BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0239.Seq (811 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 48 7e-06 08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 47 2e-05 06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 47 2e-05 02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 44 1e-04 05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 41 0.001 01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 40 0.003 09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 37 0.017 12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 3.3 09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 29 3.3 03_06_0729 - 35771936-35772050,35772469-35772995 29 3.3 10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 29 5.8 04_03_0920 + 20826876-20829293 29 5.8 >09_04_0008 + 13651997-13652072,13652440-13652541,13653138-13653142, 13653970-13654188,13654686-13654901,13654989-13655078, 13656307-13656507 Length = 302 Score = 48.4 bits (110), Expect = 7e-06 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 3/91 (3%) Frame = +2 Query: 257 KDLISELKSELTGNLENVIVALMTPLPH---FYAKELHDAVSGIGTDEEAIIEILCTLSN 427 + L +KSE +GN E ++ ++ + ++AK L ++ G+GTD+ +I ++ T + Sbjct: 202 RSLEKVVKSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTE 261 Query: 428 YGIRTISAFYEQLYGKSLESDLKGDTSDTSR 520 ++ I A Y + Y KSL + +TS R Sbjct: 262 IDMQYIKAEYYKKYKKSLAEAIHSETSGNYR 292 Score = 35.5 bits (78), Expect = 0.050 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = +2 Query: 347 AKELHDA-VSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTS 508 AK+L+ A +GTDE+ I I S + ++++ Y +Y +SLE +K +TS Sbjct: 159 AKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETS 213 >08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 Length = 346 Score = 47.2 bits (107), Expect = 2e-05 Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 4/86 (4%) Frame = +2 Query: 275 LKSELTGN----LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRT 442 +KSE +GN L ++ +P +F AK LH+A+ G+GT++ +I ++ T + ++ Sbjct: 251 VKSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309 Query: 443 ISAFYEQLYGKSLESDLKGDTSDTSR 520 I A Y + Y +SL + +TS R Sbjct: 310 IKAEYHRSYKRSLADAVHSETSGNYR 335 Score = 33.1 bits (72), Expect = 0.27 Identities = 20/84 (23%), Positives = 40/84 (47%) Frame = +2 Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 436 +DL+ L +EL+G+ + ++ + A LH A++G TD A E++C+ + + Sbjct: 59 QDLLHRLAAELSGHHKRAVLLWVLDPASRDAAVLHQALNGDVTDMRAATEVVCSRTPSQL 118 Query: 437 RTISAFYEQLYGKSLESDLKGDTS 508 + Y +G L+ D + Sbjct: 119 LVVRQAYLARFGGGGGGGLEHDVA 142 Score = 29.9 bits (64), Expect = 2.5 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +2 Query: 347 AKELHDAVSG-IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 484 A+EL+ A +GTDE I + S + ++A Y +Y +SLE Sbjct: 177 ARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLE 223 >06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310, 6262910-6263122,6264007-6264300 Length = 317 Score = 47.2 bits (107), Expect = 2e-05 Identities = 25/84 (29%), Positives = 44/84 (52%) Frame = +2 Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 436 KDL ++ K E L +I P ++ K + A++G+GTDE ++ I+ T + + Sbjct: 220 KDLKADPKDEFLSTLRAIIRCFCCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDL 278 Query: 437 RTISAFYEQLYGKSLESDLKGDTS 508 + I+ Y++ LE + GDTS Sbjct: 279 KLITEAYQKRNSVPLERAVAGDTS 302 Score = 36.3 bits (80), Expect = 0.029 Identities = 21/62 (33%), Positives = 27/62 (43%) Frame = +2 Query: 326 TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 505 T L H AK LH+ + ++ II IL T S + Y YG + DLK D Sbjct: 167 TKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADP 226 Query: 506 SD 511 D Sbjct: 227 KD 228 Score = 32.7 bits (71), Expect = 0.36 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +3 Query: 141 LRKAMKGFGTDEKAIIDVLCRXGIVQRLEIAETFKTNY 254 LRKA +G+GT+E II +L QR I + Y Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTY 57 >02_05_0782 - 31716860-31717150,31717400-31717612,31718497-31718642, 31718742-31718817 Length = 241 Score = 44.4 bits (100), Expect = 1e-04 Identities = 25/91 (27%), Positives = 44/91 (48%) Frame = +2 Query: 251 LCKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNY 430 + KDL ++ K E G L +I P ++ K + A+ G+GTDE ++ I+ T + Sbjct: 143 ITKDLKADPKDEFLGTLRAIIRCFTCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEV 201 Query: 431 GIRTISAFYEQLYGKSLESDLKGDTSDTSRD 523 ++ I Y++ LE + DT+ D Sbjct: 202 DLKLIKEAYQKRNSVPLERAVAKDTTRDYED 232 Score = 35.9 bits (79), Expect = 0.038 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +3 Query: 141 LRKAMKGFGTDEKAIIDVLCRXGIVQRLEIAETFKTNY 254 LRKA KG+GT+EK II +L QR I + Y Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAY 57 Score = 29.1 bits (62), Expect = 4.4 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +2 Query: 350 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 481 ++L A G GT+E+ II IL R I Y + YG+ L Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEEL 61 >05_04_0139 + 18355597-18355696,18356665-18356778,18357118-18357263, 18357365-18357910,18358397-18358600 Length = 369 Score = 41.1 bits (92), Expect = 0.001 Identities = 20/75 (26%), Positives = 41/75 (54%) Frame = +2 Query: 284 ELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQ 463 +L L+ + L +P HF A+ + ++ G+GTDEE + + + + + + Y+ Sbjct: 281 QLAAVLKAALWCLTSPEKHF-AEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKV 339 Query: 464 LYGKSLESDLKGDTS 508 Y ++ +D++GDTS Sbjct: 340 RYNTTVTADVRGDTS 354 Score = 39.9 bits (89), Expect = 0.002 Identities = 18/42 (42%), Positives = 28/42 (66%) Frame = +3 Query: 138 TLRKAMKGFGTDEKAIIDVLCRXGIVQRLEIAETFKTNYART 263 ++RKA++G+GTDE A+I++L QR EIA ++ Y T Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106 Score = 37.9 bits (84), Expect = 0.009 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Frame = +2 Query: 299 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 478 + ++ V P P A+ + AV G GTDE A+IEIL + I+ YE LY ++ Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106 Query: 479 ----LESDLKGD 502 L S+L GD Sbjct: 107 LLDRLHSELSGD 118 Score = 29.9 bits (64), Expect = 2.5 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Frame = +2 Query: 347 AKELHDAVSGIG--TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSD 511 A ELHDAV G G + ++ I+ T S + Y Q +GK ++ L G D Sbjct: 224 AAELHDAVVGRGQALHGDDVVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGD 280 >01_05_0009 - 17101633-17101836,17101948-17102040,17102122-17102334, 17102514-17102651,17102764-17102909,17106264-17106339 Length = 289 Score = 39.5 bits (88), Expect = 0.003 Identities = 18/38 (47%), Positives = 25/38 (65%) Frame = +3 Query: 141 LRKAMKGFGTDEKAIIDVLCRXGIVQRLEIAETFKTNY 254 L KA +G+GTDE+A+I VL QR +I T++ NY Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENY 57 Score = 37.9 bits (84), Expect = 0.009 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Frame = +2 Query: 299 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 478 + ++V +TP P A L A G GTDE+A+I +L + I YE+ Y ++ Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60 Query: 479 ----LESDLKGD 502 L+S+L GD Sbjct: 61 LIQRLQSELSGD 72 Score = 31.5 bits (68), Expect = 0.82 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = +2 Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 427 ++LI L+SEL+G+LE + + A ++ A I D I+EI CT S+ Sbjct: 59 ENLIQRLQSELSGDLERAMYHWVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSS 115 >09_03_0079 + 12142390-12142459,12142792-12143006,12143050-12143268, 12143345-12143932 Length = 363 Score = 37.1 bits (82), Expect = 0.017 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Frame = +2 Query: 263 LISELKSELTGNLENVIVALMTPLPHFYAKEL-HDAVSGIGTDEEAIIEILCTLSNYGIR 439 L+S+ S L+G++ + L P ++ DA+ G D + ++E++CT + + Sbjct: 81 LVSKHISILSGSIAIRVACLRASEPCVRDADIARDALFGRRIDGDVLVEVVCTRPSGEVA 140 Query: 440 TISAFYEQLYGKSLESDLKGDTS 508 I Y+ Y SLE D+ TS Sbjct: 141 LIRQAYQARYSASLERDVSSRTS 163 Score = 37.1 bits (82), Expect = 0.017 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = +2 Query: 347 AKELHDAV--SGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSDTS 517 AK L++AV S D+ +++++L S +R + A Y +LYG+ L LK DTS Sbjct: 195 AKTLYEAVEISAARVDQRSVLQLLRHRSGDQLRAVLASYRRLYGQELARALKRKDGDTS 253 >12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399, 3673400-3673448,3674291-3674378,3674477-3674573, 3675195-3675278,3675377-3675464,3676589-3676715, 3676774-3676848,3676934-3677042,3677125-3677448, 3677863-3678039 Length = 623 Score = 29.5 bits (63), Expect = 3.3 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Frame = +2 Query: 266 ISELKSELTGNLENVIVALMTPLPHFY---AKELHDAVSGIGTDEEAIIEILCTLSNYGI 436 IS+L S+ ++++ + PL H + AKE HD + G+G+ + + + L + G Sbjct: 159 ISDLNSQDKDPIKSIHFSNSNPLCHAFDPEAKEGHDLIIGMGSGDVYSMSLRQQLQDSGR 218 Query: 437 RTISAFYEQLYGKSLESD 490 + ++A Q Y K + D Sbjct: 219 KPVAA---QHYNKGVRYD 233 >09_04_0202 - 15544498-15545037,15546043-15546449,15546874-15546977, 15547580-15547788,15548092-15549428,15551680-15551941 Length = 952 Score = 29.5 bits (63), Expect = 3.3 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 2/90 (2%) Frame = +2 Query: 293 GNLENV-IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL- 466 GN V +++ P Y+ L V D + I C + YG R + YE Sbjct: 116 GNRSQVPVISFTATSPSLYSASLPYFVRATLNDSAQVQSIACLIKTYGWREVVPIYEDTD 175 Query: 467 YGKSLESDLKGDTSDTSRDCACRCAWPIAM 556 YG+ + L D R P+++ Sbjct: 176 YGRGIIPYLVDALQDIDARVPYRSVIPLSV 205 >03_06_0729 - 35771936-35772050,35772469-35772995 Length = 213 Score = 29.5 bits (63), Expect = 3.3 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 542 WPIAMKTRASXKAQLKPMLKHWPPLVKVNWER 637 W + + T AS KA +K M KH L NW R Sbjct: 162 WKLHVLTAASAKAAIKLMSKHIDALTGDNWTR 193 >10_08_1005 - 22179407-22180122,22180210-22180653,22180737-22180861, 22180939-22181169,22181250-22181805,22181896-22182312, 22182405-22183216,22183653-22183738,22184464-22184534, 22184553-22185573,22186018-22186062,22186252-22186326, 22186797-22186871 Length = 1557 Score = 28.7 bits (61), Expect = 5.8 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +2 Query: 455 YEQLYGKSLESDLKGDTSDTSRDC 526 YE+ YGK LE+ L GD S T+ C Sbjct: 1131 YERAYGKLLENMLAGDLSLTANIC 1154 >04_03_0920 + 20826876-20829293 Length = 805 Score = 28.7 bits (61), Expect = 5.8 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = +2 Query: 332 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGD 502 LPH A+ + A SG + + CT +YG S ++++LY SD D Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSD 421 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,737,537 Number of Sequences: 37544 Number of extensions: 358505 Number of successful extensions: 985 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 944 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 985 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2209429392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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