G + FQE+L++R+ +++ +V Sbjct: 79 VVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDFQESLRRRVSLLQGLSVDV 138 Query: 445 IREFIEKFPVRLTPGITEL 501 I + I K + TPG +L Sbjct: 139 INKVIGK--ITFTPGAKQL 155 >SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 317 Score = 32.7 bits (71), Expect = 0.072 Identities = 30/108 (27%), Positives = 55/108 (50%) Frame = -3 Query: 482 VSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPS 303 +S +G S S+ +G SS +F S + P +S+ S +SSP + SSS Sbjct: 121 LSYSGTISSTSIAPSMIGTRTSSSYFITS-SSSTP--SSSSSSSSSSPSSSSSKSSSSSK 177 Query: 302 SCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAGCFSN 159 S + S+SK + S+ ++ +S ++S S + S+S+++ FS+ Sbjct: 178 SSSSSSSSSKSSSSS--SSSSKSSSSSSSSSKSSASPSSSKSSSKFSS 223 Score = 31.1 bits (67), Expect = 0.22 Identities = 19/69 (27%), Positives = 39/69 (56%) Frame = -3 Query: 350 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAG 171 +S+P + +SSS PSS + S+S ++ S+ ++ S ++S + +SS+S+++ Sbjct: 151 SSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSA 210 Query: 170 CFSNCKEPS 144 S+ K S Sbjct: 211 SPSSSKSSS 219 >SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 534 Score = 32.3 bits (70), Expect = 0.095 Identities = 33/110 (30%), Positives = 56/110 (50%) Frame = -3 Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNL 324 T+S P VS T + + +S PT S L + + P +S+ S LTSS +L Sbjct: 182 TSSSQPSVSSTSSSTFSSAA-PT-STSSSYLSSSSVVSSSSSPSSSSSSTLTSS----SL 235 Query: 323 ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTA 174 ++SS+PS+ + STS S+ ++ S ++S + +SS+S T+ Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTS 285 Score = 29.1 bits (62), Expect = 0.88 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 3/109 (2%) Frame = -3 Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVS-LLTSSPFPQN 327 + S IP S + + + +SL + SS +S ++I +S+ S TSS + Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSS--SSSSSIISSSSSSSSSPTSTSSTISSS 293 Query: 326 LASSSMP-SSCMTVESTSKQTQSAV*TTPGQSVGATSR-*STPVRASST 186 +SSS P S+ T+ S+S + S T S+ ++S S+P +SST Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSST 342 Score = 28.3 bits (60), Expect = 1.5 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Frame = -3 Query: 419 SSLFFKASWNVILPPIASAVSLLTSSPFPQNLASS--SMPSSCMTVESTSKQTQSAV*TT 246 SS +S + P S+ S TSS + +SS S SS ++ S+S + S+ +T Sbjct: 227 SSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTST 286 Query: 245 PGQSVGATSR*STPVRASSTSRTAGCFSN 159 ++S S+P SST ++ S+ Sbjct: 287 SSTISSSSSSSSSPTSTSSTISSSSSSSS 315 Score = 27.1 bits (57), Expect = 3.6 Identities = 33/117 (28%), Positives = 57/117 (48%) Frame = -3 Query: 509 PFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQ 330 P T+S +S + + S P++ SS F A+ P +++ S L+SS Sbjct: 169 PLTSSTFSSLSSSTSSSQ-----PSVSSTSSSTFSSAA------PTSTSSSYLSSSSV-- 215 Query: 329 NLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAGCFSN 159 ++SSS PSS + TS ++ + P S ++S S+ + +SS+S TA S+ Sbjct: 216 -VSSSSSPSSSSSSTLTSSSLSTS--SIPSTSSSSSST-SSSLSSSSSSSTASSSSS 268 Score = 26.6 bits (56), Expect = 4.7 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Frame = -3 Query: 368 SAVSLLTSSPFPQNL---ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVR 198 S+ S +SSP + +SSS PSS +TS S+ ++ S +TS + Sbjct: 327 SSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSS 386 Query: 197 ASSTSRTAGCFSN 159 +SS+SR A S+ Sbjct: 387 SSSSSRPASSSSH 399 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 32.3 bits (70), Expect = 0.095 Identities = 32/109 (29%), Positives = 53/109 (48%) Frame = -3 Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNL 324 T++ IP G+ S+++ I PT+ +S S ++ +PP +++ + SSP P Sbjct: 174 TSTSIPPTG--GSSSLSTPITPTVPPTSTS-----STSIPIPPTSTSSTDTNSSPLPTTS 226 Query: 323 ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRT 177 S + +S T S+S T TP +TS S P+ +STS T Sbjct: 227 TSCTTSTSIPTGGSSSLSTP----ITPTVPPTSTSSTSIPIPPTSTSST 271 Score = 31.9 bits (69), Expect = 0.13 Identities = 26/99 (26%), Positives = 45/99 (45%) Frame = -3 Query: 470 GNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMT 291 G+ S+++ I PT+ +S S ++ +PP +++ + SSP P S + +S Sbjct: 239 GSSSLSTPITPTVPPTSTS-----STSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTS--- 290 Query: 290 VESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTA 174 + T T T P S +TS P SST ++ Sbjct: 291 IPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSS 329 Score = 29.9 bits (64), Expect = 0.51 Identities = 27/106 (25%), Positives = 48/106 (45%) Frame = -3 Query: 503 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNL 324 T++ IP G+ S+++ I PT+ +S S ++ +PP +++ + S+P P Sbjct: 117 TSTSIPPTG--GSSSLSTPITPTVPPTSTS-----STSIPIPPTSTSSTDTNSNPLPTTS 169 Query: 323 ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASST 186 S + +S +S + T P S +TS P SST Sbjct: 170 TSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSST 215 Score = 29.9 bits (64), Expect = 0.51 Identities = 19/69 (27%), Positives = 30/69 (43%) Frame = -3 Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV 201 PP +++ + +SSP P S + +S + T T T P S +TS P Sbjct: 318 PPASTSSTGTSSSPLPSTSTSCTTSTS---IPPTGNSTTPVTPTVPPTSTSSTSTPPPPA 374 Query: 200 RASSTSRTA 174 SST ++ Sbjct: 375 STSSTGTSS 383 Score = 29.5 bits (63), Expect = 0.67 Identities = 19/69 (27%), Positives = 37/69 (53%) Frame = -3 Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV 201 PP S S T+S F + + SS+P++ V++ S + + + T S ++S TP Sbjct: 693 PPTTSFPSTFTTS-FITSSSLSSIPNNSTEVKTASTSSGTEIKTASTSSGSSSSSSYTPA 751 Query: 200 RASSTSRTA 174 ++ST+ ++ Sbjct: 752 SSTSTTTSS 760 Score = 27.5 bits (58), Expect = 2.7 Identities = 17/76 (22%), Positives = 36/76 (47%) Frame = -3 Query: 383 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STP 204 +PP ++ + +T + P + ++ ++C T S T + V +TP + T+ S P Sbjct: 399 IPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVP-YTSTPVTSTPLATTNCTTSTSVP 457 Query: 203 VRASSTSRTAGCFSNC 156 ++ + T +NC Sbjct: 458 YTSTPVTSTPLTTTNC 473 Score = 26.6 bits (56), Expect = 4.7 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = -3 Query: 380 PPIASAVSLLTSSPFPQNLASSSMPSSCM-TVESTSKQTQSAV*TTPGQSVGATSR*STP 204 P ++ S TS+ P SSS+ + TV TS T S P S +T S+P Sbjct: 164 PLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTS--TSSTSIPIPPTSTSSTDTNSSP 221 Query: 203 VRASSTSRT 177 + +STS T Sbjct: 222 LPTTSTSCT 230 >SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||Manual Length = 3971 Score = 31.5 bits (68), Expect = 0.17 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Frame = -3 Query: 377 PIASAVSLLTSSPFPQN-LASSSMPSSCMTV--ESTSKQTQSAV*TTPGQSVGATSR*ST 207 PI S+ +L TS+P + + +SS P + TV ST + +A+ T+P + ST Sbjct: 1607 PITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSST 1666 Query: 206 PVRASSTSRTA 174 P+ +S+ T+ Sbjct: 1667 PITSSTVVNTS 1677 >SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosaccharomyces pombe|chr 2|||Manual Length = 948 Score = 31.1 bits (67), Expect = 0.22 Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = -3 Query: 326 LASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATS-R*STPVRASSTSRTA 174 L SSS+ ++ EST +T+S+ + P Q++ ++S STPV +S+S ++ Sbjct: 237 LESSSLTNTVSPTESTFYETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTSS 288 Score = 25.8 bits (54), Expect = 8.2 Identities = 29/112 (25%), Positives = 47/112 (41%) Frame = -3 Query: 524 SSFV*PFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTS 345 SSF +S SL+ N + + +L SS S +++ +SA+S S Sbjct: 534 SSFPTTIVSSSFQYSSLSSNVTTTNAQSSSLSSSNSSALTHISSSIVSSGSSSALS---S 590 Query: 344 SPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASS 189 S ++ SSS S + TT SVG T+ +TPV +++ Sbjct: 591 STIVSSINSSSSVFISSVSSSLQYSSSYVTETTTSGSVGFTTTIATPVGSTA 642 >SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 374 Score = 30.3 bits (65), Expect = 0.38 Identities = 24/76 (31%), Positives = 40/76 (52%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192 +S+VS TSS +SSS PSS T +TS + S+ ++ S ++S S+ +S Sbjct: 129 SSSVSSTTSS------SSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSS 182 Query: 191 STSRTAGCFSNCKEPS 144 S+S ++ S+ S Sbjct: 183 SSSSSSSSSSSSSSSS 198 Score = 28.3 bits (60), Expect = 1.5 Identities = 18/63 (28%), Positives = 35/63 (55%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192 +S+ + T+SP + +SSS SS + S+S + S+ ++ S ++S S+ +S Sbjct: 145 SSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 204 Query: 191 STS 183 S+S Sbjct: 205 SSS 207 Score = 27.5 bits (58), Expect = 2.7 Identities = 16/64 (25%), Positives = 35/64 (54%) Frame = -3 Query: 350 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAG 171 +SSP + +++ PSS + S+S + S+ ++ S ++S S+ +SS+S ++ Sbjct: 141 SSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 200 Query: 170 CFSN 159 S+ Sbjct: 201 SSSS 204 >SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 670 Score = 29.1 bits (62), Expect = 0.88 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = -3 Query: 419 SSLFFKASWNVILPPIAS---AVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*T 249 SS ++ S ++I+P S +VS +SSP P + S + S + E T+ TQ T Sbjct: 507 SSPYYSNS-SIIVPTTVSTSGSVSSFSSSPSPTSSFSGTSALSSSSNEETTTTTQVTYTT 565 Query: 248 TPGQSVGATSR*STPVRASSTSRTAGCFSNCKE 150 +P ++ + + R T T S E Sbjct: 566 SPEETTTTMTTTTCSSRPEETISTVSTTSTVSE 598 >SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 1036 Score = 29.1 bits (62), Expect = 0.88 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRA- 195 AS+ L + S A+S+ + +V ST+ + S+ T S ATS STP+ + Sbjct: 319 ASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSV 378 Query: 194 SSTSRTA 174 +STS T+ Sbjct: 379 NSTSATS 385 Score = 28.3 bits (60), Expect = 1.5 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV-RA 195 A++ S S A+S+ + +V ST+ + S+ T S ATS STP+ A Sbjct: 335 ATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSA 394 Query: 194 SSTSRTA 174 +ST+ T+ Sbjct: 395 NSTTSTS 401 Score = 28.3 bits (60), Expect = 1.5 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPV-RA 195 A++ S S A+S+ + +V ST+ + S+ T S ATS STP+ A Sbjct: 449 ATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSA 508 Query: 194 SSTSRTA 174 +ST+ T+ Sbjct: 509 NSTTSTS 515 Score = 27.9 bits (59), Expect = 2.0 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = -3 Query: 407 FKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVEST--SKQTQSAV*TTP-GQ 237 + +S +L ++ + TSS +L SSS SS +T S+ S T S +P Sbjct: 48 YLSSVPTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSS 107 Query: 236 SVGATSR*STPVRASSTSRTA 174 S+ ++S S+ + +SST+ ++ Sbjct: 108 SLTSSSATSSSLASSSTTSSS 128 Score = 27.5 bits (58), Expect = 2.7 Identities = 19/66 (28%), Positives = 37/66 (56%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRAS 192 +S S ++SP +L SSS SS + ST+ + ++ T S+ ++S S+ + +S Sbjct: 94 SSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSIT-SSSLASSSITSSSLASS 152 Query: 191 STSRTA 174 ST+ ++ Sbjct: 153 STTSSS 158 Score = 27.5 bits (58), Expect = 2.7 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRA- 195 A++ S S A+S+ + +V ST+ + S+ T S ATS STP+ + Sbjct: 433 ATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSV 492 Query: 194 SSTSRTA 174 +STS T+ Sbjct: 493 NSTSATS 499 Score = 27.5 bits (58), Expect = 2.7 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STP---- 204 ++A S TSS P + SS+ SS ST+ + S+ T S ATS STP Sbjct: 518 STAPSYNTSSVLPTSSVSSTPLSSA---NSTTATSASSTPLTSVNSTTATSASSTPFGNS 574 Query: 203 VRASSTSRTAGCFSN 159 SS S + G F+N Sbjct: 575 TITSSASGSTGEFTN 589 Score = 26.6 bits (56), Expect = 4.7 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRA- 195 AS+ L + + ASS+ SS + ST+ + S+ + S ATS STP+ + Sbjct: 303 ASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSV 362 Query: 194 SSTSRTA 174 +ST+ T+ Sbjct: 363 NSTTATS 369 Score = 26.2 bits (55), Expect = 6.2 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = -3 Query: 386 ILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*ST 207 +LP + + + L+S+ ++SS P S +V ST+ + S+ + S ATS ST Sbjct: 414 VLPTSSVSSTPLSSANSTTATSASSTPLS--SVNSTTATSASSTPLSSVNSTTATSASST 471 Query: 206 PVRA-SSTSRTA 174 P+ + +ST+ T+ Sbjct: 472 PLTSVNSTTATS 483 Score = 25.8 bits (54), Expect = 8.2 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -3 Query: 371 ASAVSLLTSSPFPQNL-ASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRA 195 AS+ SL +SS +L +SSS+ SS +++ T S++ ++ S S +T Sbjct: 70 ASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSL 129 Query: 194 SSTSRTAGCFSN 159 +S+S T+ ++ Sbjct: 130 ASSSITSSSLAS 141 >SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 349 Score = 26.2 bits (55), Expect = 6.2 Identities = 18/63 (28%), Positives = 30/63 (47%) Frame = -3 Query: 332 QNLASSSMPSSCMTVESTSKQTQSAV*TTPGQSVGATSR*STPVRASSTSRTAGCFSNCK 153 + ASSS SS + S T S+ TP + ++S S+ +SS S ++ S+ + Sbjct: 112 EGAASSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSR 171 Query: 152 EPS 144 S Sbjct: 172 SSS 174 >SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 262 Score = 25.8 bits (54), Expect = 8.2 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = -3 Query: 377 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV--*TTPGQSVGATSR*STP 204 PI+S+++ SS +++SSS SS ++ S +T SA T G S TS S+ Sbjct: 166 PISSSITSSISSSASSSVSSSS-ASSSGSISSADAKTVSASSNSTISGFSTSTTSASSSA 224 Query: 203 VRASSTS 183 SS+S Sbjct: 225 AGNSSSS 231 >SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces pombe|chr 2|||Manual Length = 596 Score = 25.8 bits (54), Expect = 8.2 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 2/25 (8%) Frame = -3 Query: 395 WNVILPPIASAVSLLTSSPF--PQN 327 WN++LP + +A+ ++ F PQN Sbjct: 445 WNLVLPSVGAAIKIVVHGQFEEPQN 469 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,403,897 Number of Sequences: 5004 Number of extensions: 67531 Number of successful extensions: 275 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 217 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 265 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 446488370 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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