Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30072
(723 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 141 4e-34
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 141 4e-34
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 141 6e-34
11_06_0087 - 19919224-19922304 33 0.30
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.93
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 30 2.1
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 3.7
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 4.9
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 4.9
06_03_0124 - 16942492-16945032,16945478-16945572,16945966-169460... 28 6.5
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 6.5
10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504 28 8.6
07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660 28 8.6
07_01_1127 + 10456895-10457388,10457488-10458112 28 8.6
05_03_0545 - 15244647-15245147,15245342-15245635 28 8.6
05_03_0177 - 9245131-9245793 28 8.6
03_02_0277 + 7056341-7056391,7056681-7056764,7057107-7057223,705... 28 8.6
02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022 28 8.6
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 141 bits (342), Expect = 4e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 180
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREV 61
Query: 181 LKIVKQRLIKVDGKVRTDPTYPAG 252
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPAG 85
Score = 124 bits (300), Expect = 5e-29
Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Frame = +3
Query: 255 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 434
MDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRT
Sbjct: 87 MDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT 146
Query: 435 IRYPDPLIKVNDSIQLDIATTKIMDSSSLSLGTCV*SREAVTWGVWAPSCPA-RDIPAPS 611
IRYPDP+IK ND+I++D+ T KI+D +G V VT G ++
Sbjct: 147 IRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVV----MVTGGRNTGRVGVIKNREKHK 202
Query: 612 TLCTSRTPRDTLRHEVEQRVHN----RQGHEAYISLPRGKG 722
+ D L H+ R+ N +G++ ++SLP+GKG
Sbjct: 203 GSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKG 243
Score = 69.7 bits (163), Expect = 2e-12
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +2
Query: 509 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGH 643
FIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH
Sbjct: 172 FIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGH 216
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +1
Query: 637 GTHFATRLNNVFIIGKGTK 693
G FATRL NVF IGKG K
Sbjct: 215 GHQFATRLGNVFTIGKGNK 233
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 141 bits (342), Expect = 4e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 180
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREV 61
Query: 181 LKIVKQRLIKVDGKVRTDPTYPAG 252
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPAG 85
Score = 124 bits (299), Expect = 7e-29
Identities = 69/161 (42%), Positives = 95/161 (59%), Gaps = 5/161 (3%)
Frame = +3
Query: 255 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 434
MDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRT
Sbjct: 87 MDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT 146
Query: 435 IRYPDPLIKVNDSIQLDIATTKIMDSSSLSLGTCV*SREAVTWGVWAPSCPA-RDIPAPS 611
IRYPDPLIK ND+I++D+ T KI+D +G V VT G ++
Sbjct: 147 IRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVV----MVTGGRNTGRVGVIKNREKHK 202
Query: 612 TLCTSRTPRDTLRHEVEQRVHN----RQGHEAYISLPRGKG 722
+ D L H R+ N +G++ ++SLP+GKG
Sbjct: 203 GSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKG 243
Score = 69.7 bits (163), Expect = 2e-12
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +2
Query: 509 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGH 643
FIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH
Sbjct: 172 FIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGH 216
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +1
Query: 637 GTHFATRLNNVFIIGKGTK 693
G FATRL NVF IGKG K
Sbjct: 215 GHAFATRLGNVFTIGKGNK 233
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 141 bits (341), Expect = 6e-34
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 180
ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 181 LKIVKQRLIKVDGKVRTDPTYPAG 252
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 78 ISILMQRHVMVDGKVRTDKTYPAG 101
Score = 126 bits (303), Expect = 2e-29
Identities = 57/95 (60%), Positives = 71/95 (74%)
Frame = +3
Query: 255 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 434
MDVVSI KT E FRL+YD KGRF +H I E+AK+KLCKV+ V G K +P+L T+DGRT
Sbjct: 103 MDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRT 162
Query: 435 IRYPDPLIKVNDSIQLDIATTKIMDSSSLSLGTCV 539
IRYPDPLIK ND+I++D+ T KI+D +G V
Sbjct: 163 IRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIV 197
Score = 71.3 bits (167), Expect = 7e-13
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = +2
Query: 509 FIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGH 643
FIKF+ GN+ M+TGGRN GRVG I SRE+H GSF+ +H++D+ GH
Sbjct: 188 FIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGH 232
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 391 DLRMFRTW*RMMAA-PSATQTHLSKSTIPSS*TSQLRRL 504
DL R W +A PS T HLS ++PSS T Q RRL
Sbjct: 208 DLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWRRL 246
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 142 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 41
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 704 RDVRFVPLPIMNTLFNLVAKCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 555
RD R P L + V +C+P S A +CR+SR S+ W P+ S+
Sbjct: 409 RDARLSP----ERLVDAVQRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 155 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 27
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 1
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 39 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 203
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>06_03_0124 -
16942492-16945032,16945478-16945572,16945966-16946076,
16946142-16946229
Length = 944
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +1
Query: 55 LDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTD 234
+++L VY T +E P+ I + E L V ++ G R+
Sbjct: 73 VEELSNVYRGAQETNRKLYQELFPIQIMQMCGWLLKVVRWENLNCVH---MEAHGNRRSS 129
Query: 235 PTYPAGLWMLSQLRRLMNC 291
PTY LWM+S L+ C
Sbjct: 130 PTYLVMLWMISVASLLITC 148
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 291 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 395
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504
Length = 398
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 634 HGTHFATRLNNVFIIGKGTKRTSRCRAARA 723
HG TR V + G G R SRCR+ RA
Sbjct: 89 HGPWADTRFIPVGVDGTGDSRRSRCRSRRA 118
>07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660
Length = 1369
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 603 APSTLCTSRTPRDTLRHEVEQRVHNRQ 683
A ST C +T D + HE+E++V R+
Sbjct: 45 ACSTKCAGKTGADHMSHEIEEKVRARR 71
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 660 QPRGEVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPP 547
+P+ + ++L+C KEPG SRD + P + RPP
Sbjct: 305 RPQTDSSAKKTLICYNCKEPGHYSRDCLQPRQS--RPP 340
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 660 QPRGEVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPP 547
+P+ + ++L+C KEPG SRD + P + RPP
Sbjct: 197 RPQTDSSAKKTLICYNCKEPGHYSRDCLQPRQS--RPP 232
>05_03_0177 - 9245131-9245793
Length = 220
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 655 SWRSVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPRLK 518
SWRSVSRG G S G GA P D + P LK
Sbjct: 170 SWRSVSRG-CGRRRQRGTLPSSRGQGGAWKPPAAPDVDEVRPPLLK 214
>03_02_0277 +
7056341-7056391,7056681-7056764,7057107-7057223,
7057335-7057772,7057889-7058295,7058371-7058470,
7058707-7058793,7059056-7059544
Length = 590
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 665 LFNLVAKCVP--WSP*CAQCRRSRDVSRGTRWCPHAPSY 555
L V C+P P Q RSR G W PH P++
Sbjct: 531 LLRAVESCLPEPLRPAAQQAARSRGGGGGVEWRPHNPAF 569
>02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022
Length = 458
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 506 GFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHI 625
GF+K E G + + GG GR+G + R + D++ +
Sbjct: 119 GFVKREDGPVLDVVGGGGGGRIGLNLGRRTYFSPADVLAV 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,819,436
Number of Sequences: 37544
Number of extensions: 533015
Number of successful extensions: 1706
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1704
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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