BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_C13 (936 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968... 31 1.7 04_01_0176 + 2003707-2004130,2004689-2004861 29 5.3 03_06_0149 - 31987183-31987630,31987813-31987874 29 5.3 06_03_0335 + 19662933-19663334,19663358-19664023 29 7.0 06_03_0218 + 18219956-18220555 29 7.0 03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343 29 7.0 10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 9.3 08_01_0086 - 629043-629594 28 9.3 >06_03_0833 - 25196091-25196372,25196464-25196565,25196640-25196838, 25196978-25197278,25197471-25197645,25197842-25198012, 25198207-25198239 Length = 420 Score = 30.7 bits (66), Expect = 1.7 Identities = 16/53 (30%), Positives = 21/53 (39%) Frame = +1 Query: 517 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTXRFPLEAPSCALLFRPCRLP 675 CWR + T D Q + +KD P + PSC L+F P P Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335 >04_01_0176 + 2003707-2004130,2004689-2004861 Length = 198 Score = 29.1 bits (62), Expect = 5.3 Identities = 21/56 (37%), Positives = 27/56 (48%) Frame = -3 Query: 853 VAXNVTVIXXVPKXAAVGLNGGSCXTAQLERTTYTELRYLQREL*ESATLPEGRKA 686 +A VT P+ AAV LNGGS +++L TT L L +P GR A Sbjct: 61 LAAAVTPRSDAPQVAAVDLNGGSSSSSRLTTTTPPPLLQLGCRQALPFIVPTGRCA 116 >03_06_0149 - 31987183-31987630,31987813-31987874 Length = 169 Score = 29.1 bits (62), Expect = 5.3 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -2 Query: 725 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRXV 612 A+ + H R + + +R+GR R AHEG G V Sbjct: 76 AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIGAEPV 113 >06_03_0335 + 19662933-19663334,19663358-19664023 Length = 355 Score = 28.7 bits (61), Expect = 7.0 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -2 Query: 779 HSPAGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 624 H P A LH +P A R+R A RR G+V+ R GA+ G Sbjct: 142 HRPLAARPLHVPGVPRAPGARRRAAQRRR--GRVAAAAAAAPVRPVAGAAHG 191 >06_03_0218 + 18219956-18220555 Length = 199 Score = 28.7 bits (61), Expect = 7.0 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = -2 Query: 704 SRREKGGQVSG--KRQGRNRRAHEGASRGKRXVS 609 +RRE+ + +G KR+GR R G RGKR S Sbjct: 106 ARRERRLEAAGAEKREGRRRGGSSGGLRGKRRAS 139 >03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343 Length = 356 Score = 28.7 bits (61), Expect = 7.0 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Frame = +1 Query: 349 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 504 P PRS RC GCG R Q TQR P N IT E TC ++ P + Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203 >10_08_0940 - 21708557-21708733,21709058-21709142,21709330-21709551, 21710640-21710815,21711883-21711946,21712433-21712507, 21715114-21715199,21715297-21716715 Length = 767 Score = 28.3 bits (60), Expect = 9.3 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%) Frame = +1 Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381 +ESAN AR EAV +G +P+ L RC+R Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464 >08_01_0086 - 629043-629594 Length = 183 Score = 28.3 bits (60), Expect = 9.3 Identities = 21/82 (25%), Positives = 30/82 (36%) Frame = -2 Query: 863 YVTXXXECYGDQXSTEXXSGRAERGFVXHSPAGANDLHRTEIPTA*AMRKRHASRREKGG 684 Y T C G +G RG++ + L R+ A R A++ E GG Sbjct: 6 YWTFHRTCGGHIVGRHGGAGGDRRGYIPSDDGVCDHLERSR-----ASRGEEAAQVEGGG 60 Query: 683 QVSGKRQGRNRRAHEGASRGKR 618 + G RR H G+R Sbjct: 61 EARGGGAQWGRRRHGWRGEGRR 82 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,577,456 Number of Sequences: 37544 Number of extensions: 487634 Number of successful extensions: 1474 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1430 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1474 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2682675460 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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