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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0151
         (625 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c...    32   0.077
SPAC869.04 |||formamidase-like protein|Schizosaccharomyces pombe...    29   0.41 
SPAC23H3.03c |||nitrogen permease regulator family|Schizosacchar...    28   1.3  
SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Sc...    27   2.2  
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce...    27   2.9  
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces...    26   5.1  
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr...    26   5.1  
SPCC1393.04 |fta4|sma6|Sim4 and Mal2 associated |Schizosaccharom...    25   6.7  
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce...    25   6.7  
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote...    25   6.7  
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c...    25   6.7  
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|...    25   6.7  
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...    25   8.9  
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch...    25   8.9  
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...    25   8.9  

>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1142

 Score = 31.9 bits (69), Expect = 0.077
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 433 SGCGRCRVWSMFVRYVRFSELVF*YMRPQKLYIF 534
           +GCG+  VW  +VR+V F E    +     LY++
Sbjct: 108 NGCGKSYVWPSYVRFVDFDERYTRFANKYSLYLY 141


>SPAC869.04 |||formamidase-like protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 410

 Score = 29.5 bits (63), Expect = 0.41
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 616 ARKIRGRPENAGPDPVRNVRRFSRVSYXIY 527
           AR I GRPEN G   ++N+ R S+V   ++
Sbjct: 214 ARTIPGRPENGGNCDIKNLSRGSKVFLPVH 243


>SPAC23H3.03c |||nitrogen permease regulator
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 409

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 459 VDVRALCSF*RVSILIYAASKTVYIXYDTRENRLT 563
           +DVR L SF  +  LIY   K  Y+   T  N LT
Sbjct: 330 LDVRRLISFGTIKGLIYRVHKYPYLERRTMRNNLT 364


>SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 334

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 160 PWNPIEGRYGSEREEHRICGGVRILSADLENSVRDVRGDVAP 285
           P+ P+EG Y + ++ HRI    R   A LE  +R V+    P
Sbjct: 3   PYEPVEGLYVNAKQYHRILKR-REARAKLEERLRGVQTTKKP 43


>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 993

 Score = 26.6 bits (56), Expect = 2.9
 Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
 Frame = -3

Query: 440 HPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALH-----LGDLLRIWVRTGAT 276
           HP  ++ R+ P+   N Y+  +  +  L    +   L + +     +G ++ ++V +G+T
Sbjct: 254 HPFYMEQRYIPIGTTNTYTSASHGVLMLSSNGMEVLLRSTYIKYRMIGGIIDLFVYSGST 313

Query: 275 -SPRTSLTEFSRSAESIRTP 219
            SP+ ++ ++    +SI TP
Sbjct: 314 VSPKYTIQQY---VQSIGTP 330


>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 967

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = -2

Query: 372 SNLPTSLTYIILSTRGSSPWRPAADMGTNRRDISTYIPHRIFKVRREYPDTAANAVLFAF 193
           S   TSL+      R S+P R   D G+++   +TYIPH   K   ++     +A     
Sbjct: 212 SEKDTSLSRRSSRGRSSAPKR-RKDSGSSKTT-ATYIPHNPSKKSSQHLPLLPDASFELE 269

Query: 192 RTISPFYRIP 163
           R++S  Y+ P
Sbjct: 270 RSVSRSYQSP 279


>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 121

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -3

Query: 212 MRCSSRSEPYLPSI-GFHGTRTLRQKRKLFPDLSAASSGHFGLPRRT 75
           MR +   E Y+  + G H   T  Q   LF D     + H  L RRT
Sbjct: 1   MRPAKSVEGYIIIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRT 47


>SPCC1393.04 |fta4|sma6|Sim4 and Mal2 associated
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 233

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 470 TNIDQTRHRPHPLPVQTRHAPV 405
           +N+D  +  PHP P Q    PV
Sbjct: 100 SNLDSVKSLPHPWPFQKESRPV 121


>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 351

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 358 FPYLHYSID*RLFTLETCCGYGYEPARHL 272
           +P+   S+D R+F LE+  GY  EP   L
Sbjct: 159 YPFDLDSLDKRIFKLESKIGYADEPLSEL 187


>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
           kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 678

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -1

Query: 259 SPNFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQA 98
           +P  + P  VSGH      LR+   IS    SM +ERS       R ++  + +
Sbjct: 611 TPLAKKPLPVSGHTNNAHPLRLSTEISASQLSMIIERSVELSKHKRLNKELIDS 664


>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1274

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -2

Query: 624  DLRLG-RSAEGRRTRVRIQSET*DDFRECHXKYIQFLRPHILKY*LAKTNITHE 466
            D +LG + A   + +V + S+  D  +E H KY+Q    + L+  LAK +I  E
Sbjct: 1055 DTKLGEKCANIVQLQVDLLSKLADQEKEKHLKYLQSSYKNSLEVQLAKLDIVKE 1108


>SPAC3A12.05c |taf2||TATA-binding protein associated factor
            Taf2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1174

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = -3

Query: 389  YSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSPRTSLTEFSRSAESIRTPPQM 210
            Y   +  +  L +P+L  RL A+HLG   +I ++    +P   +T  ++   +  TPP +
Sbjct: 1093 YKAKSSLLVTLKIPSLIPRLRAIHLGK-GKIVIK---KAPLKQITSKTKEKSTSPTPPSI 1148


>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 71  RVFDGVTQSGLKTPPRGPGRV 133
           RVF G  +SGLK   +GP  V
Sbjct: 399 RVFSGTVRSGLKVRIQGPNYV 419


>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 632

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +1

Query: 7   PVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPW 165
           PV +   G  TV+   P+S+  +    +P+ P  A+       + CL +   W
Sbjct: 132 PVSLEVRGRNTVTFYGPTSIFGTSFTSSPRPPPSASIEDTYPIIHCLQLFFKW 184


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 71  RVFDGVTQSGLKTPPRGPGRV 133
           RVF G  +SGLK   +GP  V
Sbjct: 399 RVFSGTVRSGLKVRIQGPNYV 419


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,712,331
Number of Sequences: 5004
Number of extensions: 57218
Number of successful extensions: 177
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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