Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30045
         (673 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0227 - 1684597-1684727,1685003-1685100,1685176-1685270,168...    34   0.090
03_02_0775 - 11096620-11097240                                         34   0.12 
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491...    30   1.5  
11_01_0703 - 5785599-5785607,5785954-5786008,5786572-5786627,578...    29   2.6  
10_07_0152 + 13439178-13439517,13440072-13440229,13440431-134404...    29   2.6  
02_01_0480 + 3458251-3458631                                           29   2.6  
12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937     29   3.4  
10_08_0873 + 21202630-21204021                                         29   3.4  
02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023...    29   3.4  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    29   4.5  
06_01_1084 + 8883301-8883515,8883736-8884063,8884764-8885022,888...    29   4.5  
12_01_0615 + 5072267-5073253                                           28   5.9  
09_03_0183 - 13198005-13198024,13199044-13199506                       28   5.9  
06_03_0058 + 16083974-16084206,16084664-16084772                       28   5.9  
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783     28   5.9  
01_05_0790 + 25253363-25254136,25259037-25259897                       28   5.9  
12_02_0662 + 21648616-21648766,21650071-21650198,21650598-21650882     28   7.8  
10_08_0814 - 20779400-20779487,20779780-20780030,20780528-207808...    28   7.8  
05_05_0385 + 24566916-24567503,24568609-24568824,24568916-245692...    28   7.8  
04_01_0194 - 2275060-2275347,2276066-2276077                           28   7.8  
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162...    28   7.8  

>05_01_0227 -
           1684597-1684727,1685003-1685100,1685176-1685270,
           1685360-1685545,1686185-1686298,1686583-1686684,
           1686811-1687096,1687242-1687291,1687351-1687479,
           1687590-1687724,1688163-1688165
          Length = 442

 Score = 34.3 bits (75), Expect = 0.090
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -1

Query: 448 VQKLVAPVNSVQFMSQWKYLKGQDEVRSYYLSIIEPSRIPSMFANALESDVLSELIR 278
           V+ +  P  +  F   W+ L      ++  L  I PS +P +F NAL +  L ++++
Sbjct: 304 VKSVKTPKTAYDFEVSWRALSNDTAKQTQLLKSIPPSSLPEIFKNALSAAFLIDIVK 360


>03_02_0775 - 11096620-11097240
          Length = 206

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = +3

Query: 171 GGEEHRQRREPLDLGERREVGRDGSVAELGAWSCSAR 281
           GG   R RR P   G RR  G+ G VAE G W C  R
Sbjct: 137 GGAWRRGRRGPWRCG-RRHGGQFGGVAEAGVWCCDRR 172


>12_02_1167 +
           26647293-26648356,26648493-26648577,26649129-26649191,
           26649381-26649443,26649987-26650070,26650229-26650783
          Length = 637

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 436 PVSAHPSPWPLPPISTSPTQD*ICPCTLIVDYS 534
           P  A PSP P+P    SP  + + PC L +  S
Sbjct: 54  PAPAPPSPAPVPASPPSPAAESVAPCLLTLQCS 86


>11_01_0703 -
           5785599-5785607,5785954-5786008,5786572-5786627,
           5786750-5786923,5787509-5787694,5787892-5788048,
           5788144-5788372,5788909-5789167,5789453-5789554
          Length = 408

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 663 LKTIPIHEIQLGKTTEKLLSHLNLIENEVNHPDETVNNESNK 538
           L+ +P H  +      KL SHLNL E + NH  +  N+  +K
Sbjct: 318 LEKLPSHNNESVTLESKLPSHLNLNETKENHEADHHNSSCSK 359


>10_07_0152 +
           13439178-13439517,13440072-13440229,13440431-13440477,
           13441115-13441178,13441600-13442237,13442328-13442562
          Length = 493

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -3

Query: 488 GEVDIGGSGHGEGCAETGGARQ*CAVHVPVEVPQRSRRGQKLL 360
           GE   GG G G G     G  +     V   VPQR+ +G  LL
Sbjct: 8   GEGTSGGGGGGGGAVPEAGGPEIAFFDVETSVPQRAGQGYALL 50


>02_01_0480 + 3458251-3458631
          Length = 126

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 270 TTTRPVPPQNRRGLPHGAHPGQEVLGAGDVPLRHRQATSKKSI 142
           T  + V  Q + G PH   P + + GAG  PLR R   ++  +
Sbjct: 58  TPPQVVAEQQQGGAPHFVVPARGLGGAGRYPLRRRMCAARSVV 100


>12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937
          Length = 418

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 433 PPVSAHPSPWPLPPISTSPTQD*ICPCTLIVDYS 534
           P + A PSP P+P    SP  + + PC L +  S
Sbjct: 44  PFLPAPPSPAPVPASPPSPAAESVAPCLLTLQCS 77


>10_08_0873 + 21202630-21204021
          Length = 463

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +3

Query: 156 MSLVGGGEEHRQRREPLDLGERREVGRDGSVAELGAWSCSARMSSDSTSLSRAFANIDGI 335
           ++ VG GE  R R   L++  R    R GS AEL   +  A   +   +L R    +  +
Sbjct: 386 LAAVGEGEVRRMRERALEMAPRVLYRRHGSTAELSETAKDAVDLAVDGALRRIRRRVRAL 445

Query: 336 RDG 344
            DG
Sbjct: 446 DDG 448


>02_05_1276 +
           35397948-35398298,35398937-35401738,35402085-35402306,
           35402503-35402562,35402615-35402698,35402740-35402816,
           35403147-35403363
          Length = 1270

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 427 RAPPVSAHPSPWPLPPISTSPTQD 498
           R PP  A  SP P PP +T P+ D
Sbjct: 18  RTPPPPASSSPSPPPPAATPPSHD 41


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 433 PPVSAHPSPWPLPPISTSPTQ 495
           PP   HP+P P PP++ +P Q
Sbjct: 239 PPPPHHPAPRPPPPMAAAPRQ 259


>06_01_1084 +
           8883301-8883515,8883736-8884063,8884764-8885022,
           8885581-8885681
          Length = 300

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 345 SRP-GYRRCSRTLLRATYCRSSSARCTTTRP 256
           +RP G   CSR   R++ C + +A+C T RP
Sbjct: 128 TRPSGTSSCSRWRSRSSVCVAQAAKCATDRP 158


>12_01_0615 + 5072267-5073253
          Length = 328

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -2

Query: 339 PGYRRCSRTLLRATYCRSSSARCTTTRPVPPQNR 238
           PG R C+  + R  + R SS R TTT   P   R
Sbjct: 103 PGRRLCAHGVKRHAFFRRSSRRLTTTMLAPRPRR 136


>09_03_0183 - 13198005-13198024,13199044-13199506
          Length = 160

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 425 DGRHQFLHILLRGHCLRYQLHRLRTRYV 508
           +GRH   H+LLR H     + R   RY+
Sbjct: 10  EGRHHVRHLLLRSHHCGPSMRRTMVRYI 37


>06_03_0058 + 16083974-16084206,16084664-16084772
          Length = 113

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -2

Query: 630 GKTTEKLLSHLNLIENEVNHPDETVNNESNKTGIVNDKG---AGTYLV 496
           GKT +    H   +EN++   D T  + SN  G  + +G   +G Y++
Sbjct: 38  GKTADDAKRHYKKLENDIGRIDSTGASSSNSNGRSSSEGQSFSGKYIL 85


>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
          Length = 1439

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 26/69 (37%), Positives = 29/69 (42%)
 Frame = -3

Query: 440 TGGARQ*CAVHVPVEVPQRSRRGQKLLFEYHRAVPDTVDVRERS*ERRTVGAHPRAARPR 261
           TG  R   A  V  E P+ S R         RA P  V  R R    R+    PRAARPR
Sbjct: 50  TGRGRARAAERVGEEAPRGSGR---------RAAP-VVASRRRRRRSRSRSRSPRAARPR 99

Query: 260 AQFRHRTVA 234
           A+   R  A
Sbjct: 100 AESSRRPTA 108


>01_05_0790 + 25253363-25254136,25259037-25259897
          Length = 544

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 297 YCRSSSARCTTTRPVPP 247
           YCRSSSA  TTT+P PP
Sbjct: 32  YCRSSSA--TTTKPPPP 46


>12_02_0662 + 21648616-21648766,21650071-21650198,21650598-21650882
          Length = 187

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 427 RAPPVSAHPSPWPLPPISTSP 489
           RAPP  A P P  LPP   SP
Sbjct: 13  RAPPTPAPPRPHHLPPAPPSP 33


>10_08_0814 -
           20779400-20779487,20779780-20780030,20780528-20780812,
           20781563-20782008,20782095-20782485
          Length = 486

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 433 PPVSAHPSPWPLPPISTSP 489
           PP ++HP+P P PP++ SP
Sbjct: 53  PPSASHPAP-PSPPLAVSP 70


>05_05_0385 +
           24566916-24567503,24568609-24568824,24568916-24569241,
           24569906-24570338,24570769-24571281
          Length = 691

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 288 SSSARCTTTRPVPPQNRRGLPHGAHPGQEVLGAGDVPLRHRQ 163
           S+ A  +++   PP + RG  HG  P  EV     + LR RQ
Sbjct: 6   STRASTSSSSSSPPGDARGPEHGGTPRGEVSSKRRLVLRRRQ 47


>04_01_0194 - 2275060-2275347,2276066-2276077
          Length = 99

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -3

Query: 275 AARPRAQFRHRTVAAYLTALTQVKRFSALAMFLSATDKRHLKNLLEYCRNEEKCSEQDI 99
           AA  R   ++++  A +  L Q  + SAL M + A DK       +YC  E+K    +I
Sbjct: 9   AASRRLNVKNKSYEAQIAGLNQ--QISALQMKIQALDKYWQNRNRDYCELEKKFKALEI 65


>02_01_0246 +
           1617326-1617367,1618903-1624419,1625040-1625498,
           1625603-1625887,1626016-1626030,1626339-1626419,
           1626909-1627322,1627423-1627719,1627801-1629864
          Length = 3057

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = -2

Query: 642 EIQLGKTTEKLLSHLNLIENEVNHPDETVNNESNKTGIVNDKGAGTY 502
           E  L  T   L  H+N  EN  N     +N ES +    +  G  TY
Sbjct: 72  EHSLNGTASSLNGHVNKEENISNEQPHEINQESQEQVETSSDGTSTY 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,430,920
Number of Sequences: 37544
Number of extensions: 358336
Number of successful extensions: 1823
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1818
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)