BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0237.Seq (907 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_1016 + 33830751-33831387,33831470-33831527,33831620-338317... 64 2e-10 04_04_0409 + 24992944-24993421,24993920-24994000,24994400-249946... 61 1e-09 06_03_0942 - 26185898-26185932,26186004-26186379,26186473-261866... 59 5e-09 08_02_1078 + 24179558-24179936,24180577-24180634,24180721-241808... 58 7e-09 09_04_0146 - 15080906-15081322,15081556-15081697,15081804-150818... 57 2e-08 05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 32 0.55 03_02_0977 - 12842948-12843572,12844326-12844741 31 1.3 02_01_0002 - 9542-9762,11085-11196,11328-12575 31 1.3 01_01_0120 + 1119319-1119447,1120565-1120632,1121682-1121928,112... 31 1.3 02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 30 2.9 01_06_1332 - 36379736-36379909,36380395-36380459,36380534-363806... 29 6.7 07_01_0446 - 3371829-3372132,3374691-3375673 28 8.9 >01_06_1016 + 33830751-33831387,33831470-33831527,33831620-33831703, 33831819-33831954,33833191-33833451 Length = 391 Score = 63.7 bits (148), Expect = 2e-10 Identities = 26/46 (56%), Positives = 36/46 (78%) Frame = +1 Query: 25 EIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 162 +IP TS S+++SK + +RGF+FVG T+ +SFMQA GL NDH+V C Sbjct: 335 KIPVKTSKSESISKDMVRRGFRFVGPTVIHSFMQAVGLTNDHLVSC 380 >04_04_0409 + 24992944-24993421,24993920-24994000,24994400-24994622, 24994709-24994850,24995166-24995555 Length = 437 Score = 60.9 bits (141), Expect = 1e-09 Identities = 23/46 (50%), Positives = 34/46 (73%) Frame = +1 Query: 25 EIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 162 ++P TS +DA+SK L +RGF+ VG T+ Y+FMQ G+ NDH++ C Sbjct: 338 QVPVKTSKADAISKDLVRRGFRSVGPTVVYTFMQVSGMTNDHLISC 383 >06_03_0942 - 26185898-26185932,26186004-26186379,26186473-26186614, 26186694-26186820,26186870-26186927,26187520-26187551, 26187848-26188454 Length = 458 Score = 58.8 bits (136), Expect = 5e-09 Identities = 24/46 (52%), Positives = 33/46 (71%) Frame = +1 Query: 25 EIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 162 ++P + +D +SK + +RGF+ VG TI YSFMQA GL NDH+V C Sbjct: 352 QVPVKSPKADMISKDMVRRGFRGVGPTIIYSFMQAAGLTNDHLVSC 397 >08_02_1078 + 24179558-24179936,24180577-24180634,24180721-24180804, 24180908-24181010,24181359-24181649 Length = 304 Score = 58.4 bits (135), Expect = 7e-09 Identities = 27/49 (55%), Positives = 34/49 (69%) Frame = +1 Query: 28 IPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGCCCYP 174 IP T S+A+SK L +RGF+ VG I YSFMQA G+V DH+V C +P Sbjct: 239 IPFRTPKSEAVSKDLVRRGFRLVGPVIVYSFMQASGIVIDHLVDCFRFP 287 >09_04_0146 - 15080906-15081322,15081556-15081697,15081804-15081887, 15081982-15082039,15084038-15084572 Length = 411 Score = 57.2 bits (132), Expect = 2e-08 Identities = 24/46 (52%), Positives = 33/46 (71%) Frame = +1 Query: 25 EIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 162 E+P T +DA+S+ L +RGF VG T+ Y+FMQA G+ NDH+V C Sbjct: 303 EVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQAVGMANDHLVTC 348 >05_05_0230 - 23476919-23477372,23477656-23477695,23478578-23478700, 23479114-23479151,23479289-23479674,23479875-23481053, 23481805-23481928,23482733-23482779 Length = 796 Score = 32.3 bits (70), Expect = 0.55 Identities = 22/85 (25%), Positives = 40/85 (47%) Frame = -2 Query: 537 PVPGKNLSPVIFLINLQHQVGMALLHILHQRLTNTALTAFGATNIAARNRPSIMLTKPRS 358 PVP ++ +PV + + + Q +T+ +A T A +RPS ++ R+ Sbjct: 132 PVPARSSTPVKTRPSTPTKTRPSTPVRTRQTANSTSDSAAARTTSAQNSRPSTPTSRSRA 191 Query: 357 LPSSSQTQFCALAR*ASRTSGMQSR 283 +P+SS A++R + T SR Sbjct: 192 MPNSSSGAIPAMSRPGASTISATSR 216 >03_02_0977 - 12842948-12843572,12844326-12844741 Length = 346 Score = 31.1 bits (67), Expect = 1.3 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -1 Query: 574 VSSCHAQSTM*KPCAW*KFIAGDFFDKPPASGGDGAAAHTASAPY 440 VSSC+A P AW + + F GG G A +A+AP+ Sbjct: 17 VSSCNAGDHPACPAAWSAAVGAELFHGGVGGGGGGEAQCSAAAPH 61 >02_01_0002 - 9542-9762,11085-11196,11328-12575 Length = 526 Score = 31.1 bits (67), Expect = 1.3 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -1 Query: 424 GLRCDKHRCQKSAFHNADKTEKLTVFFPDPVLRVGKIGIPHQRNAVTP 281 GLR KH+ ++S+ + ++L FPD V+ + + Q A P Sbjct: 59 GLRLKKHQRKRSSMRHPLSRQRLAARFPDKVVATNQTDVARQTEADAP 106 >01_01_0120 + 1119319-1119447,1120565-1120632,1121682-1121928, 1122430-1122498,1122782-1122907,1123326-1123406, 1123484-1123561,1124084-1124319,1124399-1124545, 1124864-1125152,1125231-1125352,1125713-1125749 Length = 542 Score = 31.1 bits (67), Expect = 1.3 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -2 Query: 699 SRLGNGCAGNTALAWLEKYNGPELTL 622 S LG+GC A AW+E+++G +L++ Sbjct: 126 STLGSGCCAAMAHAWMEEFSGDKLSI 151 >02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 Length = 379 Score = 29.9 bits (64), Expect = 2.9 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -1 Query: 520 FIAGDFFDKPPASGGDGAAAHTASAPYQYRPDGLRCDKHRC 398 F+AG + +P ASG AA S P RP+ + + RC Sbjct: 282 FLAGWYASRPLASGAGAAALRMCSQPTCGRPETRKHEFRRC 322 >01_06_1332 - 36379736-36379909,36380395-36380459,36380534-36380612, 36380794-36380868,36381106-36381609,36382046-36382246, 36383033-36383566 Length = 543 Score = 28.7 bits (61), Expect = 6.7 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +1 Query: 424 RQGGIGKALMQYVQQRHPHLMLEVYQKNH 510 +Q G+ + + QQ+HPHL ++ Q+ H Sbjct: 319 QQSGLNQHQIAQTQQQHPHLNTQLLQQQH 347 >07_01_0446 - 3371829-3372132,3374691-3375673 Length = 428 Score = 28.3 bits (60), Expect = 8.9 Identities = 10/29 (34%), Positives = 14/29 (48%) Frame = +3 Query: 477 PPDAGGLSKKSPAINFYQAQGFHIVDCAW 563 P GG +K P + ++ GF I C W Sbjct: 71 PAATGGAEEKLPVVVYFHGGGFCIGSCTW 99 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 29,444,480 Number of Sequences: 37544 Number of extensions: 750075 Number of successful extensions: 2344 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2186 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2343 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2565528060 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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