SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30077
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0546 - 9381989-9383733,9385838-9386054                          149   2e-36
11_08_0075 + 28173220-28173433,28175348-28177083                      144   6e-35
05_05_0109 - 22454539-22456268,22457069-22457279                      143   1e-34
03_06_0484 + 34233042-34233258,34235317-34237049                      142   2e-34
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229    142   2e-34
03_02_0540 + 9340379-9340592,9341250-9342988                          141   4e-34
03_02_0542 - 9348126-9349585,9352433-9352655                          126   1e-29
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84...   126   2e-29
11_01_0564 - 4447078-4448519,4449465-4449711                          114   6e-26
05_04_0392 - 20889699-20891726                                        113   1e-25
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442...   113   1e-25
08_01_0654 - 5639419-5641449                                          112   2e-25
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906...   109   2e-24
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090...   109   3e-24
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74...   107   6e-24
05_04_0052 - 17515344-17517353                                        105   3e-23
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836          103   2e-22
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443...   103   2e-22
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819     54   8e-08
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165     54   1e-07
03_02_0180 - 6211823-6213559                                           47   2e-05
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728...    42   6e-04
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425...    38   0.006
06_03_0069 + 16179765-16179936,16179982-16180256                       38   0.010
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058...    35   0.054
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482...    33   0.22 
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093...    31   1.2  
02_03_0360 + 18104948-18106159                                         31   1.2  
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282...    30   1.5  
02_05_0309 + 27762613-27763070,27763940-27764060,27764168-277642...    30   1.5  
04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043     30   2.0  
03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916...    29   2.7  
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540...    29   3.5  
01_01_0753 - 5814087-5814344,5814461-5814646,5814847-5815004,581...    29   3.5  
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798...    28   6.2  
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430...    28   6.2  
01_01_0284 - 2357085-2357244,2357354-2357730,2359114-2359371           28   6.2  
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413...    28   8.2  
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591...    28   8.2  
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431...    28   8.2  
01_06_0931 - 33139383-33139580,33139748-33139870,33142520-331428...    28   8.2  

>03_02_0546 - 9381989-9383733,9385838-9386054
          Length = 653

 Score =  149 bits (361), Expect = 2e-36
 Identities = 70/88 (79%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DNNLLGKFELTGIPPAPRGVPQI VTFDIDANGILNVSA +K+T K+NKITITNDKGRLS
Sbjct: 459 DNNLLGKFELTGIPPAPRGVPQINVTFDIDANGILNVSAEDKTTGKKNKITITNDKGRLS 518

Query: 181 KEEIERMVNEAEKYRNEDDKQKETIRPR 264
           KEEIERMV EAEKY+ ED++ +  +  R
Sbjct: 519 KEEIERMVQEAEKYKAEDEQVRHKVEAR 546



 Score =  109 bits (263), Expect = 2e-24
 Identities = 47/91 (51%), Positives = 65/91 (71%)
 Frame = +3

Query: 237 QAKGDHQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 416
           Q +   +A+NALE+Y ++M++T+ DEK+  K+   DK+ I D   D IKWLD NQLA+ +
Sbjct: 538 QVRHKVEARNALENYAYNMRNTVRDEKIASKLPADDKKKIEDAIEDAIKWLDGNQLAEAD 597

Query: 417 EYEHKQKELEGICNPIITKMYQGAGGVPGGI 509
           E+E K KELE +CNPII+KMYQG  G P G+
Sbjct: 598 EFEDKMKELESLCNPIISKMYQGGAGGPAGM 628


>11_08_0075 + 28173220-28173433,28175348-28177083
          Length = 649

 Score =  144 bits (349), Expect = 6e-35
 Identities = 66/88 (75%), Positives = 79/88 (89%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLS
Sbjct: 458 DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLS 517

Query: 181 KEEIERMVNEAEKYRNEDDKQKETIRPR 264
           KEEIE+MV EAEKY++ED++ K+ +  +
Sbjct: 518 KEEIEKMVQEAEKYKSEDEEHKKKVESK 545



 Score =  106 bits (254), Expect = 2e-23
 Identities = 46/86 (53%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
 Frame = +3

Query: 255 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 434
           ++KNALE+Y ++M++T++DEK+  K+  +DK+ I D  +  I+WLD NQLA+ +E++ K 
Sbjct: 543 ESKNALENYAYNMRNTIKDEKIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDDKM 602

Query: 435 KELEGICNPIITKMYQGAGG-VPGGI 509
           KELEGICNPII KMYQGAG  + GG+
Sbjct: 603 KELEGICNPIIAKMYQGAGADMAGGM 628


>05_05_0109 - 22454539-22456268,22457069-22457279
          Length = 646

 Score =  143 bits (346), Expect = 1e-34
 Identities = 66/85 (77%), Positives = 77/85 (90%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLS
Sbjct: 457 DNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLS 516

Query: 181 KEEIERMVNEAEKYRNEDDKQKETI 255
           KEEIE+MV EAEKY+ ED++ K+ +
Sbjct: 517 KEEIEKMVQEAEKYKAEDEEHKKKV 541



 Score =  105 bits (253), Expect = 3e-23
 Identities = 47/85 (55%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = +3

Query: 258 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 437
           AKNALE+Y ++M++T++DEK+  K++  DK+ I D  +  I WLD+NQLA+ +E+E K K
Sbjct: 543 AKNALENYAYNMRNTIKDEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKMK 602

Query: 438 ELEGICNPIITKMYQGAGG-VPGGI 509
           ELEGICNPII KMYQG G  + GG+
Sbjct: 603 ELEGICNPIIAKMYQGPGADMAGGM 627


>03_06_0484 + 34233042-34233258,34235317-34237049
          Length = 649

 Score =  142 bits (345), Expect = 2e-34
 Identities = 65/85 (76%), Positives = 78/85 (91%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLS
Sbjct: 459 DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLS 518

Query: 181 KEEIERMVNEAEKYRNEDDKQKETI 255
           KEEIE+MV +AEKY++ED++ K+ +
Sbjct: 519 KEEIEKMVQDAEKYKSEDEEHKKKV 543



 Score =  108 bits (260), Expect = 4e-24
 Identities = 47/83 (56%), Positives = 63/83 (75%)
 Frame = +3

Query: 258 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 437
           AKN+LE+Y ++M++T++DEK+  K+   DK+ I D     I+WLD+NQLA+ EE+E K K
Sbjct: 545 AKNSLENYAYNMRNTIQDEKIASKLPADDKKKIEDAVEQAIQWLDNNQLAEVEEFEDKMK 604

Query: 438 ELEGICNPIITKMYQGAGGVPGG 506
           ELEG+CNPII KMYQGAG   GG
Sbjct: 605 ELEGLCNPIIAKMYQGAGADMGG 627


>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
          Length = 841

 Score =  142 bits (345), Expect = 2e-34
 Identities = 66/85 (77%), Positives = 77/85 (90%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLS
Sbjct: 650 DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLS 709

Query: 181 KEEIERMVNEAEKYRNEDDKQKETI 255
           KEEIE+MV EAEKY+ ED++ K+ +
Sbjct: 710 KEEIEKMVQEAEKYKAEDEEHKKKV 734



 Score =  108 bits (260), Expect = 4e-24
 Identities = 48/83 (57%), Positives = 63/83 (75%)
 Frame = +3

Query: 258 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 437
           AKNALE+Y ++M++T++D+K+  K+S  DK+ I D  +  I WLDSNQLA+ +E+E K K
Sbjct: 736 AKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKMK 795

Query: 438 ELEGICNPIITKMYQGAGGVPGG 506
           ELE ICNPII KMYQGAG   GG
Sbjct: 796 ELESICNPIIAKMYQGAGADMGG 818


>03_02_0540 + 9340379-9340592,9341250-9342988
          Length = 650

 Score =  141 bits (342), Expect = 4e-34
 Identities = 65/85 (76%), Positives = 77/85 (90%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLS
Sbjct: 458 DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLS 517

Query: 181 KEEIERMVNEAEKYRNEDDKQKETI 255
           KE+IE+MV EAEKY+ ED++ K+ +
Sbjct: 518 KEDIEKMVQEAEKYKAEDEEHKKKV 542



 Score =  108 bits (260), Expect = 4e-24
 Identities = 47/85 (55%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = +3

Query: 258 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 437
           AKN+LE+Y ++M++T++D+K+  K+ ++DK+ I D  +  I WLDSNQLA+ EE+E K K
Sbjct: 544 AKNSLENYAYNMRNTIKDDKIASKLPEADKKKIEDAIDGAISWLDSNQLAEAEEFEDKMK 603

Query: 438 ELEGICNPIITKMYQGAGG-VPGGI 509
           ELEG+CNPII KMYQGAG  + GG+
Sbjct: 604 ELEGVCNPIIAKMYQGAGADMAGGM 628


>03_02_0542 - 9348126-9349585,9352433-9352655
          Length = 560

 Score =  126 bits (305), Expect = 1e-29
 Identities = 59/81 (72%), Positives = 69/81 (85%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DNN LGKF LTGIPPAPRGVPQI VTF ID NGI+NVSA +K+T + N ITI +DKGRLS
Sbjct: 470 DNNPLGKFVLTGIPPAPRGVPQINVTFSIDYNGIMNVSAEDKTTGRSNSITIKSDKGRLS 529

Query: 181 KEEIERMVNEAEKYRNEDDKQ 243
           KEEIERMV +AEKY+ ED+++
Sbjct: 530 KEEIERMVKKAEKYKAEDEEE 550


>02_01_0112 -
           839048-839552,839638-839720,839828-839982,840078-840557,
           840855-841097,841189-841403,841489-841756,842477-842525
          Length = 665

 Score =  126 bits (303), Expect = 2e-29
 Identities = 60/88 (68%), Positives = 70/88 (79%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           D  LLGKF+L+GIP APRG PQIEVTF++DANGILNV A +K T K  KITITN+KGRLS
Sbjct: 481 DCRLLGKFDLSGIPAAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLS 540

Query: 181 KEEIERMVNEAEKYRNEDDKQKETIRPR 264
           +EEI+RMV EAE++  ED K KE I  R
Sbjct: 541 QEEIDRMVREAEEFAEEDKKVKERIDAR 568



 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 40/84 (47%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = +3

Query: 258 AKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 434
           A+N LE+Y ++MK+T+ D +KL +K+   +K+ + +   + ++WLD NQ A+KEEYE K 
Sbjct: 567 ARNQLETYVYNMKNTVGDKDKLADKLESEEKEKVEEALKEALEWLDENQTAEKEEYEEKL 626

Query: 435 KELEGICNPIITKMYQGAGGVPGG 506
           KE+E +CNPII+ +YQ  GG PGG
Sbjct: 627 KEVEAVCNPIISAVYQRTGGAPGG 650


>11_01_0564 - 4447078-4448519,4449465-4449711
          Length = 562

 Score =  114 bits (275), Expect = 6e-26
 Identities = 54/85 (63%), Positives = 67/85 (78%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DNNLLG+F L GIPPAP+ VP I+VTFDIDANG+LNVSA  K T ++N ITITN  GRL+
Sbjct: 478 DNNLLGEFTLYGIPPAPKRVPSIDVTFDIDANGVLNVSAEHKVTGQKNSITITNRSGRLN 537

Query: 181 KEEIERMVNEAEKYRNEDDKQKETI 255
           KEEI+RM  EAE+++ +  KQ E +
Sbjct: 538 KEEIDRMALEAERHKMKRIKQNEVV 562


>05_04_0392 - 20889699-20891726
          Length = 675

 Score =  113 bits (273), Expect = 1e-25
 Identities = 51/88 (57%), Positives = 69/88 (78%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DN LLGKF+LTGI PAPRG PQI VTF++DANGIL+V A +K+T +  KITI+ D  ++S
Sbjct: 493 DNRLLGKFDLTGIAPAPRGAPQIAVTFEVDANGILSVLAADKATGRSEKITISGDDRKIS 552

Query: 181 KEEIERMVNEAEKYRNEDDKQKETIRPR 264
           +EEI+RMV EAE++ +ED + +E +  R
Sbjct: 553 QEEIDRMVREAEEFADEDRRHREQVDAR 580



 Score = 74.5 bits (175), Expect = 7e-14
 Identities = 32/82 (39%), Positives = 55/82 (67%)
 Frame = +3

Query: 258 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 437
           A+N+LE+Y +++KST+   K+ + +   +K+ + +   +  +WLD N  A KEEYE K +
Sbjct: 579 ARNSLEAYVYNVKSTLGG-KMADAMEGEEKEKVEEAVREAHEWLDGNPDAGKEEYEEKLR 637

Query: 438 ELEGICNPIITKMYQGAGGVPG 503
           ELE +CNP+++ +YQ +GG  G
Sbjct: 638 ELEDVCNPVMSAVYQRSGGGGG 659


>03_05_0877 +
           28443481-28443538,28443641-28443911,28444028-28444242,
           28444329-28445057,28445143-28445297,28445384-28445965
          Length = 669

 Score =  113 bits (273), Expect = 1e-25
 Identities = 51/84 (60%), Positives = 68/84 (80%)
 Frame = +1

Query: 13  LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEI 192
           LG+F+L+GI PAPRGVPQIEVTF++D NGIL+V+A +K+  +   ITITNDKGRLS+EEI
Sbjct: 491 LGRFDLSGIAPAPRGVPQIEVTFEVDENGILHVTASDKAAGRSKSITITNDKGRLSQEEI 550

Query: 193 ERMVNEAEKYRNEDDKQKETIRPR 264
           +RMV EAE++  ED + +E +  R
Sbjct: 551 DRMVREAEEFAEEDRRVRERVDAR 574



 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
 Frame = +3

Query: 258 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN----QLADKEEYE 425
           A+N LE+Y + M+S + D  +  KI D D++ +     + ++WL+ N    + A+KE+YE
Sbjct: 573 ARNRLENYVYRMRSAVRDGGMAGKIGDDDRERMESALTEALEWLEDNDGGARTAEKEDYE 632

Query: 426 HKQKELEGICNPIITKMYQGAGGVPGG 506
            K KE+E +C PII ++Y+ +G    G
Sbjct: 633 EKLKEVEQVCGPIIKQVYKKSGDASAG 659


>08_01_0654 - 5639419-5641449
          Length = 676

 Score =  112 bits (270), Expect = 2e-25
 Identities = 50/88 (56%), Positives = 68/88 (77%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DN LLG+F+L GI PAPRG PQIEVTF++DANGIL+V A +K+T +  KITI+ D  ++S
Sbjct: 493 DNRLLGRFDLAGIAPAPRGAPQIEVTFEVDANGILSVLAADKATGRSEKITISGDDRKIS 552

Query: 181 KEEIERMVNEAEKYRNEDDKQKETIRPR 264
           +EEI+RMV EAE++  ED + +E +  R
Sbjct: 553 QEEIDRMVREAEEFAEEDRRHREQVDAR 580



 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 32/83 (38%), Positives = 55/83 (66%)
 Frame = +3

Query: 258 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 437
           A+N+LE+Y +++K+T+   K+ + +   +K  + +   +  +WLD N  A KEEYE K +
Sbjct: 579 ARNSLEAYVYNIKNTLGG-KMADAMEGEEKDKVEEAVREAYEWLDGNPDAGKEEYEEKLR 637

Query: 438 ELEGICNPIITKMYQGAGGVPGG 506
           ELE +CNP+++ +YQ +GG  GG
Sbjct: 638 ELEDVCNPVMSAVYQRSGGGGGG 660


>05_03_0397 +
           13488642-13488941,13489711-13489963,13490594-13490673,
           13491251-13491393,13491512-13491610,13491785-13491974,
           13492504-13492902,13492993-13493400
          Length = 623

 Score =  109 bits (262), Expect = 2e-24
 Identities = 52/85 (61%), Positives = 64/85 (75%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DN  LG F L GIPPAPRGVPQIEV FDIDANGIL+VSA++K T K+  ITIT     L 
Sbjct: 427 DNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITG-ASTLP 485

Query: 181 KEEIERMVNEAEKYRNEDDKQKETI 255
           K+E+E+MV EAEK+  ED ++++ I
Sbjct: 486 KDEVEKMVEEAEKFAKEDKEKRDAI 510


>02_05_0916 -
           32706039-32706332,32707483-32708103,32708450-32709070,
           32709183-32709752,32709840-32709918,32710002-32710075,
           32711336-32711398
          Length = 773

 Score =  109 bits (261), Expect = 3e-24
 Identities = 55/94 (58%), Positives = 70/94 (74%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DN LLG+F+L GIPPAPRG+PQIEVTFDIDANGI+ VSA +KST KE +ITI    G LS
Sbjct: 495 DNKLLGEFDLVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITI-RSSGGLS 553

Query: 181 KEEIERMVNEAEKYRNEDDKQKETIRPRMHWNLT 282
           + EI++MV EAE +  +D ++K  I  R + + T
Sbjct: 554 EAEIQKMVQEAELHSQKDQERKALIDIRNNADTT 587


>03_01_0093 -
           745434-746057,746492-747112,747222-747791,747870-747948,
           748258-748331,748385-748387
          Length = 656

 Score =  107 bits (258), Expect = 6e-24
 Identities = 52/85 (61%), Positives = 67/85 (78%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DN LLG+F+L GIPPAPRG+PQIEVTFDIDANGI+ VSA +K+T KE +ITI    G LS
Sbjct: 475 DNKLLGEFDLVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITI-RSSGGLS 533

Query: 181 KEEIERMVNEAEKYRNEDDKQKETI 255
           + EI++MV+EAE +  +D ++K  I
Sbjct: 534 EAEIQKMVHEAELHSQKDQERKALI 558


>05_04_0052 - 17515344-17517353
          Length = 669

 Score =  105 bits (252), Expect = 3e-23
 Identities = 45/83 (54%), Positives = 66/83 (79%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DN LLG+F+L GI PAPRG PQIEV F++DA+GIL+VSA +++T +  +ITI+ D  + S
Sbjct: 489 DNRLLGRFDLAGIAPAPRGAPQIEVAFEVDADGILSVSAADRATGRSERITISGDDRKTS 548

Query: 181 KEEIERMVNEAEKYRNEDDKQKE 249
           +EEI+RM+ EAE++ +ED + +E
Sbjct: 549 REEIDRMLGEAEEFADEDRRHRE 571



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 28/79 (35%), Positives = 50/79 (63%)
 Frame = +3

Query: 258 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 437
           A+N+LE+Y + +K+ +   ++   +   +K+ +     +  +WLD NQ   KEEYE K +
Sbjct: 575 ARNSLEAYVYGVKNAVVGGEMAGAMDGGEKEKVEAAVMEAYEWLDGNQDVGKEEYEEKLR 634

Query: 438 ELEGICNPIITKMYQGAGG 494
           ELE +CNP+++ +YQ +GG
Sbjct: 635 ELEDVCNPVMSAVYQRSGG 653


>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
          Length = 526

 Score =  103 bits (246), Expect = 2e-22
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
           DNNLLGKF L+G+ PAPRGVPQI+VTFD D NG+L+V A +  T  +N  TITN  GRL 
Sbjct: 431 DNNLLGKFVLSGVLPAPRGVPQIDVTFDFDTNGVLHVFAEDMGTGSKNNNTITNHSGRLK 490

Query: 181 KEEIERMVNEAEKYRNEDDKQKETIR 258
           KE++ERM  EA  Y  +  + + +++
Sbjct: 491 KEDVERMSREARSYNRKRKRTRSSLQ 516


>11_01_0563 +
           4423609-4423846,4424671-4426132,4428949-4429364,
           4430555-4432052,4432199-4432217,4432469-4432675,
           4432814-4433065
          Length = 1363

 Score =  103 bits (246), Expect = 2e-22
 Identities = 47/73 (64%), Positives = 56/73 (76%)
 Frame = +1

Query: 4   NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSK 183
           NNLLGKF L+GI PAPRGVPQI+VTF+ DANG+L+VSA +  T  +N I ITN  GRL K
Sbjct: 487 NNLLGKFVLSGILPAPRGVPQIDVTFEFDANGVLHVSAKDMGTGSKNNIAITNHSGRLKK 546

Query: 184 EEIERMVNEAEKY 222
           E++ERM  EA  Y
Sbjct: 547 EDVERMAREARSY 559



 Score = 98.3 bits (234), Expect = 5e-21
 Identities = 48/81 (59%), Positives = 60/81 (74%)
 Frame = +1

Query: 1    DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
            DN+L   F L GIPPAP GVP  +VTFDID NG+LNV+A +K T ++N I I+N  GRL+
Sbjct: 1277 DNDL---FRLFGIPPAPMGVPHFDVTFDIDGNGVLNVTAEDKDTGRKNNIIISNRSGRLN 1333

Query: 181  KEEIERMVNEAEKYRNEDDKQ 243
            KEEIERM  EAE+Y+ +  KQ
Sbjct: 1334 KEEIERMALEAERYKMKRIKQ 1354



 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 42/86 (48%), Positives = 61/86 (70%)
 Frame = +1

Query: 1    DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
            +N LLG+F L+GI PAP GV +I+ T +IDANG+L+VSA +  T ++N ITITN  GRL 
Sbjct: 1120 NNYLLGEFVLSGITPAPAGVARIDETLEIDANGVLHVSAEDMGTGRKNSITITNHSGRLK 1179

Query: 181  KEEIERMVNEAEKYRNEDDKQKETIR 258
            KE++ERM  EA  Y  +  + + +++
Sbjct: 1180 KEDVERMSREARSYNRKRKRTRSSLQ 1205


>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
          Length = 539

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 28/66 (42%), Positives = 45/66 (68%)
 Frame = +1

Query: 67  IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 246
           + V F IDA+G+L VSA +K    +N++ +  ++ +LSKEEIERM  EA++Y   D+ +K
Sbjct: 469 VSVCFSIDADGVLTVSARDKVNGHKNQMRVM-EQSQLSKEEIERMTMEAKEYMAADE-EK 526

Query: 247 ETIRPR 264
           E I+ +
Sbjct: 527 ERIKAK 532


>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
          Length = 648

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 12/97 (12%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAP------RGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITIT 159
           DN L G+  LTGIPPA       R  P I+VT  +D  G ++V A +K  + K  +++I 
Sbjct: 481 DNTLFGRLVLTGIPPASVWNWGWRWRP-IQVTVKVDELGDIHVEATDKGGSGKSERLSIV 539

Query: 160 N----DKGRLSKEEIERMVNE-AEKYRNEDDKQKETI 255
           +    + GRLSKEEI+RM+ E AE    E+   KE +
Sbjct: 540 SGEGHEHGRLSKEEIDRMIREVAEDLVEEERIVKERV 576



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = +3

Query: 363 KCNDTIKWLDSNQLADKEEYEHKQKELEGICNPI 464
           K     +WLD N  A+KE+YE K KELE  C P+
Sbjct: 602 KARAASEWLDGNPAAEKEDYEEKLKELEDACGPV 635


>03_02_0180 - 6211823-6213559
          Length = 578

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +1

Query: 1   DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 117
           DN+LLG F++TGIP A +G  +I V  DIDA  +L V A
Sbjct: 489 DNHLLGYFKITGIPAAAKGTVEINVCMDIDAGNVLRVFA 527


>02_05_0491 +
           29470575-29471351,29471574-29471806,29472697-29472856,
           29473149-29473394,29473492-29473628,29473874-29474207,
           29474283-29474444,29474717-29474791,29474866-29474966,
           29475042-29475111,29475210-29475266,29475357-29475418,
           29475505-29475577,29475663-29475884
          Length = 902

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 21/88 (23%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = +3

Query: 219 VQKRG*QAKGDHQAKNALESYCFSMKSTMEDE-KLKEKISDSDKQTILDKCNDTIKWL-D 392
           + K+  + +   + KN LESY +SMK  +E+  ++    ++ ++++  +K N+   WL  
Sbjct: 656 LDKKDAERRRTAELKNNLESYIYSMKEKLEENTEILTVSTEQERESFAEKLNEVQDWLYM 715

Query: 393 SNQLADKEEYEHKQKELEGICNPIITKM 476
             + A   E++ +  +L+ I +PI+ ++
Sbjct: 716 DGEDAQANEFKERLDQLKAIGDPILFRL 743


>01_01_0573 +
           4253484-4254653,4255526-4255735,4255842-4255937,
           4256034-4256255,4256829-4257023,4257097-4257243,
           4257323-4257472,4257762-4257892,4257978-4258194
          Length = 845

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +3

Query: 261 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQK 437
           KNA+ESY + M++ + D K  + ++  DK+  + K  +   WL +  +   K  Y  K +
Sbjct: 618 KNAVESYVYDMRNKLYD-KYNDFVTAEDKEAFIAKLQEVEDWLYEDGEDETKGVYVAKLE 676

Query: 438 ELEGICNPI 464
           EL+ +  PI
Sbjct: 677 ELKKVGGPI 685


>06_03_0069 + 16179765-16179936,16179982-16180256
          Length = 148

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +3

Query: 21  IRADRDPTGAAWRASN*GHLRHRCQRYPKRFRYREVHQQGEQDHHYQRQ 167
           +R  R   G    A++ G LRH  +R+P+R    + H+Q  +DH+ QRQ
Sbjct: 75  VRLHRHRVGVERAAADRGDLRHGRERHPQRVGRGQGHRQVGEDHYLQRQ 123


>06_03_1137 +
           27903012-27904196,27904330-27904542,27905775-27905867,
           27905940-27906008,27906412-27906612,27906688-27906834,
           27907524-27907652,27909001-27909131,27909240-27909333
          Length = 753

 Score = 35.1 bits (77), Expect = 0.054
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +3

Query: 255 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHK 431
           + KNALESY +  ++ +  E+ +   +DS+++ I      T  WL +      +  Y  K
Sbjct: 572 ERKNALESYVYDTRNKL-SERYRSFATDSEREEISLSLQQTEDWLYEEGDDETEAVYNSK 630

Query: 432 QKELEGICNPI 464
            +EL+ + +PI
Sbjct: 631 LEELKRLVDPI 641


>05_01_0550 +
           4820086-4821255,4822112-4822321,4822429-4822524,
           4822610-4822828,4823201-4823395,4823466-4823612,
           4823712-4823861,4825015-4825145,4825234-4825477
          Length = 853

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +3

Query: 255 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHK 431
           + KNA+E+Y + M++ + D K  + +    K+  + K  +   WL +  +   K  Y  K
Sbjct: 615 EKKNAVEAYVYDMRNKLYD-KYNDFVMSEYKEGFIAKLQEVEDWLYEDGEDETKGVYIAK 673

Query: 432 QKELEGICNPI 464
            +EL+ + +PI
Sbjct: 674 LEELKKVGDPI 684


>05_07_0329 -
           29308867-29308932,29309040-29309159,29309245-29309364,
           29309566-29310123,29310199-29310258,29310839-29310904,
           29310993-29311103,29311167-29311257,29311349-29311449,
           29311534-29311641,29311737-29314205
          Length = 1289

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 115 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 246
           A E+   +E +     ++ RL KEE ER   EA++ + E +K+K
Sbjct: 438 AEERKKREEEERLRKEEEERLKKEEEERKAEEAKRRKKEREKEK 481


>02_03_0360 + 18104948-18106159
          Length = 403

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 169 GRLSKEEIERMVNEAEKYRNEDDKQKETIR 258
           GR  +EE+E M  EAE+ + E +K++E +R
Sbjct: 167 GRGGEEEVEEMRREAERAQEELEKEREMLR 196


>11_06_0656 +
           25926192-25926289,25927530-25927659,25928248-25928294,
           25929274-25929388,25929504-25929753,25930079-25930239,
           25930372-25930567,25930672-25930836,25930918-25931070,
           25931160-25931248,25931385-25931423,25931460-25931681,
           25933503-25934165
          Length = 775

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -2

Query: 574 WGQRLQPRGRHLRLRVSAREARIPPGTPPAP 482
           W  R  P GRH R   S R    PP TP +P
Sbjct: 558 WPPRRLPHGRHGRRNPSRRRRPTPPLTPASP 588


>02_05_0309 +
           27762613-27763070,27763940-27764060,27764168-27764287,
           27764633-27764863,27764964-27765503
          Length = 489

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
 Frame = +3

Query: 336 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEG---ICNPIITKMYQGAGGVPGG 506
           DSD++   D  ++ ++  +  +  ++EEYE +++E+EG   + +P++    +G GG  GG
Sbjct: 18  DSDEEEEEDDEDEEVE--EEEEEEEEEEYEGEEEEMEGEVPVSSPLMLPAARGGGG--GG 73

Query: 507 I 509
           +
Sbjct: 74  V 74


>04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043
          Length = 436

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 495 LLRHPGTSSLLSDCKCLPILSACAHTPPCRPVGW 394
           +L HP T++ LS C    +L + AH  P   +GW
Sbjct: 315 ILAHPSTAAFLSHCGWSSVLESMAHGVPV--IGW 346


>03_01_0009 -
           89127-89924,90090-90518,90582-90716,91102-91382,
           91634-91809,91899-92011,92157-92278,92375-92594
          Length = 757

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/73 (20%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +3

Query: 237 QAKGDHQAKNA--LESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLAD 410
           Q + D  ++ A  ++  C+   + +  ++++E+    + Q+ LDK ND ++   +++ A 
Sbjct: 329 QDESDDASRQASKVDLICYQRMAELAAKRMEEEAQLREIQSRLDKANDNVEKQKAHRYAA 388

Query: 411 KEEYEHKQKELEG 449
           ++   H Q  + G
Sbjct: 389 EQALNHVQDLVRG 401


>03_05_0704 -
           26953474-26953643,26953770-26953801,26953915-26954009,
           26954107-26954180,26954283-26954412,26954522-26954585,
           26954660-26954722,26954795-26954937,26955386-26955523,
           26955610-26955731,26955805-26955976,26956559-26956630,
           26956753-26956887,26956987-26957103,26957184-26957316,
           26957455-26957561,26958060-26958077,26958235-26958379,
           26958472-26958671,26960744-26961421
          Length = 935

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 19  KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTN 135
           ++++TGIP AP      E+ FD+D N I  V   +K  N
Sbjct: 368 RYKITGIPSAPMN----ELMFDLDGNRISVVQYFKKQYN 402


>01_01_0753 -
           5814087-5814344,5814461-5814646,5814847-5815004,
           5815082-5815214,5815299-5815489,5815826-5816281,
           5816543-5816661,5816729-5816872,5816994-5817065,
           5817368-5817500,5817598-5817733
          Length = 661

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +3

Query: 279 YCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDS---NQLADKEEYEHKQKELEG 449
           YCF    T+  E +  K+ ++D Q  +  CN   ++L     ++L D    EH   ELE 
Sbjct: 550 YCFG---TLLIEIISGKLPEADDQKSM--CNWAAEYLKGKSYSKLVDASLKEHNANELEA 604

Query: 450 ICNPI 464
           +C  I
Sbjct: 605 VCEVI 609


>09_04_0087 +
           14476539-14476675,14478876-14479635,14479720-14479871,
           14479958-14480024,14480632-14480831,14480915-14481068,
           14481585-14481669,14481766-14481857,14482575-14482766,
           14482867-14482992,14483072-14483125,14483494-14483550,
           14484509-14484606,14484703-14485038,14485116-14485203,
           14486891-14487016,14487082-14487138,14488054-14488133,
           14488228-14488270,14488948-14489034,14489331-14489420,
           14489996-14490054,14490141-14490231,14490330-14490495,
           14490662-14490755,14491787-14492909
          Length = 1537

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 20/60 (33%), Positives = 32/60 (53%)
 Frame = +1

Query: 70  EVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 249
           +++ D   NG  N SA +K  +KE +    N+K +  KEE     NE EK   E++ +K+
Sbjct: 177 QISDDQAVNGC-NGSADKK--DKEEETEKDNEKEKEDKEEETEKDNEKEKEDKEEETKKD 233


>01_05_0487 +
           22641133-22642182,22642276-22642863,22642961-22643068,
           22643582-22643692,22643784-22643849,22644858-22644917,
           22644990-22645119,22645159-22645547,22645783-22645902,
           22645957-22646022,22646190-22646255
          Length = 917

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 163 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIRPR 264
           ++ RL +EE ERMV E +  + E DK K T++ R
Sbjct: 202 EEERLQREEDERMVEEMKMQQKERDKGK-TMKKR 234


>01_01_0284 - 2357085-2357244,2357354-2357730,2359114-2359371
          Length = 264

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/58 (29%), Positives = 31/58 (53%)
 Frame = +1

Query: 79  FDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 252
           F I      N   + ++   EN   + +    ++ +E +R  NEA++ RNEDD+++ET
Sbjct: 96  FKISDEKGFNSITLTRTYQGENIEVLVSMPSLVTGDEPDRE-NEADEDRNEDDQEEET 152


>08_01_0469 -
           4127950-4127988,4127989-4128264,4128845-4130861,
           4131134-4131987
          Length = 1061

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 622 RFTCGVECWFNRPPRWWGQRLQPRGRHLRLRVSARE 515
           R+ C V   F+R P W    L P   +L LRV+  E
Sbjct: 763 RYLCLVSLRFHRMPEWINWSLLPNLSYLELRVNFLE 798


>07_01_0769 +
           5908942-5908946,5909085-5909666,5910370-5910429,
           5910635-5910674,5910767-5910860,5911582-5911952
          Length = 383

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = +3

Query: 33  RDPTGAAWRASN*GHLRHRCQRYPKRFRYREVHQQGEQDHHYQRQRSSLQGRDRAYG 203
           RD  G+  R     H R R  R  KR ++R V    E D    RQR   QG+++  G
Sbjct: 106 RDQEGSVERDQERSHQRDR-HRSVKRDQHRSV----ECDQQRSRQRDQQQGQEKVVG 157


>03_01_0582 -
           4318837-4318967,4319219-4319399,4319504-4319701,
           4319791-4320053,4320453-4320597
          Length = 305

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 444 PILSACAHTPPCRPVGWNPAT*WCRCTCRGW 352
           P+ +  A  PP  P GW+PA    +   +GW
Sbjct: 277 PVATEAAVVPPVAPTGWDPA---AQPAAQGW 304


>01_06_0931 -
           33139383-33139580,33139748-33139870,33142520-33142891,
           33143380-33143450,33143769-33143810,33143895-33143967,
           33144518-33144679,33144778-33144878,33144992-33145114,
           33145296-33145689
          Length = 552

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 380 DGVVALVEDGLLVRVRDLFLELLILHGRLHAEAVRFQCI 264
           DG+V +  DG+LV V D F ++L+   R   + + + C+
Sbjct: 193 DGIVCVSGDGVLVEV-DFFTDILVYPFRGMRKRLAYDCV 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,176,586
Number of Sequences: 37544
Number of extensions: 345541
Number of successful extensions: 1580
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -