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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0141
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660           82   4e-16
06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749     69   4e-12
01_06_0783 + 31975261-31975398,31975583-31975726                       56   2e-08
01_05_0324 - 20946774-20946935,20947301-20947780                       55   6e-08
02_04_0361 - 22359278-22359439,22362291-22362728                       47   1e-05
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504...    32   0.50 
06_01_0125 + 970746-970967,971126-971226,971897-972026,972108-97...    28   6.2  
12_02_0689 + 22160627-22160720,22161331-22161425,22161679-221618...    28   8.2  

>01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660
          Length = 111

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 36/56 (64%), Positives = 43/56 (76%)
 Frame = +2

Query: 86  KAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 253
           K  +K+ADM EEM+Q+A D A  A EK  +EKDIA +IKKEFDK + PTWHCIVGR
Sbjct: 46  KIQLKSADMKEEMRQEAFDIARVAFEKHTMEKDIAEYIKKEFDKNHGPTWHCIVGR 101


>06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749
          Length = 135

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 32/59 (54%), Positives = 40/59 (67%)
 Frame = +2

Query: 74  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 250
           +   K  IK+A+M EEM+Q+A D    A EK  +EKDI  +I KEFDK + PTWHCIVG
Sbjct: 54  LAGHKIQIKSANMKEEMRQEAFDIDRVAFEKHTMEKDIVEYI-KEFDKNHGPTWHCIVG 111


>01_06_0783 + 31975261-31975398,31975583-31975726
          Length = 93

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
 Frame = +2

Query: 74  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIE--KDIAAFIKKEFDKKYNPTWHCIV 247
           M + KA++++ DM  +MQ  A+  A +AL++F++   + IAA IKKEFD  + P W C+V
Sbjct: 1   MLEGKAMVEDTDMPVKMQLQAMSAAYKALDRFDVLDCRSIAAHIKKEFDMIHGPGWQCVV 60

Query: 248 G 250
           G
Sbjct: 61  G 61



 Score = 35.1 bits (77), Expect = 0.054
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 247 GSYFGSYVTHETRHFIYFYLGQVAILLFK 333
           G+ FG Y TH    FIYF LG +  L+FK
Sbjct: 61  GASFGCYFTHSKGSFIYFKLGALRFLVFK 89


>01_05_0324 - 20946774-20946935,20947301-20947780
          Length = 213

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
 Frame = +2

Query: 104 ADMSEEMQQDAVDCATQA---LEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 250
           ADMS  MQ  A  CA ++   L+KF+  + +A  +KKEFDK Y PTWHCIVG
Sbjct: 125 ADMSPFMQLHAFRCAKRSHDSLDKFS-SRQLAHDVKKEFDKVYGPTWHCIVG 175



 Score = 34.3 bits (75), Expect = 0.094
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +1

Query: 247 GSYFGSYVTHETRHFIYFYLGQVAILLFKS 336
           G+ +GS+VTH    F+YF + ++ ++LFK+
Sbjct: 175 GTSYGSFVTHARGCFLYFSMDKIIVMLFKT 204


>02_04_0361 - 22359278-22359439,22362291-22362728
          Length = 199

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = +2

Query: 50  KQKQTQDKMCDRKAVIK--NADMSEEMQQDAVDCATQALEKFNI--EKDIAAFIKKEFDK 217
           K+K+ +    +RK  ++   ADM   MQ+ AV  A  A+        K +A  +KKEFD 
Sbjct: 91  KEKEMEKGKEERKVSVRVRAADMPLAMQRRAVRLAFDAVAAMPRLDSKRLALALKKEFDA 150

Query: 218 KYNPTWHCIVG 250
            Y P WHCIVG
Sbjct: 151 TYGPAWHCIVG 161



 Score = 37.1 bits (82), Expect = 0.013
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = +1

Query: 247 GSYFGSYVTHETRHFIYFYLGQVAILLFKS 336
           G+ FGSYVTH    F+YF + +V +LLF++
Sbjct: 161 GTGFGSYVTHSVGGFLYFSVDKVYVLLFRT 190


>12_01_0612 -
           5044639-5044858,5045010-5045167,5045440-5045684,
           5046006-5046294,5047540-5048561,5049320-5049389
          Length = 667

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 32  EFVHLSKQKQTQDKMCDRKA-VIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKE 208
           EF  L +++  +   CD  +   +N  + EE  Q  +DC  +  E+F+ E+D    IK  
Sbjct: 567 EFERLLQEELARAIECDVDSETTENCKLREEQIQRIIDCQVKDAEEFDAEQD--ELIKTH 624

Query: 209 FDKKYN 226
            +KK N
Sbjct: 625 EEKKAN 630


>06_01_0125 +
           970746-970967,971126-971226,971897-972026,972108-972333,
           972400-972502,972519-972594,972710-973333
          Length = 493

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 53  QKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEK 166
           Q + ++K C  KA +   + S + +QD +D   Q  EK
Sbjct: 259 QHRKRNKFCGHKAAVDRLNESGKNEQDRIDDVVQMYEK 296


>12_02_0689 +
           22160627-22160720,22161331-22161425,22161679-22161822,
           22162256-22162513,22162595-22162666,22162759-22162824,
           22163212-22163346,22163562-22163697,22163807-22163983,
           22164086-22164192,22164281-22164421,22164604-22164740,
           22164823-22165076,22165158-22165300,22165423-22165581,
           22166049-22166461,22167369-22167474
          Length = 878

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +3

Query: 378 RTQYYQMDSL---CRFSCEARAVVHSHR*LAARVWQEEARLVLV*TVSSECESGCTVFTY 548
           R  Y Q+  L    R  C  R  +  HR L++ V   E R + + T +   + GC  F++
Sbjct: 323 RKLYNQIQDLKGNIRVYCRVRPFLPGHRSLSSSVADTEERTITIITPTKYGKDGCKSFSF 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,684,642
Number of Sequences: 37544
Number of extensions: 310752
Number of successful extensions: 670
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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