BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0214.Seq (886 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688 39 0.006 01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 36 0.033 07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509... 33 0.23 05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 33 0.40 01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251 33 0.40 06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 32 0.53 01_01_0147 - 1332752-1333447,1333557-1333739 31 0.93 05_01_0379 + 2975701-2976831 31 1.6 09_04_0107 - 14640097-14640348,14640472-14640701,14640805-146412... 30 2.1 11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 30 2.8 01_01_0658 - 5017219-5018066,5018572-5019085 30 2.8 06_02_0097 + 11710560-11710859,11712605-11713270 29 3.8 01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 29 5.0 05_01_0380 + 2978256-2979284 29 6.6 02_01_0284 + 1907249-1907665,1907816-1907859,1909508-1909546,190... 29 6.6 11_06_0141 + 20559828-20559986,20560074-20560281,20560375-205604... 28 8.7 07_03_0265 + 15976331-15976645,15977575-15977784,15977869-159779... 28 8.7 02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 28 8.7 01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 28 8.7 >02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688 Length = 308 Score = 38.7 bits (86), Expect = 0.006 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 131 IVENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259 +V ++ L L++LL+CPVC I QC GH +C K Sbjct: 43 LVTVELSSLTGLNDLLECPVCTNSMRPPILQCPNGHTICSNCK 85 >01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 Length = 417 Score = 36.3 bits (80), Expect = 0.033 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +2 Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVC 247 +L CPVC++I +FQC+ GH VC Sbjct: 36 VLHCPVCFQILRPPVFQCDLGHLVC 60 >07_03_1564 + 27749899-27750166,27750431-27750507,27750923-27750950, 27751117-27751261,27751351-27751429,27751515-27751633, 27751732-27752073,27754807-27754896,27755730-27755955, 27756398-27756784,27757176-27757496 Length = 693 Score = 33.5 bits (73), Expect = 0.23 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259 LL+CPVC I QC+ GH +C K Sbjct: 442 LLECPVCLNAMYPPIHQCSNGHTLCSGCK 470 >05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 Length = 361 Score = 32.7 bits (71), Expect = 0.40 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +2 Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259 LL+CPVC I QC GH +C K Sbjct: 97 LLECPVCTNSMFPPIHQCQNGHTLCSTCK 125 >01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251 Length = 347 Score = 32.7 bits (71), Expect = 0.40 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +2 Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259 LL+CPVC I QC GH +C K Sbjct: 83 LLECPVCTNSMYPPIHQCQNGHTLCSTCK 111 >06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 Length = 640 Score = 32.3 bits (70), Expect = 0.53 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +1 Query: 394 ASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKD 513 +S SSS+ A D G DN E +D +ND S + N KD Sbjct: 469 SSSSSSSLAMDRGEDNHELPRQDHHNDMATSSESVNQLKD 508 >01_01_0147 - 1332752-1333447,1333557-1333739 Length = 292 Score = 31.5 bits (68), Expect = 0.93 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +2 Query: 176 LQCPVCYEIPTGHIFQCNEGHNVCG 250 L+CP+C+ ++ C GH CG Sbjct: 46 LECPICFVPFEDRVYMCKNGHAACG 70 >05_01_0379 + 2975701-2976831 Length = 376 Score = 30.7 bits (66), Expect = 1.6 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 176 LQCPVCYEIPTGHIFQCNEGHNVC 247 L+C VC+ + IFQC GH VC Sbjct: 123 LECGVCFLLLRPPIFQCEVGHVVC 146 >09_04_0107 - 14640097-14640348,14640472-14640701,14640805-14641215, 14641481-14643831,14643927-14644093 Length = 1136 Score = 30.3 bits (65), Expect = 2.1 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +1 Query: 367 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDE 465 GGK T + AS SSS+P D+ S++ L E Sbjct: 488 GGKKTTAMAASSSSSSPVHDAESEDENSLDHSE 520 >11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752, 1710838-1710909,1711631-1711699,1711807-1711848, 1711946-1712014,1712130-1712267,1712390-1712500, 1712576-1712726,1713720-1713775,1714076-1714753 Length = 540 Score = 29.9 bits (64), Expect = 2.8 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +1 Query: 367 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQN 483 GG +G + + DS S++ EYL EDE +D+++ Sbjct: 186 GGGAKQGKKKKKTENWMEEDSDSEDEEYLDEDEEDDDEH 224 >01_01_0658 - 5017219-5018066,5018572-5019085 Length = 453 Score = 29.9 bits (64), Expect = 2.8 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -2 Query: 681 FPKSWWRSAHALKVFNAFCSSL*K 610 +P+S WR A AL V + FC SL K Sbjct: 154 WPQSCWRKAEALPVISHFCHSLLK 177 >06_02_0097 + 11710560-11710859,11712605-11713270 Length = 321 Score = 29.5 bits (63), Expect = 3.8 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = +2 Query: 170 NLLQCPVCYEIPTGHIFQCNEGHNVC 247 ++L C +C+E ++QC GH C Sbjct: 83 DVLDCSICFESLRPPLYQCQNGHVAC 108 >01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283, 8561377-8561642,8561967-8562111,8562411-8562530, 8562611-8562930,8564161-8564341,8564434-8564580, 8565186-8565497,8566303-8566450,8566592-8566765, 8567385-8567446,8567499-8567571,8567628-8567683, 8568370-8568645,8569541-8569588,8569870-8569991, 8570258-8570413,8571037-8571079,8572624-8572701, 8572972-8573070,8573168-8573209,8573302-8573304 Length = 1264 Score = 29.1 bits (62), Expect = 5.0 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%) Frame = +1 Query: 493 APNP-CKDFFVASGCKNGNS 549 AP P CK F GC+NGNS Sbjct: 1008 APRPICKFFLTLQGCRNGNS 1027 >05_01_0380 + 2978256-2979284 Length = 342 Score = 28.7 bits (61), Expect = 6.6 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 Query: 176 LQCPVCYEIPTGHIFQCNEGHNVC 247 L+C VC+ IFQC GH VC Sbjct: 73 LECGVCFLPLRPPIFQCEVGHVVC 96 >02_01_0284 + 1907249-1907665,1907816-1907859,1909508-1909546, 1909791-1910112,1910803-1910892,1911541-1911609, 1911969-1912074,1912146-1912234,1912349-1912461, 1912555-1912657 Length = 463 Score = 28.7 bits (61), Expect = 6.6 Identities = 17/64 (26%), Positives = 28/64 (43%) Frame = +1 Query: 298 FGTRNYAMEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDN 477 F T Y + + R+F + G +SDS+S+P+ + SD E G+ N N Sbjct: 208 FTTMAYPVSPIAGRRSNWRSFAASLNLEDGPASSDSTSSPSEQT-SDGGEVYGDPSENLN 266 Query: 478 QNSV 489 + Sbjct: 267 SRKL 270 >11_06_0141 + 20559828-20559986,20560074-20560281,20560375-20560433, 20560532-20560590,20560809-20560886,20560974-20561073, 20561174-20561245,20561327-20561434,20561677-20561730, 20562847-20563296 Length = 448 Score = 28.3 bits (60), Expect = 8.7 Identities = 24/83 (28%), Positives = 37/83 (44%) Frame = +1 Query: 334 ANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKD 513 A K+ A GKV + S S+S PAR + + A + + D + +V PN + Sbjct: 63 ARKAKVAAAVANGKVGKKPALSQSASFPARGAAAKKAATPKQAKTTDGKGAV--PNGSEK 120 Query: 514 FFVASGCKNGNSIRLPGSSFT*P 582 + K NS R P +S + P Sbjct: 121 AAGRAVEKKVNSARTPAASRSLP 143 >07_03_0265 + 15976331-15976645,15977575-15977784,15977869-15977916, 15978307-15978675,15978736-15978747,15978763-15978870, 15979156-15979493,15980313-15980430,15983247-15984107, 15984457-15984750 Length = 890 Score = 28.3 bits (60), Expect = 8.7 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +1 Query: 319 MEELIANVRKLRAFKLGGKVTRGLLASDSSSTPAR 423 +EE+ NV RAF LG KV + LLA S A+ Sbjct: 852 LEEVKINVDCTRAFSLGSKVLKKLLALPRVSDKAK 886 >02_05_0752 + 31491462-31491921,31492177-31492271,31492346-31492573, 31493070-31493157,31493275-31493326,31493985-31494050, 31494382-31494536,31494633-31494703,31494820-31495017, 31495103-31495144,31496223-31496324,31496514-31496603, 31496708-31496783,31497299-31497395,31497488-31497557, 31497676-31497852,31498156-31498239,31498971-31499093, 31500143-31500226,31500318-31500502,31500592-31500730, 31500841-31500900,31500969-31501040,31501136-31501197, 31501839-31501945,31501984-31502058,31502800-31503248 Length = 1168 Score = 28.3 bits (60), Expect = 8.7 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -2 Query: 558 KSDGIPILAARGNEKVLTWVRGHY 487 KSDG+ +L + EKV+ W R HY Sbjct: 565 KSDGV-VLTRQKAEKVVGWARSHY 587 >01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308, 1240614-1241351 Length = 651 Score = 28.3 bits (60), Expect = 8.7 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +2 Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLKFG 265 LL C C + +F+C+E H VC + G Sbjct: 390 LLHCHACLQPLKPPVFKCDEAHIVCSGCRCG 420 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,339,614 Number of Sequences: 37544 Number of extensions: 446056 Number of successful extensions: 1169 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1168 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2503236492 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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