BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_D10 (895 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 111 1e-24 02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 108 5e-24 02_02_0470 - 10700092-10700505 30 2.9 02_03_0307 + 17546263-17546299,17546522-17548018,17548859-175489... 29 3.8 10_08_0951 - 21769342-21769752 29 6.6 03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089... 28 8.7 >04_04_0211 - 23636377-23636532,23636624-23636805,23637853-23637959, 23637997-23638280 Length = 242 Score = 111 bits (266), Expect = 1e-24 Identities = 77/177 (43%), Positives = 99/177 (55%), Gaps = 4/177 (2%) Frame = +2 Query: 347 PTQEKIRASSGGRPFS--KHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 520 PT+ + +SS FS + + +R ++ GTV ILLAGR GKRVV + L SGLLLVT Sbjct: 71 PTKLRSPSSSNLPEFSLFRFILLMRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVT 130 Query: 521 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDI 700 GPF N P+RR+ Q YVI TST++ + + K F+D YF EG ++ Sbjct: 131 GPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG-EL 185 Query: 701 FATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGXLKAGFGLXSXQYPH 865 F T+KE K +P E +K DQK VD +IKAI A PD K G A F L PH Sbjct: 186 FETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPDLKTYLG---ARFSLRDGDKPH 238 >02_04_0433 - 22891261-22891509,22892181-22892301,22892405-22892496, 22892692-22892755,22892855-22892920,22893102-22893193, 22893991-22894050,22894181-22894270,22894484-22894613, 22895066-22895157,22895299-22895373,22895663-22895754, 22896496-22896586,22897541-22897574,22897745-22897791, 22899110-22899209,22899300-22899436,22900837-22901015, 22901146-22901188,22901264-22901297,22901839-22901948, 22902043-22902224,22903062-22903168,22903266-22903480 Length = 833 Score = 108 bits (260), Expect = 5e-24 Identities = 77/182 (42%), Positives = 100/182 (54%), Gaps = 7/182 (3%) Frame = +2 Query: 296 KNGGTRTVPLK----RRKSFYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGR 460 KNGGT K FYP + K RA S + + ++R + GTV ILLAGR Sbjct: 31 KNGGTFPKAGKPAAAAEPKFYPADDVKPRAPSTRKA---NPTKLRSTITPGTVLILLAGR 87 Query: 461 HAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDY 640 + GKRVV + L SGLLL+TGPF N P+RR+ Q YVI TST++ + K+ K F+D Y Sbjct: 88 YMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVIATSTKVDISGVKVDK-FDDKY 146 Query: 641 FXXXXXXXXXXXXXXEGDDIFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVL 814 F EG ++F T+KE K +P + +K DQK VD +IKAI PD K Sbjct: 147 F---ARDKKAKAKKTEG-ELFETEKEATKNLP-DFKKDDQKAVDAELIKAIEVVPDLKSY 201 Query: 815 RG 820 G Sbjct: 202 LG 203 >02_02_0470 - 10700092-10700505 Length = 137 Score = 29.9 bits (64), Expect = 2.9 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 422 LKIGTVCILLAGRHAGKRVVLVGILPSG 505 LK G ILL GR+AG++ V+V + G Sbjct: 5 LKPGKAVILLQGRYAGRKAVIVRVFEEG 32 >02_03_0307 + 17546263-17546299,17546522-17548018,17548859-17548949, 17549054-17549621,17550591-17550670,17550993-17551077, 17551172-17551263,17551355-17551423,17551587-17551655, 17552217-17552510,17552761-17552797,17552883-17552972, 17553520-17553585,17553704-17553818,17553902-17553940, 17554519-17554700 Length = 1136 Score = 29.5 bits (63), Expect = 3.8 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 555 AFLSAM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSN 680 AFL+ + PP + H C N S++I R + N QSN Sbjct: 544 AFLNLVAKFPPTKRHINAEACSNLSLLIDDMRRKLNLNEQSN 585 >10_08_0951 - 21769342-21769752 Length = 136 Score = 28.7 bits (61), Expect = 6.6 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 Query: 422 LKIGTVCILLAGRHAGKRVVLVGILPSG 505 LK G ILL GR AG++ V+V + G Sbjct: 5 LKPGKAVILLQGRFAGRKAVIVRVFEEG 32 >03_05_0530 - 25306788-25306919,25307446-25308037,25308152-25308975, 25309533-25309592,25310115-25310180,25310318-25310461, 25310616-25310756,25310898-25311056,25311818-25311884, 25311986-25312158,25312237-25312333,25312410-25312528, 25312867-25312951,25313120-25313321,25314456-25314633 Length = 1012 Score = 28.3 bits (60), Expect = 8.7 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Frame = -1 Query: 100 GSRLGHRFRLCW---SHIQTGLNLKEFPIV 20 G R HR LCW SHI++ ++ FP++ Sbjct: 429 GGRFQHRICLCWSYGSHIRSFCHMAAFPVL 458 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,947,649 Number of Sequences: 37544 Number of extensions: 520721 Number of successful extensions: 1249 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1206 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1246 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2518669100 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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