BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0215.Seq (900 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688 38 0.011 01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 36 0.033 07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509... 33 0.41 06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 32 0.54 05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 31 0.94 01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251 31 0.94 01_01_0147 - 1332752-1333447,1333557-1333739 31 0.94 04_04_1161 + 31374240-31374403,31374495-31374812,31375347-313754... 31 1.2 05_01_0379 + 2975701-2976831 31 1.6 09_04_0107 - 14640097-14640348,14640472-14640701,14640805-146412... 30 2.2 11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 30 2.9 06_02_0097 + 11710560-11710859,11712605-11713270 29 3.8 10_01_0034 - 414654-415649,416654-417007 29 6.7 05_01_0380 + 2978256-2979284 29 6.7 02_01_0284 + 1907249-1907665,1907816-1907859,1909508-1909546,190... 29 6.7 01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225... 29 6.7 07_03_0265 + 15976331-15976645,15977575-15977784,15977869-159779... 28 8.8 06_03_0485 + 21330547-21330684,21331391-21331471,21331610-213316... 28 8.8 >02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688 Length = 308 Score = 37.9 bits (84), Expect = 0.011 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +1 Query: 124 SEIVENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGR*K 258 + +V ++ L L++LL+CPVC I QC GH +C K Sbjct: 41 TSLVTVELSSLTGLNDLLECPVCTNSMRPPILQCPNGHTICSNCK 85 >01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 Length = 417 Score = 36.3 bits (80), Expect = 0.033 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +1 Query: 172 LLQCPVCYEIPTGHIFQCNEGHNVC 246 +L CPVC++I +FQC+ GH VC Sbjct: 36 VLHCPVCFQILRPPVFQCDLGHLVC 60 >07_03_1564 + 27749899-27750166,27750431-27750507,27750923-27750950, 27751117-27751261,27751351-27751429,27751515-27751633, 27751732-27752073,27754807-27754896,27755730-27755955, 27756398-27756784,27757176-27757496 Length = 693 Score = 32.7 bits (71), Expect = 0.41 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 172 LLQCPVCYEIPTGHIFQCNEGHNVC 246 LL+CPVC I QC+ GH +C Sbjct: 442 LLECPVCLNAMYPPIHQCSNGHTLC 466 >06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 Length = 640 Score = 32.3 bits (70), Expect = 0.54 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +3 Query: 393 ASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKD 512 +S SSS+ A D G DN E +D +ND S + N KD Sbjct: 469 SSSSSSSLAMDRGEDNHELPRQDHHNDMATSSESVNQLKD 508 >05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 Length = 361 Score = 31.5 bits (68), Expect = 0.94 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 172 LLQCPVCYEIPTGHIFQCNEGHNVC 246 LL+CPVC I QC GH +C Sbjct: 97 LLECPVCTNSMFPPIHQCQNGHTLC 121 >01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251 Length = 347 Score = 31.5 bits (68), Expect = 0.94 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 172 LLQCPVCYEIPTGHIFQCNEGHNVC 246 LL+CPVC I QC GH +C Sbjct: 83 LLECPVCTNSMYPPIHQCQNGHTLC 107 >01_01_0147 - 1332752-1333447,1333557-1333739 Length = 292 Score = 31.5 bits (68), Expect = 0.94 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +1 Query: 175 LQCPVCYEIPTGHIFQCNEGHNVCG 249 L+CP+C+ ++ C GH CG Sbjct: 46 LECPICFVPFEDRVYMCKNGHAACG 70 >04_04_1161 + 31374240-31374403,31374495-31374812,31375347-31375493, 31375674-31375754,31375799-31375886,31375999-31376176, 31376705-31376794,31376795-31376866,31377247-31377257 Length = 382 Score = 31.1 bits (67), Expect = 1.2 Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = +1 Query: 52 RILLSI-HSG*IDFFINQPTLFYIMSEIVENKVDELPDLDNLLQCP 186 RILL+I H I F+N + Y +EI+++ + ++P+ ++LL+ P Sbjct: 149 RILLTILHCHPIRAFLNWHLVRYKAAEIIKDLIPQIPEFNDLLKLP 194 >05_01_0379 + 2975701-2976831 Length = 376 Score = 30.7 bits (66), Expect = 1.6 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 Query: 175 LQCPVCYEIPTGHIFQCNEGHNVC 246 L+C VC+ + IFQC GH VC Sbjct: 123 LECGVCFLLLRPPIFQCEVGHVVC 146 >09_04_0107 - 14640097-14640348,14640472-14640701,14640805-14641215, 14641481-14643831,14643927-14644093 Length = 1136 Score = 30.3 bits (65), Expect = 2.2 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +3 Query: 366 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDE 464 GGK T + AS SSS+P D+ S++ L E Sbjct: 488 GGKKTTAMAASSSSSSPVHDAESEDENSLDHSE 520 >11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752, 1710838-1710909,1711631-1711699,1711807-1711848, 1711946-1712014,1712130-1712267,1712390-1712500, 1712576-1712726,1713720-1713775,1714076-1714753 Length = 540 Score = 29.9 bits (64), Expect = 2.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 366 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQN 482 GG +G + + DS S++ EYL EDE +D+++ Sbjct: 186 GGGAKQGKKKKKTENWMEEDSDSEDEEYLDEDEEDDDEH 224 >06_02_0097 + 11710560-11710859,11712605-11713270 Length = 321 Score = 29.5 bits (63), Expect = 3.8 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = +1 Query: 169 NLLQCPVCYEIPTGHIFQCNEGHNVC 246 ++L C +C+E ++QC GH C Sbjct: 83 DVLDCSICFESLRPPLYQCQNGHVAC 108 >10_01_0034 - 414654-415649,416654-417007 Length = 449 Score = 28.7 bits (61), Expect = 6.7 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 500 PM*GLFRCLCCKNGNSIRLPAAR 568 P+ FRC CC N +S +P AR Sbjct: 12 PLLEFFRCRCCHNSSSRAVPPAR 34 >05_01_0380 + 2978256-2979284 Length = 342 Score = 28.7 bits (61), Expect = 6.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +1 Query: 175 LQCPVCYEIPTGHIFQCNEGHNVC 246 L+C VC+ IFQC GH VC Sbjct: 73 LECGVCFLPLRPPIFQCEVGHVVC 96 >02_01_0284 + 1907249-1907665,1907816-1907859,1909508-1909546, 1909791-1910112,1910803-1910892,1911541-1911609, 1911969-1912074,1912146-1912234,1912349-1912461, 1912555-1912657 Length = 463 Score = 28.7 bits (61), Expect = 6.7 Identities = 17/64 (26%), Positives = 28/64 (43%) Frame = +3 Query: 297 FGTRNYAMEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDN 476 F T Y + + R+F + G +SDS+S+P+ + SD E G+ N N Sbjct: 208 FTTMAYPVSPIAGRRSNWRSFAASLNLEDGPASSDSTSSPSEQT-SDGGEVYGDPSENLN 266 Query: 477 QNSV 488 + Sbjct: 267 SRKL 270 >01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615, 2250707-2250955,2251047-2251176,2251473-2251564, 2251735-2251855,2251940-2252028,2252149-2252271, 2252379-2252506,2253039-2253147,2253701-2254000 Length = 607 Score = 28.7 bits (61), Expect = 6.7 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +3 Query: 402 SSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKDFF--VASAARMG 542 SSS+ + D G ++AE G E +D+ P+ ++ VA+AAR G Sbjct: 38 SSSSSSSDEGEEDAEEEGSGEVDDDDGEAAEPSGKEEEVSPVAAAARSG 86 >07_03_0265 + 15976331-15976645,15977575-15977784,15977869-15977916, 15978307-15978675,15978736-15978747,15978763-15978870, 15979156-15979493,15980313-15980430,15983247-15984107, 15984457-15984750 Length = 890 Score = 28.3 bits (60), Expect = 8.8 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +3 Query: 318 MEELIANVRKLRAFKLGGKVTRGLLASDSSSTPAR 422 +EE+ NV RAF LG KV + LLA S A+ Sbjct: 852 LEEVKINVDCTRAFSLGSKVLKKLLALPRVSDKAK 886 >06_03_0485 + 21330547-21330684,21331391-21331471,21331610-21331683, 21331767-21331842,21332014-21332081,21332803-21332926, 21333264-21333362,21333679-21333815,21334166-21334247, 21334595-21334657,21335272-21335319,21335452-21335514, 21335840-21335923,21336098-21336118 Length = 385 Score = 28.3 bits (60), Expect = 8.8 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -3 Query: 247 HIHYDLHCIGKYDL*GF-HNI-LDTE-VSYPSLAIRQPYFQLSPTLC 116 H +YD+ + K G H+I +D E + +P+ R YF L+PTLC Sbjct: 173 HTNYDIRMLSKSIEKGVTHDISIDPENIKWPTFK-RLSYFMLAPTLC 218 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,473,674 Number of Sequences: 37544 Number of extensions: 512155 Number of successful extensions: 1306 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1255 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1304 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2542098580 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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