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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b12f
         (397 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    29   0.20 
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    28   0.46 
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch...    28   0.60 
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po...    27   1.4  
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|...    27   1.4  
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo...    27   1.4  
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp...    25   4.3  
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl...    25   4.3  
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|...    25   5.6  
SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual    25   5.6  
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo...    24   7.4  
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi...    24   7.4  
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe...    24   7.4  
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    24   7.4  
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po...    24   7.4  
SPCC126.05c |mrpl17||mitochondrial ribosomal protein subunit L17...    24   9.8  
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac...    24   9.8  
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p...    24   9.8  
SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr 3|...    24   9.8  

>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1367

 Score = 29.5 bits (63), Expect = 0.20
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 298 NFLRYSLLPTASTRERGRLEVRSALGRVHVICTVVDRFV 182
           NF    ++P  STR+R  + +R   G +H+IC   D  +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794


>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 557

 Score = 28.3 bits (60), Expect = 0.46
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = +2

Query: 158 DYNPNG-NGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 262
           DYN N  N Y PI N  Y+++   G    PYF     PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157


>SPBC21D10.06c |map4||cell agglutination protein
           Map4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 948

 Score = 27.9 bits (59), Expect = 0.60
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +3

Query: 111 ATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSL 260
           A+ L +++ T+ + P  +T  ET ++ S+    T T+  +  TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281


>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 658

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +3

Query: 93  PTLKETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLS 257
           PT++ T T ++ T  T   + + TT+      + T +  T T P  + T+ LP++
Sbjct: 102 PTVETTTTPMVETT-TITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155


>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
           Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 278

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 152 PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPT 250
           PK   PN N  +P  NG   + PP    Y KPT
Sbjct: 46  PKASKPNSN--QPYPNGPVCIYPPNIYLYAKPT 76


>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
            Wis4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1401

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 184  RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 291
            R + ++C  R P  RP  +     PW + +  K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315


>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
            Spt6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1365

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 142  DVRAVVNRFVAVSLSVG-HSQQSEDENHEEF 53
            +VR V NRFVAV L  G       DE  ++F
Sbjct: 1056 NVRRVTNRFVAVKLDCGIDGNIKADEVSDDF 1086


>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
           Plh1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 623

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 155 KDYNPNGNGYEPIDNGAYYVDPPQGRP 235
           K Y  +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504


>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 618

 Score = 24.6 bits (51), Expect = 5.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 396 FFXKHYNMFIYLFR*HKFI*NFEI 325
           FF K Y+ F+++FR + FI +FE+
Sbjct: 188 FFLKQYHNFMFVFRDY-FIRDFEL 210


>SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 248

 Score = 24.6 bits (51), Expect = 5.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 78  LCWLWPTLKETATNLLTTARTS 143
           + W W TL  TA  +L+TA  S
Sbjct: 1   MIWFWSTLLVTAIAVLSTANES 22


>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
           Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 650

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 122 IDNRPYIVNPPKDYNPNGNGYEPIDNGAY 208
           +++ PY+ N   D+N NGN   P+   +Y
Sbjct: 370 VNSMPYLSNG--DHNNNGNTSSPVSRFSY 396


>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
           Ran1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 470

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
 Frame = +2

Query: 20  SPVITRDHIKMKFFMIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDN 199
           +P+    H    F+     A  A+ N   N Y PI   PY  N      PN     PI  
Sbjct: 388 TPLTAPIHATESFWPSAAAAAAAVHN-NANSYMPITPTPYPNNAKIFGYPNQPPLTPIPF 446

Query: 200 GAYYVDP-PQGR 232
             + + P P GR
Sbjct: 447 TGFVLHPAPVGR 458


>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 738

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 101 QGNGYEPIDNRPYIVNPPKDYNPNGNGY 184
           QG G +  D  PY ++P   Y P G  Y
Sbjct: 186 QGAGVKA-DINPYNLSPYSQYGPEGTAY 212


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +2

Query: 107  NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 259
            N Y PI      VNP   Y P+G        G+  V PP+ +P  +  P P
Sbjct: 982  NPYTPIAVASSTVNPAHTYKPHG--------GSQIVPPPK-QPANRVVPLP 1023


>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 547

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 74  LALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAY 208
           LAL ++   Q   Y  I+  P   N P  +N N N +  I   AY
Sbjct: 86  LALESLKGIQSKWYGYIEYLPKTFNTPLYFNENDNAF-LISTNAY 129


>SPCC126.05c |mrpl17||mitochondrial ribosomal protein subunit
           L17|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 268

 Score = 23.8 bits (49), Expect = 9.8
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 184 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 291
           +T+  R  L      P L   Y + WC+  E+KN L
Sbjct: 217 KTFLLRARLLNGLDVPNLQNVYDWVWCTYDELKNKL 252


>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
            Smc6|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1140

 Score = 23.8 bits (49), Expect = 9.8
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = -1

Query: 277  LPTASTR-ERGRLEVRSALG---RVHVICTVVDRFVAVSIRVVIFGRINDVRAVVNRFVA 110
            L TA  R E+ ++ V+   G       IC ++  + A+S  +      +     VNR V+
Sbjct: 1027 LATAHNRHEKSKVSVQGLSGGEKSFATICMLLSIWEAMSCPLRCLDEFDVFMDAVNRLVS 1086

Query: 109  VSLSVGHSQQSEDE 68
            + + V  ++ S D+
Sbjct: 1087 IKMMVDSAKDSSDK 1100


>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 275

 Score = 23.8 bits (49), Expect = 9.8
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = +2

Query: 95  NAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPT 250
           N + N  EP+        PPK+ N N +  +P +     V     +P   PT
Sbjct: 220 NEEVNNLEPVGQNESKQEPPKEENSNVSQEQP-EQAQPEVSAASEQPESNPT 270


>SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 565

 Score = 23.8 bits (49), Expect = 9.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 124 NRFVAVSLSVGHSQQSEDENHE 59
           NRF+ + L VG + ++  +NH+
Sbjct: 190 NRFLPIVLDVGTNNETHRKNHQ 211


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,636,442
Number of Sequences: 5004
Number of extensions: 35301
Number of successful extensions: 120
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 132093910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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