BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0119 (648 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_1332 + 32718584-32718706,32718892-32718960,32719069-327191... 85 6e-17 10_08_0523 - 18518158-18518442,18518786-18518899,18518994-185192... 82 4e-16 04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562... 31 0.79 03_03_0050 - 14086954-14087079,14087152-14088045 31 0.79 08_02_1241 - 25511462-25511614,25511690-25512499 30 1.8 08_02_0746 + 20721421-20721649,20722912-20722971,20723318-207233... 30 1.8 03_02_0886 - 12173913-12174065,12174140-12174685 30 1.8 01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 30 1.8 09_02_0412 - 8731559-8731651,8731729-8731762,8732250-8732501,873... 29 2.4 07_01_1088 + 9995442-9997736 26 3.7 03_05_0226 - 22115285-22115404,22115477-22116661,22117037-221178... 29 4.2 02_04_0441 + 22960933-22961559 29 4.2 05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583 28 5.6 >04_04_1332 + 32718584-32718706,32718892-32718960,32719069-32719155, 32719865-32719971,32720066-32720187,32720462-32720535, 32720833-32720946,32721100-32721213 Length = 269 Score = 84.6 bits (200), Expect = 6e-17 Identities = 36/70 (51%), Positives = 49/70 (70%) Frame = +2 Query: 257 CQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDN 436 CQ MDM+ PG VPM ++ F E++ IQN+KILQ F K+ + K + ++KLVKGR DN Sbjct: 49 CQLMDMVHPGVVPMHKVNFDAKTEYDMIQNYKILQDVFNKLRLSKNIEVNKLVKGRPLDN 108 Query: 437 FEFLQWFKKF 466 EFLQW K++ Sbjct: 109 LEFLQWLKRY 118 Score = 31.9 bits (69), Expect = 0.45 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = +3 Query: 168 LSRHDMLAWVNDCLQSNFAKIEELCTGA 251 + R ++L+W+N LQ + AK+EE +GA Sbjct: 19 VGRGEILSWINATLQLSLAKVEEAASGA 46 >10_08_0523 - 18518158-18518442,18518786-18518899,18518994-18519219, 18519364-18519470,18519809-18519964,18520100-18520210 Length = 332 Score = 81.8 bits (193), Expect = 4e-16 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 2/93 (2%) Frame = +2 Query: 257 CQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDN 436 CQ MD PG+VPM ++ F E+E IQN+K+LQ F K+ + K + ++KL KGR DN Sbjct: 45 CQLMDAAHPGAVPMHKVNFDAKTEYEMIQNYKVLQDVFNKLKITKHIEVNKLTKGRPLDN 104 Query: 437 FEFLQWFKKFLTPTME--VRAYDAWATRRAAMG 529 EF+QW K++ + +Y+A R ++ G Sbjct: 105 LEFMQWMKRYCDSVNGGFMNSYNASERRESSKG 137 Score = 33.1 bits (72), Expect = 0.20 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = +3 Query: 168 LSRHDMLAWVNDCLQSNFAKIEELCTGA 251 + R+++LAW+N LQ +K+EE +GA Sbjct: 15 VGRNEILAWINTTLQLGLSKVEEAASGA 42 >04_03_0659 - 18453778-18453903,18453976-18454963,18455496-18456229, 18456292-18456360,18456528-18456605,18456703-18456789, 18456881-18456931,18457021-18457092,18457177-18457304, 18458194-18458275,18458705-18458754,18459043-18459096, 18459586-18459675,18459903-18459983,18460443-18460538, 18460960-18461022,18461313-18461402,18461630-18461698, 18462051-18462291 Length = 1082 Score = 31.1 bits (67), Expect = 0.79 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 Query: 239 VYRCXHCQFMDMLFPGSVPMKRIKF 313 VY C HCQ D FP + P+K I+F Sbjct: 1002 VYHCSHCQRTDHTFP-TCPLKHIEF 1025 >03_03_0050 - 14086954-14087079,14087152-14088045 Length = 339 Score = 31.1 bits (67), Expect = 0.79 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 Query: 239 VYRCXHCQFMDMLFPGSVPMKRIKF 313 VY C HCQ D FP + P+K I+F Sbjct: 259 VYHCSHCQRTDHTFP-TCPLKHIEF 282 >08_02_1241 - 25511462-25511614,25511690-25512499 Length = 320 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +2 Query: 230 RRVVYRCXHCQFMDMLFPGSVPMKRIKF 313 ++ +Y C HCQ D FP + P+K ++F Sbjct: 228 QKELYHCSHCQRTDHTFP-TCPLKHVEF 254 >08_02_0746 + 20721421-20721649,20722912-20722971,20723318-20723377, 20723458-20723553,20723764-20723871,20724037-20724090, 20724275-20724414,20724499-20724570,20724642-20724692, 20724943-20725017,20725205-20725585,20726372-20727604, 20727679-20727831 Length = 903 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +2 Query: 230 RRVVYRCXHCQFMDMLFPGSVPMKRIKF 313 ++ +Y C HCQ D FP + P+K ++F Sbjct: 811 QKELYHCSHCQRTDHTFP-TCPLKHVEF 837 >03_02_0886 - 12173913-12174065,12174140-12174685 Length = 232 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +2 Query: 230 RRVVYRCXHCQFMDMLFPGSVPMKRIKF 313 ++ +Y C HCQ D FP + P+K ++F Sbjct: 140 QKELYHCSHCQRTDHTFP-TCPLKHVEF 166 >01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 Length = 218 Score = 29.9 bits (64), Expect = 1.8 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 4/81 (4%) Frame = -3 Query: 529 PHGSPSRRPCVICPHLHSW---RQEFLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL 359 P SP C+I P + +Q E L+KLK +LET + YL L L Sbjct: 111 PALSPIVFECIIFPIMRGVPTNQQVVHESLEKLKKVLETYEARLSGSRYLAGDFLSFADL 170 Query: 358 *YFKVLYIFMFQICLK-FDSF 299 +F + FM C FD++ Sbjct: 171 NHFPFTFYFMATPCASLFDAY 191 >09_02_0412 - 8731559-8731651,8731729-8731762,8732250-8732501, 8732585-8733996 Length = 596 Score = 29.5 bits (63), Expect = 2.4 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = -3 Query: 283 REQHVHELAMAAPVHNS---SIFAKFDWRQSFTHASISCRDRFSD 158 RE+ V A++ P H + +K W++ F H R+ F D Sbjct: 36 REKDVLSTALSTPEHRGRVRGVSSKMSWKEGFKHDPYKTRETFKD 80 >07_01_1088 + 9995442-9997736 Length = 764 Score = 25.8 bits (54), Expect(2) = 3.7 Identities = 19/66 (28%), Positives = 31/66 (46%) Frame = -3 Query: 271 VHELAMAAPVHNSSIFAKFDWRQSFTHASISCRDRFSDVTFVEYTFTAIFTMYQPLMKKF 92 + ELAM P +F + + R+S+ D+ VT+ TA+ Y P +K F Sbjct: 312 IRELAMFLPFTAIGLFHQSN-RKSYN-------DKDVKVTYALLCCTAVIEFYNPFVKVF 363 Query: 91 LTVNLS 74 +V L+ Sbjct: 364 TSVTLN 369 Score = 21.4 bits (43), Expect(2) = 3.7 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -3 Query: 430 LETTLHQFVNGYYLVHTHLFKTSL*YF 350 LET LH FV Y ++ LF + +F Sbjct: 282 LETGLHHFVELYKQLNYTLFSSLSEFF 308 >03_05_0226 - 22115285-22115404,22115477-22116661,22117037-22117861, 22118029-22118106,22118370-22118420,22118510-22118581, 22118666-22118667,22119453-22119557,22119668-22119749, 22120178-22120227,22120514-22120567,22121084-22121164, 22121567-22121656,22121884-22121964,22122304-22122544 Length = 1038 Score = 28.7 bits (61), Expect = 4.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 239 VYRCXHCQFMDMLFPGSVPMKRIKF 313 VY C +CQ D FP + P+K I+F Sbjct: 960 VYHCSYCQRTDHTFP-TCPLKHIEF 983 >02_04_0441 + 22960933-22961559 Length = 208 Score = 28.7 bits (61), Expect = 4.2 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -3 Query: 541 RAPVPHGSPSRRPCVICPHLHSWRQEFLEP 452 RAPV +R P V P LHSWR P Sbjct: 33 RAPVATPPAARAPPVGAPPLHSWRHPITLP 62 >05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583 Length = 602 Score = 28.3 bits (60), Expect = 5.6 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -3 Query: 619 MVWGSSCELGRPGXTVFXXXXXXXXGRAPVPHGSPSRRPC 500 +VWG++C +G TV GR P P S + PC Sbjct: 539 LVWGATCAVGTALCTVLYARSRGFAGRLPPPARS-TTMPC 577 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,814,841 Number of Sequences: 37544 Number of extensions: 380311 Number of successful extensions: 911 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 885 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 911 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1608522592 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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