Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0172.Seq
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1186 + 34816774-34817055,34817216-34817334,34818139-348186...    29   5.2  
03_05_0041 - 20169308-20169317,20169485-20170491                       29   6.9  

>02_05_1186 +
           34816774-34817055,34817216-34817334,34818139-34818664,
           34818760-34818977,34819639-34819966
          Length = 490

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 232 LYYCWIWQAGSIIAHRIATETNY-TYIVLEAGSKGHGLLDIP 354
           L  CW+   G I++  ++  TNY  Y+V     + +G LD P
Sbjct: 141 LSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYG-LDFP 181


>03_05_0041 - 20169308-20169317,20169485-20170491
          Length = 338

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 332 VMVYWIFLFLVPFYINRFMIG-TMKHHHRKMLAGA 433
           +++  +FL  +PF I R M G T+ H  R  +AGA
Sbjct: 186 ILLVILFLVSIPFLIKRIMDGETLFHDRRVWMAGA 220


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,301,531
Number of Sequences: 37544
Number of extensions: 448287
Number of successful extensions: 841
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)