Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b24r
         (681 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0606 - 5321751-5321819,5321950-5322192,5322279-5322377,532...    44   1e-04
03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,200...    42   3e-04
04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947...    32   0.37 
02_05_0174 - 26486955-26487728                                         29   3.4  

>08_01_0606 -
           5321751-5321819,5321950-5322192,5322279-5322377,
           5322463-5322942,5323069-5323167,5323306-5323427,
           5323517-5323635,5323734-5323801,5323889-5324074,
           5324169-5324244,5324339-5324418,5324505-5324561,
           5324980-5325122,5325208-5325352,5325652-5325813,
           5325893-5326078,5326263-5326355,5326437-5326597,
           5327005-5327109,5328263-5328278
          Length = 902

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = -3

Query: 673 AALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKI 539
           AA  P  LG +A+I KSF RIH +NL   G++PL F    D D +
Sbjct: 792 AAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSL 836


>03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,
            2008214-2008693,2008806-2008904,2009097-2009218,
            2009296-2009414,2009492-2009559,2009832-2010017,
            2010323-2010425,2010477-2010556,2010638-2010694,
            2010771-2010913,2010988-2011132,2011501-2011662,
            2011759-2011944,2012273-2012365,2012893-2013053,
            2013440-2013547,2013664-2013928
          Length = 995

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 20/45 (44%), Positives = 27/45 (60%)
 Frame = -3

Query: 673  AALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKI 539
            AA  P   G +A+I KSF RIH +NL   G++PL F +  D D +
Sbjct: 885  AAKGPMLQGVKAVIAKSFERIHRSNLAGMGIIPLCFKSGEDADTL 929


>04_04_1465 +
           33794225-33794389,33794471-33794597,33794669-33794799,
           33795153-33795254,33795337-33795420,33795504-33795731,
           33795934-33796038,33796376-33796731,33797146-33797303,
           33797399-33797505,33797852-33798061
          Length = 590

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -3

Query: 625 SFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNSLAPGKPV 479
           S  +IH   ++ +   PLTFA     D  KP  K+   GL    PG PV
Sbjct: 271 SMGKIHFEKIRMKPGKPLTFAEIVTEDSSKPSKKVLAFGL----PGNPV 315


>02_05_0174 - 26486955-26487728
          Length = 257

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQG-MLPLTFANAADYDKIKPDDKISL 515
           EHA +     G RA++ + +ARI   N    G + PL  A+   + + K  D +++
Sbjct: 154 EHAPVALGAAGARAVVAEGYARIFFRNSVATGEVYPLELADTGAWKECKTGDVVTV 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,303,012
Number of Sequences: 37544
Number of extensions: 246386
Number of successful extensions: 606
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)