Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10454
(824 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 93 2e-19
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 91 7e-19
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 87 2e-17
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 79 3e-15
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 77 2e-14
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 76 3e-14
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 74 2e-13
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 73 3e-13
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 71 1e-12
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 69 5e-12
10_01_0065 + 845447-846187,846969-847193 66 2e-11
10_01_0066 + 848523-849269,849520-849741 62 5e-10
04_01_0350 - 4610444-4610668,4612181-4612969 62 5e-10
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 59 4e-09
05_05_0084 - 22262007-22262300,22262435-22262707,22263418-222634... 54 2e-07
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 54 2e-07
10_08_0636 + 19478723-19478869,19479984-19480212,19480321-194804... 39 0.006
07_01_0316 + 2226010-2226256,2226956-2227047,2227143-2227180,222... 35 0.090
02_05_1228 + 35086576-35087139,35089125-35089268,35090436-350906... 35 0.090
04_03_0438 + 15929220-15929453,15929564-15929764,15930874-159310... 33 0.36
04_01_0476 + 6215401-6217445,6217538-6217630,6218031-6218133,621... 33 0.36
12_01_1061 + 10964571-10964927,10965393-10965425,10965865-109659... 32 0.48
06_01_1088 - 8926361-8927301,8927437-8927705,8927850-8929023,892... 31 1.5
03_05_0299 + 22887603-22887797,22887891-22887986,22888089-228881... 31 1.5
01_02_0075 + 10873789-10873871,10873883-10874420 31 1.5
06_01_1090 - 8945909-8946125,8946607-8947562,8947733-8949835 30 1.9
12_01_0417 - 3296066-3296356,3296491-3296541,3296657-3296862,329... 30 2.6
08_01_0329 - 2962018-2962695 30 2.6
04_03_0447 + 16015043-16015489,16017358-16017530,16017906-160180... 30 2.6
04_03_0958 - 21241230-21241327,21241693-21241893,21241989-212421... 29 3.4
04_03_0664 + 18501248-18502802,18503370-18505054 29 4.5
04_03_0437 + 15920806-15920811,15921257-15921429,15921515-159215... 29 4.5
03_03_0265 - 16000085-16000319,16001730-16001854,16004323-16005492 29 4.5
06_03_0089 - 16475677-16476309 29 5.9
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 29 5.9
05_03_0103 + 8422250-8422813 29 5.9
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 8/100 (8%)
Frame = +3
Query: 228 YRH--CGNL-LHEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH C +E ++G A+KK EG+VKRED+F+T+KLW TNH E V AL +L++
Sbjct: 40 YRHIDCAQAYFNEKEIGVALKKVFDEGIVKREDIFITSKLWCTNHAPEDVPVALDSTLQD 99
Query: 399 LDLDYVNLYLIHWPIALHENA-----SISQTDYVETWQAM 503
L DYV+LYLIHWP+ + + A ++ TD TW AM
Sbjct: 100 LQTDYVDLYLIHWPVRMKKGAGFGGQNVLPTDIPATWAAM 139
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = +2
Query: 470 PNRLRGDVASYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSAL 649
P + A+ +++ + G ++IGVSNF+ ++LE L + V P+V QVE + QQ+ L
Sbjct: 129 PTDIPATWAAMEKLHDSGKARAIGVSNFSSKKLEDLLAVARVPPAVDQVECHPVWQQTKL 188
Query: 650 LDYCKAQGIVVVAYTPFGN 706
+C ++GI + AY+P G+
Sbjct: 189 RKFCTSKGIHLSAYSPLGS 207
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/67 (35%), Positives = 33/67 (49%)
Frame = +1
Query: 85 LAPVLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTRTR 264
+A LN G +IP G+GTW + + V +V A+ AGYRHID A Y
Sbjct: 1 MARCFVLNTGAKIPSVGLGTW------QAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKE 54
Query: 265 SDVPLRR 285
V L++
Sbjct: 55 IGVALKK 61
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 91.5 bits (217), Expect = 7e-19
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 9/101 (8%)
Frame = +3
Query: 228 YRH--CGNLL-HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH C + +E++VG A+KK EGVVKREDLF+T+KLW H E V +L K+L +
Sbjct: 40 YRHIDCARMYKNENEVGIALKKLFEEGVVKREDLFITSKLWCDCHAPEDVPESLDKTLSD 99
Query: 399 LDLDYVNLYLIHWPIALHENASISQT-DYV-----ETWQAM 503
L L+Y++LYLIHWP + + + IS T DY+ TW AM
Sbjct: 100 LQLEYLDLYLIHWPFRVKKGSGISNTEDYIPPDIPSTWGAM 140
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/68 (35%), Positives = 46/68 (67%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVV 682
+++ + G +++IGVSNF+ ++L L + V P+V QVE + QQ+ L ++C++ G+ +
Sbjct: 141 EKLYDSGKSRAIGVSNFSSKKLGDLLAVACVPPAVDQVECHPGWQQTKLHNFCQSTGVHL 200
Query: 683 VAYTPFGN 706
AY+P G+
Sbjct: 201 SAYSPLGS 208
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 103 LNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTRTRSDVPLR 282
LN G +IP G+GTW + + GD V +V+ AGYRHID A +Y + L+
Sbjct: 7 LNTGAKIPSVGLGTW--QSDPGVVGDAVYAAVK----AGYRHIDCARMYKNENEVGIALK 60
Query: 283 R 285
+
Sbjct: 61 K 61
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 87.0 bits (206), Expect = 2e-17
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Frame = +3
Query: 228 YRH--CGNLLHEDQ--VGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLK 395
YRH C L +Q +G A+KK +GVVKREDLF+T+K+W ++ E V A+ +LK
Sbjct: 40 YRHIDCAPLYKNEQEVIGGALKKLFDDGVVKREDLFITSKIWCSDLAPEDVPLAMDSTLK 99
Query: 396 NLDLDYVNLYLIHWPIALHENASISQTDYVE-----TWQAMTE 509
+L LDYV+LYLIHWP + + +S ++V+ TW+AM +
Sbjct: 100 DLQLDYVDLYLIHWPFQIKKGTELSPENFVKPDIPSTWRAMEQ 142
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +2
Query: 473 NRLRGDVASYDRVLNQ----GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQ 640
N ++ D+ S R + Q G ++IGVSNF+ ++L L V P+V QVE + QQ
Sbjct: 127 NFVKPDIPSTWRAMEQLYDSGKARAIGVSNFSSKKLGDLLCVARVPPAVDQVECHPGWQQ 186
Query: 641 SALLDYCKAQGIVVVAYTPFGNL 709
+ L +C G+ + AY P G +
Sbjct: 187 AKLRAFCHTSGVHLSAYAPLGRM 209
Score = 35.9 bits (79), Expect = 0.039
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 85 LAPVLKLNNGKEIPGFGIGTW-LGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
+A LN G IP G+GT+ GT V V A+ AGYRHID A +Y
Sbjct: 1 MATHFTLNTGARIPSVGLGTYKAGTGV-------VADVVSAAVKAGYRHIDCAPLY 49
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = +3
Query: 228 YRHCGNLLH---EDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH E +VG+ +K + G+ R+DLFVT+K+W TN E V PAL+ +LK+
Sbjct: 93 YRHVDTAAQYGIEQEVGKGLKAAMEAGI-NRKDLFVTSKIWCTNLAPERVRPALKNTLKD 151
Query: 399 LDLDYVNLYLIHWPIALHENA 461
L LDY++LYLIHWP L + A
Sbjct: 152 LQLDYIDLYLIHWPFRLKDGA 172
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVV 682
+R++ GL K IGV NF++ +L RL + P+ +E++ + + + + CK GI V
Sbjct: 194 ERLVTDGLVKDIGVCNFSVTKLNRLLQSANIPPA---MEMHPGWKNNKIFEACKKHGIHV 250
Query: 683 VAYTPFGN 706
AY+P G+
Sbjct: 251 TAYSPLGS 258
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Frame = +3
Query: 228 YRHCGNLLH---EDQVGRAIKKKIAEGVV-KREDLFVTTKLWNTNHKKEAVLPALRKSLK 395
YRH H E +G A + + G + R DLF+T+KLW ++ ++ VLPALR++L
Sbjct: 44 YRHFDTAAHYETEAPIGEAAAEAVRSGAIASRADLFITSKLWCSDAHRDRVLPALRQTLW 103
Query: 396 NLDLDYVNLYLIHWPIAL---HENASISQTDYV-----ETWQAMTE 509
NL ++YV+LYL+HWP+++ A + D+V W+AM E
Sbjct: 104 NLQMEYVDLYLVHWPVSMKPGRYKAPFTADDFVPFDMRAVWEAMEE 149
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTPF 700
GL K+IGV NF+ ++L+ L S + P+V QVE+N QQ L + C+ +G+ + AY+P
Sbjct: 154 GLAKAIGVCNFSCKKLDTLLSFATIPPAVNQVEVNPVWQQRKLRELCREKGVQICAYSPL 213
Query: 701 G 703
G
Sbjct: 214 G 214
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 112 GKEIPGFGIG-TWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYST 255
G + GFG+ +GT + + ++++V AI+AGYRH DTAA Y T
Sbjct: 7 GAKGAGFGMPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYET 55
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 76.2 bits (179), Expect = 3e-14
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = +3
Query: 228 YRH---CGNLLHEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH + +E +VG A+ + G+VKREDLF+TTKLWN++H V+ A + SLK
Sbjct: 48 YRHFDCAADYQNEAEVGDALAEAFQTGLVKREDLFITTKLWNSDHGH--VVEACKDSLKK 105
Query: 399 LDLDYVNLYLIHWPIA 446
L LDY++LYLIH+P+A
Sbjct: 106 LRLDYLDLYLIHFPVA 121
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Frame = +2
Query: 509 VLNQGLTKSIGVS---------NFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYC 661
+++ GL +SIG+ N++I + + P+V Q+E + Q+ L+ +C
Sbjct: 158 LVSMGLVRSIGIRGSQLLESNHNYDIFLTRDCLAYAKIKPAVNQIETHPYFQRDCLVKFC 217
Query: 662 KAQGIVVVAYTPFG 703
+ GI+V A+TP G
Sbjct: 218 QKHGILVTAHTPLG 231
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 79 AGLAPVLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
+G+ L L++G +P G+G W + ++ + A+ GYRH D AA Y
Sbjct: 7 SGVPAALALSSGHTMPSVGLGVW------RMDSPAIRDLIHSALRIGYRHFDCAADY 57
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 EDQVGRAIKKKIAEGVV-KREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
E +G AI + G+V RE++FVTTKLW T VLP+LR+SL+NL ++YV+LYL+
Sbjct: 59 EAPLGEAIAEATRRGLVASREEVFVTTKLWCTQCHPGLVLPSLRESLRNLQMEYVDLYLV 118
Query: 432 HWPIAL 449
HWPI++
Sbjct: 119 HWPISV 124
Score = 61.7 bits (143), Expect = 7e-10
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTPF 700
GL K+IGVSNF + L++L + + P+V QVE+N QQ + +YC A+GI V AY+P
Sbjct: 157 GLAKAIGVSNFTTKHLDKLLAVATIPPAVNQVEMNPVWQQRTVREYCAAKGIRVAAYSPL 216
Query: 701 G 703
G
Sbjct: 217 G 217
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 97 LKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYST 255
L+ G+ +P G+GT +S + + + A++ G+RH DTAA+Y T
Sbjct: 9 LRHGAGRPMPAVGVGT---ADSAATSPETKRGAALAALEVGFRHFDTAALYGT 58
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 72.9 bits (171), Expect = 3e-13
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
Frame = +3
Query: 255 EDQVGRAIKKKIAEGVVK-REDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
E VG A+ GV+ RE++FVTTK+W T + VLP+LR+SL+NL ++YV++YL+
Sbjct: 70 ERVVGEAVAGAARRGVIACREEVFVTTKVWCTQCHPDLVLPSLRESLQNLQMEYVDMYLV 129
Query: 432 HWPIALH--------ENASISQTDYVETWQAMTE 509
HWP+++ + I D WQAM E
Sbjct: 130 HWPMSVKPTKPHYPMKREDIMPMDLRGVWQAMEE 163
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/102 (36%), Positives = 55/102 (53%)
Frame = +2
Query: 470 PNRLRGDVASYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSAL 649
P LRG + + GL K IGVSNF ++L+ L + + P+V QVE+N QQ L
Sbjct: 151 PMDLRGVWQAMEECHQLGLAKMIGVSNFTTKKLQELLAFAKIPPAVNQVELNPVWQQKKL 210
Query: 650 LDYCKAQGIVVVAYTPFGNLFNRQPSAPAPRADDQRLVPSPK 775
+++CKA+GI V AY P G + P +D + + + K
Sbjct: 211 MEFCKAKGIHVTAYFPLGGRHSTSTVNPVLDSDVLKEIAAAK 252
Score = 35.1 bits (77), Expect = 0.068
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +1
Query: 112 GKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYST 255
G+ +P G+GT + + + + ++ A++ GYRHIDTA++Y +
Sbjct: 25 GRAVPAVGLGT---ASLRSVGEESFRGALLAALEVGYRHIDTASVYGS 69
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/66 (46%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 EDQVGRAIKKKIAEGVV-KREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
E +G A+ + + G+V R+DL++T+KLW ++ VLPALR++L+NL + Y++LYLI
Sbjct: 72 EAPLGEAVLEAVRAGMVASRDDLYITSKLWISDTHPGRVLPALRRTLRNLQMVYIDLYLI 131
Query: 432 HWPIAL 449
HWPI L
Sbjct: 132 HWPIRL 137
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTPF 700
GLTK+IGVSNF ++L L S + P+ QVEIN +Q+ L ++CK + I + AY+P
Sbjct: 171 GLTKAIGVSNFTCKKLNTLLSFATIPPAANQVEINPYCRQNKLREFCKEKEIQLCAYSPL 230
Query: 701 G 703
G
Sbjct: 231 G 231
Score = 42.3 bits (95), Expect = 5e-04
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +1
Query: 76 SAGLAPVLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYST 255
+A P L +GK +P G+GT V+ +V AIDAGYRH DTAA Y T
Sbjct: 12 AAATIPEAALRSGKPMPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGT 71
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 68.9 bits (161), Expect = 5e-12
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
Frame = +3
Query: 255 EDQVGRAIKKKIAEGVV-KREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
E +G AI + G++ RE+ FVTTKLW T + VLP+LR+SL+NL ++YV+LYLI
Sbjct: 59 EAPLGEAIAEATRRGLLASREEAFVTTKLWCTQCHPDLVLPSLRESLRNLQMEYVDLYLI 118
Query: 432 HWPIALH--------ENASISQTDYVETWQAMTE 509
H PI++ + + D+ W+AM E
Sbjct: 119 HLPISVKPGPMVFPVKKEDVVPFDFGGVWRAMEE 152
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTPF 700
GL K+IGVSNF + +++L + + P+V QVE+N QQ + +YC A+GI V AY+P
Sbjct: 157 GLAKAIGVSNFTTKHIDKLLAVATILPAVNQVEMNPTWQQRTVREYCDAKGIRVTAYSPL 216
Query: 701 G 703
G
Sbjct: 217 G 217
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 94 VLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYST 255
VL+ + + +P G+G ++ E D V A++AG+RH DTA++Y T
Sbjct: 9 VLRHGDARPMPAVGMGVAEYPSTPERTRDAVLA----ALEAGFRHFDTASLYRT 58
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 EDQVGRAIKKKIAEGVV-KREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
E VG A+ + + G++ R D+FVT+K+W ++ V+PA R++L+NL +DYV+L L+
Sbjct: 58 EGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLV 117
Query: 432 HWPIAL 449
HWP++L
Sbjct: 118 HWPVSL 123
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTPF 700
GL ++IGVSNF+ ++LE+L S V P+V QVE+N QQ L + C+ +G+ + Y+P
Sbjct: 157 GLARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTLREVCRREGVQLCGYSPL 216
Query: 701 G 703
G
Sbjct: 217 G 217
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 205 AIDAGYRHIDTAAIYST 255
AI+ GYRH DTA IY+T
Sbjct: 41 AIELGYRHFDTARIYAT 57
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 255 EDQVGRAIKKKIAEGVV-KREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
E V A+ + + G+V R D+FVT+KLW ++ V+PA R++L+NL +DYV+L L+
Sbjct: 60 EGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLV 119
Query: 432 HWP 440
HWP
Sbjct: 120 HWP 122
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTPF 700
GL ++IGVSNF+ ++LE+L S V P+ QVE+N QQ L + C+ +G+ + Y+P
Sbjct: 159 GLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLREVCRREGVQLCGYSPL 218
Query: 701 G 703
G
Sbjct: 219 G 219
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 178 DEVQKSVEWAIDAGYRHIDTAAIYST 255
+E ++ AI+ GYRH DTA +Y+T
Sbjct: 34 EETTAALLRAIELGYRHFDTARLYAT 59
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 EDQVGRAIKKKIAEGVV-KREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
E VG A+ + + G V R +LFVTTKL + V+ ALR+SL L LDYV+L+LI
Sbjct: 71 EGAVGAAVAEAVRCGAVASRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLI 130
Query: 432 HWPIAL 449
HWP+A+
Sbjct: 131 HWPVAI 136
Score = 58.8 bits (136), Expect = 5e-09
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTPF 700
GL +SIGVSNF+ ++ RL + V P+V QVE+N+ +Q + + C G+VV AY+P
Sbjct: 173 GLARSIGVSNFSAAKMSRLLALAAVPPAVNQVEMNVGWRQEKVREVCGEGGVVVAAYSPL 232
Query: 701 G 703
G
Sbjct: 233 G 233
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 76 SAGLAPVLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYST 255
+A P + LN+G +P G GT T +L ++ A+ GYRH+DTAA+Y T
Sbjct: 16 AATAVPCVTLNSGHAMPVLGFGTGSSTPPADLAA-----TIAHAVRLGYRHLDTAAVYGT 70
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 59.3 bits (137), Expect = 4e-09
Identities = 23/63 (36%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +3
Query: 264 VGRAIKKKIAEGVV-KREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLIHWP 440
+G A+ + + G+V R++L++T+KLW + VLP+LR++L+ + ++Y++LYLIH+P
Sbjct: 59 LGDAVAEAVRAGLVASRDELYITSKLWVAHAHPGHVLPSLRRALRKMQMEYLDLYLIHFP 118
Query: 441 IAL 449
+++
Sbjct: 119 VSM 121
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 10/71 (14%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPS----------VLQVEINLNLQQSALLDYCKAQ 670
GLTK+IGVSNF+ ++LE L S ++P+ +++VE++ +Q+ L ++CK +
Sbjct: 156 GLTKAIGVSNFSCKKLETLLSFATISPAANQLKVRLFQIVEVEVHPYCRQNKLREFCKEK 215
Query: 671 GIVVVAYTPFG 703
GI + AY+P G
Sbjct: 216 GIQLCAYSPLG 226
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 91 PVLKLNNGKEIPGFGIGTW---LGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYST 255
P L++GK +P G+GT LG D V + AI+AGYRH DTAA+Y T
Sbjct: 2 PEAALSSGKPMPRVGMGTASFPLGATDPSTVKDVVLR----AIEAGYRHFDTAAVYQT 55
>05_05_0084 -
22262007-22262300,22262435-22262707,22263418-22263468,
22263944-22264035,22264715-22264724
Length = 239
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +2
Query: 458 RLNFPNRLRGDVAS----YDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEIN 625
+L+ N L+ D+ + +++ + G ++IGVSNF+ ++LE L + V P+V QVE +
Sbjct: 63 KLSVENYLKPDIPATWQAMEKLYDSGKARAIGVSNFSCKKLEDLLNVARVPPAVNQVECH 122
Query: 626 LNLQQSALLDYCKAQGIVVVAYTPFGN 706
QQ L C+++G+ + AY P G+
Sbjct: 123 PVWQQGKLRKLCQSKGVHLSAYAPLGS 149
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/71 (36%), Positives = 47/71 (66%)
Frame = +2
Query: 494 ASYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQG 673
A+ +++ + G +++IGVSNF+ ++L L + V P+V QVE + QQ L ++C++ G
Sbjct: 143 AAMEKLYDSGKSRAIGVSNFSSKKLGDLLAAARVPPAVDQVECHPGWQQMKLHNFCQSTG 202
Query: 674 IVVVAYTPFGN 706
I + AY+P G+
Sbjct: 203 IHLSAYSPLGS 213
Score = 45.6 bits (103), Expect = 5e-05
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Frame = +3
Query: 228 YRH--CGNLLH-EDQVGRAIKKKIAEGVVKREDLF-VTTKLWN----TNHKKEAVLPALR 383
YRH C + + E +VG A+KK E ++ + L +L +H E V AL
Sbjct: 40 YRHIDCASAYNNEKEVGLALKKLFEEVELEFQCLLGALLQLIRGDGCDHHAPEDVPEALD 99
Query: 384 KSLKNLDLDYVNLYLIHWPIALHENASISQ------TDYVETWQAM 503
+L +L L+Y++LYLIHWP + +SI + D TW AM
Sbjct: 100 ATLNDLQLEYLDLYLIHWPFRTKKGSSIGKPESYLPPDIPSTWAAM 145
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 103 LNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTRTRSDVPLR 282
LN G +IP G+GTW + V +V A+ AGYRHID A+ Y+ + L+
Sbjct: 7 LNTGAKIPSVGLGTW------QSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALK 60
Query: 283 R 285
+
Sbjct: 61 K 61
>10_08_0636 +
19478723-19478869,19479984-19480212,19480321-19480414,
19480598-19480721,19480922-19481023,19481103-19481254,
19481353-19481446,19481642-19481827
Length = 375
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = +2
Query: 518 QGLTKSIGVSNFNIQQLERLK---SEGGVTPSVLQVE---INLNLQQSALLDYCKAQGIV 679
+GL +++GVSN+ +QL ++ S GV S QV+ +++ +Q L C + GI
Sbjct: 198 KGLVRAVGVSNYGPKQLLKIHSHLSSRGVPLSSAQVQFSLLSMGDEQMELKTVCDSLGIR 257
Query: 680 VVAYTPFG 703
++AY+P G
Sbjct: 258 LIAYSPLG 265
>07_01_0316 +
2226010-2226256,2226956-2227047,2227143-2227180,
2227289-2227450,2227540-2227562,2227673-2227744,
2227858-2228025,2228318-2228400,2228533-2228595,
2228735-2228917
Length = 376
Score = 34.7 bits (76), Expect = 0.090
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 363 AVLPALRKSLKNLDLDYVNLYLIHWP 440
+VL AL+KSL L L V LY +HWP
Sbjct: 156 SVLSALKKSLDRLGLSSVELYQLHWP 181
Score = 33.5 bits (73), Expect = 0.21
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Frame = +2
Query: 518 QGLTKSIGVSNFNIQQLE----RLKSEGGVTPSVLQVEINL---NLQQSALLDYCKAQGI 676
QGL K++GVSN+N ++L R+K GV + QV +L + + + C GI
Sbjct: 199 QGLVKAVGVSNYNEKRLRDAYARMKKR-GVPLAANQVNYSLIYRTPELNGVKAACDELGI 257
Query: 677 VVVAYTP 697
++AY+P
Sbjct: 258 TLIAYSP 264
>02_05_1228 +
35086576-35087139,35089125-35089268,35090436-35090600,
35090722-35090796,35091468-35091671
Length = 383
Score = 34.7 bits (76), Expect = 0.090
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +3
Query: 306 KREDLFVTTKL-WN---TNHK---KEAVLPALRKSLKNLDLDYVNLYLIHWPIA 446
+R D+ V+TKL W N K ++ ++ LR SLK LD+DYV++ H P A
Sbjct: 73 RRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPDA 126
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/77 (20%), Positives = 31/77 (40%)
Frame = +1
Query: 109 NGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTRTRSDVPLRRR 288
+G + G W+ T N+L E + ++ DAG D A +Y+ ++ +
Sbjct: 9 SGLRVSQLSYGAWV-TFGNQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQAM 67
Query: 289 SQREWSREKICSSLQSY 339
W R + S + +
Sbjct: 68 RDLGWRRSDVVVSTKLF 84
>04_03_0438 +
15929220-15929453,15929564-15929764,15930874-15931046,
15931131-15931233,15931763-15932107
Length = 351
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/74 (22%), Positives = 35/74 (47%)
Frame = +2
Query: 491 VASYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQ 670
+ +++ +G K IG+S + + R + +T L+ + + ++ C+
Sbjct: 146 IGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEDIIPTCREL 205
Query: 671 GIVVVAYTPFGNLF 712
GI +VAY+P G F
Sbjct: 206 GIGIVAYSPLGRGF 219
>04_01_0476 +
6215401-6217445,6217538-6217630,6218031-6218133,
6218237-6218254
Length = 752
Score = 32.7 bits (71), Expect = 0.36
Identities = 23/87 (26%), Positives = 41/87 (47%)
Frame = +3
Query: 240 GNLLHEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVN 419
G+ L VG +K K+ E K + KLW K++ ++PALR S L D++
Sbjct: 416 GSPLAAQTVGNLLKFKLDE---KHWETVNGRKLWQIEQKEDGIMPALRLSYVRLP-DHLK 471
Query: 420 LYLIHWPIALHENASISQTDYVETWQA 500
+I++ + +N + + W+A
Sbjct: 472 QCIIYFAL-FPKNYQLRGDALIRMWRA 497
>12_01_1061 +
10964571-10964927,10965393-10965425,10965865-10965909,
10966209-10966220
Length = 148
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -3
Query: 537 MDLVRPWFKTRS*LATSPRNLFGKLRRFRAERSASELNIDSRNPNPNSSMIS 382
M + KT S L PR+L G+L R+R +R + N+DS +P + IS
Sbjct: 73 MTMTATVMKTTSGLL-QPRHLSGRLHRWRHQRLCLDTNLDSTEKSPATICIS 123
>06_01_1088 -
8926361-8927301,8927437-8927705,8927850-8929023,
8929132-8929399
Length = 883
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 225 AYRHCGNLLHEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKS 389
A R CG+ L +GR + ++ V+ + ++LW H++ +LPAL+ S
Sbjct: 377 ASRLCGSPLAAKTIGRLLNMELT---VQHWETVRNSELWELPHRENEILPALQLS 428
>03_05_0299 +
22887603-22887797,22887891-22887986,22888089-22888172,
22888573-22888733,22889458-22889575,22889914-22890049,
22890351-22890529,22890690-22890929
Length = 402
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 375 ALRKSLKNLDLDYVNLYLIHWP 440
++ KSL L DY++L IHWP
Sbjct: 159 SVEKSLSRLSTDYIDLLQIHWP 180
>01_02_0075 + 10873789-10873871,10873883-10874420
Length = 206
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3
Query: 771 GDGTRRWSSARGAGADGWR 715
G G RRW RGAG+DGWR
Sbjct: 76 GGGDRRW---RGAGSDGWR 91
>06_01_1090 - 8945909-8946125,8946607-8947562,8947733-8949835
Length = 1091
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 225 AYRHCGNLLHEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKS 389
A R CG+ L GR + K+ V+ + ++LW H+ +LPAL+ S
Sbjct: 416 ASRLCGSPLVAKTTGRLLNMKLT---VQHWETVQNSELWELPHRDNEILPALQLS 467
>12_01_0417 -
3296066-3296356,3296491-3296541,3296657-3296862,
3296944-3297237,3297335-3297533,3297620-3297679,
3297786-3297975,3298112-3298245,3298339-3298602,
3299158-3299344,3299476-3299540,3299622-3299776,
3300650-3300735,3301240-3301478
Length = 806
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -2
Query: 418 FT*SKSKFFNDFLRAGKTASFLWFVFHSFVVTNRSSLLTTPSAIFFLMARPTWSSWS 248
+T K + FL S LW F F N++ +L I+ L + WS W+
Sbjct: 347 YTLPKEELLELFLTVSSQLSLLWNAFLKFHRINKTKILDYLRDIWALDRKSEWSIWT 403
>08_01_0329 - 2962018-2962695
Length = 225
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 148 LGTNSNELKGDEVQKSVEWAIDAGYRHIDTA 240
LG S+E + DEV K + WA+DA + TA
Sbjct: 131 LGGESDEDEDDEVDKVMRWAMDAARLDVATA 161
>04_03_0447 +
16015043-16015489,16017358-16017530,16017906-16018008,
16018177-16018521
Length = 355
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +2
Query: 506 RVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVV 685
+++ +G K IG+S + + R +T ++ + + ++ C+ GI +V
Sbjct: 155 KLVEEGKIKYIGLSEASASTIRRAHVVHPITAVQIEWSLWSRDVEEDIVPTCRELGIGIV 214
Query: 686 AYTPFGNLF 712
AY+P G F
Sbjct: 215 AYSPLGRGF 223
>04_03_0958 -
21241230-21241327,21241693-21241893,21241989-21242110,
21242462-21242536,21242626-21242714,21242808-21242888,
21243552-21243674
Length = 262
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 336 LWNTNHKKEAVLPALRKSLKNLDLDYVNLYLIHWPIALHENASISQTDYVETWQAMTE 509
L N E V+ A+ +++ N + V L L + LH+N SI D +TW+ + E
Sbjct: 39 LLQDNATDEIVIKAMGRAI-NKTVAIVEL-LKRRIVGLHQNTSIESIDITDTWEPLEE 94
>04_03_0664 + 18501248-18502802,18503370-18505054
Length = 1079
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 312 EDLFVTTKLWNTNHKKEAV-LPALRKSLKNLDLDYVNLYLIHWPIALHENA 461
E LF K H KE +P L ++ L++D V L +H P +ENA
Sbjct: 697 EHLFPRLKALVVRHCKELRNVPTLPSTVNYLEMDSVGLTTLHEPYVPNENA 747
>04_03_0437 +
15920806-15920811,15921257-15921429,15921515-15921559,
15923662-15923821,15924709-15925047
Length = 240
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 506 RVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVV 685
+++ +G K IG+ + + R + + L+ + + ++ C+ GI +V
Sbjct: 8 KLVEEGKVKYIGLCEASASTIRRAHAVHPINAVQLEWSLWSRDVEEDIIPTCRELGIGIV 67
Query: 686 AYTPFGNLFN 715
AY+P G F+
Sbjct: 68 AYSPLGRGFS 77
>03_03_0265 - 16000085-16000319,16001730-16001854,16004323-16005492
Length = 509
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +2
Query: 431 SLADRSARKRLNFPNRLRGDVASYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVL 610
S+A RS+RKR + P R GD+ +D VL + L + + F ++ + R S +P+ L
Sbjct: 3 SMAARSSRKRRSPPPRGLGDL--HDDVLERVLARLPPATFFRLRAVCRRWSAAAASPTFL 60
Query: 611 Q 613
+
Sbjct: 61 R 61
>06_03_0089 - 16475677-16476309
Length = 210
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 220 SQRRSPIPPTFEPRRLSARYYWCRAKCRCRSPEFPCHCST 101
++R SP P +P R+ A RC+ P P +C+T
Sbjct: 94 TRRNSPATPPPDPEEEEVRHSSRPAAQRCQVPAVPYYCAT 133
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 300 VVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLIHWPI 443
V +R +LF L K EA L +LR SL +D + IH P+
Sbjct: 339 VAERTELFTGADLEGLEGKSEAALRSLRPSLTQSVVDEYSNAAIHGPL 386
>05_03_0103 + 8422250-8422813
Length = 187
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 768 DGTRRWSSARGAGADGWRLNRLPKGV 691
DG RR + A A GWR NR GV
Sbjct: 81 DGNRRSEATNAAAASGWRRNRHYGGV 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,928,992
Number of Sequences: 37544
Number of extensions: 582981
Number of successful extensions: 2334
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2322
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -