BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_C05 (624 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 226 1e-59 02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 223 1e-58 06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 51 9e-07 01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 50 1e-06 11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 32 0.32 11_06_0092 + 19973364-19975983,19976272-19976648 31 0.56 05_03_0246 + 10895627-10895829,10897012-10897078,10898258-108984... 29 2.3 04_04_0028 - 22243272-22243577,22244564-22244713,22244919-222456... 29 3.0 07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 29 4.0 01_07_0036 + 40647046-40647100,40647120-40647571,40648135-406482... 29 4.0 01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 4.0 10_06_0112 + 10899079-10900656,10900761-10900920,10900948-109010... 28 5.2 12_02_0881 - 23970143-23970433,23970814-23971116,23971490-239720... 28 6.9 06_03_0600 - 22640194-22640643,22640754-22640915,22641018-226410... 27 9.2 02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 27 9.2 02_04_0098 + 19701999-19702185,19703698-19704551,19704732-197048... 27 9.2 >06_03_1014 - 26902971-26903085,26903182-26903270,26904302-26904380, 26904488-26904585,26904848-26904952,26905031-26905117, 26905218-26905412,26905890-26905996,26906559-26906754, 26906865-26906966,26907100-26907171,26907404-26907505, 26907638-26907675,26907769-26907880,26907972-26908028, 26908122-26908177,26908283-26908409,26908856-26908910, 26908919-26909049 Length = 640 Score = 226 bits (553), Expect = 1e-59 Identities = 107/168 (63%), Positives = 130/168 (77%) Frame = +1 Query: 118 RFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVG 297 R G V AVSGPVV A+ M G+AMYELVRVG + L+GEIIRLEGD ATIQVYEET+G+ V Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVN 115 Query: 298 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWEFN 477 DPVLRT KPLSVELGPGILG+IFDGIQRPLK I + +YIP+G++VP+L ++ W+F Sbjct: 116 DPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDQLWDFE 175 Query: 478 PLNVKVGSHITGGDLYGIVHXNTLVKHRMLVPPKAKGTVTYIXPAGNY 621 P + VG ITGGDLY V NTL+KH + +PP + G ++YI PAG Y Sbjct: 176 PKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMGKISYIAPAGQY 223 >02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770, 4121841-4121912,4122017-4122128,4122247-4122284, 4122412-4122513,4122619-4122675,4122755-4122826, 4122992-4123093,4123210-4123405,4123988-4124094, 4124497-4124691,4124771-4124857,4124905-4124913, 4125599-4125703,4126067-4126164,4126250-4126328, 4126912-4127000,4127086-4127200 Length = 629 Score = 223 bits (544), Expect = 1e-58 Identities = 107/172 (62%), Positives = 133/172 (77%), Gaps = 5/172 (2%) Frame = +1 Query: 121 FGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGD 300 +GYV VSGPVV A+ M G+AMYELVRVG++ L+GEIIRLEGD ATIQVYEET+G+ V D Sbjct: 19 YGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVND 78 Query: 301 PVLRTGK-----PLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVD 465 PVLRT K PLSVELGPGILG+IFDGIQRPLK I + +YIP+G++VP+L ++ Sbjct: 79 PVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDAL 138 Query: 466 WEFNPLNVKVGSHITGGDLYGIVHXNTLVKHRMLVPPKAKGTVTYIXPAGNY 621 W F P + VG ITGGDLY IV+ NTL++H++ +PP A G ++YI PAG Y Sbjct: 139 WHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYIAPAGQY 190 >06_03_0510 - 21615724-21615909,21615992-21616075,21616164-21616217, 21616324-21616371,21616529-21616611,21616963-21617113, 21617648-21617785,21617966-21618094,21618391-21618596, 21618734-21618845,21619145-21619204,21619331-21619429, 21619520-21619575,21620230-21620313,21621407-21621500 Length = 527 Score = 50.8 bits (116), Expect = 9e-07 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%) Frame = +1 Query: 130 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 297 V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+ Sbjct: 64 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 123 Query: 298 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 423 V TG+ L + +LG IF+G +P+ + + Y+ Sbjct: 124 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 165 >01_06_0458 + 29531069-29531126,29531247-29531302,29531407-29531505, 29531989-29532048,29532285-29532396,29532459-29532694, 29533092-29533220,29533325-29533462,29534043-29534193, 29534394-29534476,29534658-29534705,29534828-29534881, 29534971-29535054,29535152-29535337 Length = 497 Score = 50.4 bits (115), Expect = 1e-06 Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%) Frame = +1 Query: 130 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 297 V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+ Sbjct: 24 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 83 Query: 298 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 423 V TG+ L + +LG +F+G +P+ + + Y+ Sbjct: 84 TTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEAYL 125 >11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577, 5513752-5514597,5515515-5515766,5522344-5525206 Length = 1449 Score = 32.3 bits (70), Expect = 0.32 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = +1 Query: 163 EKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVE 336 EKMS + EL+ +GYN+L G I M + + + ++ +G + G LS++ Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAIPESIATMGNLGLLDVSNNHILGPLPTQIGTLLSIQ 526 >11_06_0092 + 19973364-19975983,19976272-19976648 Length = 998 Score = 31.5 bits (68), Expect = 0.56 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +1 Query: 220 VGEIIRLEGDMAT--IQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 387 VG GD+ + I V E +G+ D RTG L + PG+ G + D + R L Sbjct: 877 VGNTASTHGDIYSYGILVLETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934 >05_03_0246 + 10895627-10895829,10897012-10897078,10898258-10898433, 10898450-10898583,10900165-10901594 Length = 669 Score = 29.5 bits (63), Expect = 2.3 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = -3 Query: 328 TKAFQYGVLDHLQLHLKFLRIPGWWPCHLQDG*SHRRVHCNRH 200 T AF Y L H L L+ P W P + R V NRH Sbjct: 247 TAAFPYNCLIHAHLRLRGSASPPWGPLRIFSAMLARGVRPNRH 289 >04_04_0028 - 22243272-22243577,22244564-22244713,22244919-22245656, 22247233-22247331,22247541-22247933,22248806-22248961 Length = 613 Score = 29.1 bits (62), Expect = 3.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +2 Query: 155 SLPKKCPDLLCTSWSVSVTMNSSVRLSVLKVTW 253 + P CPDL+CT S + ++R SVL W Sbjct: 210 AFPGCCPDLICTILS-KLPQKEAIRTSVLSSKW 241 >07_03_0537 - 19218461-19218982,19219482-19219868,19219993-19220154, 19220464-19221117,19221233-19221277,19223300-19223845, 19223930-19224307,19224642-19225313,19225373-19225456 Length = 1149 Score = 28.7 bits (61), Expect = 4.0 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Frame = +2 Query: 122 SDMS-SPY--LDPSSLPKKC--PDLLCTSWSVSVTMNSSVRLSVLKVTWPPSRYTKK 277 SD++ PY +DP+S+PK C PD LC S + V+ N LK + P R+ ++ Sbjct: 846 SDVNWEPYKGVDPASIPKHCAAPDNLCFSRTWLVSFN-------LKEIYAPDRFARQ 895 >01_07_0036 + 40647046-40647100,40647120-40647571,40648135-40648257, 40648407-40648461,40648613-40648722,40649352-40649531, 40650003-40650101,40651182-40651280,40652195-40652289, 40652290-40652378,40652739-40652901,40653299-40653404, 40655647-40655829,40656059-40656286,40656373-40656486 Length = 716 Score = 28.7 bits (61), Expect = 4.0 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +1 Query: 406 TQSIYIPKGINVPSLAREVDWEFNPLNVKVGS--HITGGDLYGIVHXNTLVKHRMLVPPK 579 ++S+ IPKGI +PS D E + N K S G DL + H N LV PK Sbjct: 457 SKSLKIPKGIKIPSYCNGCDCEGDCANNKNCSCAQRNGSDLPYVSHKNI----GRLVEPK 512 Query: 580 A 582 A Sbjct: 513 A 513 >01_06_0813 - 32165310-32165546,32165691-32165783,32166075-32166218, 32166685-32166771,32166858-32167077,32167879-32168039 Length = 313 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = -1 Query: 219 EFIVTDTDQLVHSRSGHFFGSDDGSRYGEDISEPL 115 EF+V +T++L H + G + D+ + ED+ EPL Sbjct: 115 EFMVRETEKL-HQQVGRYKSPDEHPFFPEDLPEPL 148 >10_06_0112 + 10899079-10900656,10900761-10900920,10900948-10901028, 10901264-10901517 Length = 690 Score = 28.3 bits (60), Expect = 5.2 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = -2 Query: 572 GTNILCLTRVXSCTIPYKSPPVMWDPTLTFNGLNSQSTSLAREGTL 435 GTN T+ +P + PP + D TF+ L Q ++ E TL Sbjct: 214 GTNDQICTQQLMALVPPRLPPELADAAATFSPLAPQGVTVKDERTL 259 >12_02_0881 - 23970143-23970433,23970814-23971116,23971490-23972077, 23972606-23972761,23972852-23972910,23974294-23974561 Length = 554 Score = 27.9 bits (59), Expect = 6.9 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Frame = +1 Query: 325 LSVELGPGILGSIFDGIQRPLKDINELTQSI---YIPKGINVPSLAREVDWE 471 L LGP +LG DG R ++D+ + I +P + VP E W+ Sbjct: 92 LGRRLGPRLLGRGNDGSMRVMRDLYRMLDEINSEEVPVDLKVPDSFDEFIWD 143 >06_03_0600 - 22640194-22640643,22640754-22640915,22641018-22641062, 22641230-22641322,22642815-22642901,22642963-22643049 Length = 307 Score = 27.5 bits (58), Expect = 9.2 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +2 Query: 122 SDMSSPYLDPSSLPKKCP 175 SD+SSP DPS + + CP Sbjct: 106 SDLSSPLTDPSHMDEDCP 123 >02_05_1006 + 33448476-33448915,33449016-33449083,33449681-33449751, 33449905-33450156,33450473-33450636,33450731-33450773, 33451044-33451161,33451384-33451481,33451550-33451594 Length = 432 Score = 27.5 bits (58), Expect = 9.2 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -3 Query: 502 GIRP*HLMG*IPSRPPWPGKAR 437 G RP MG PS PP PG++R Sbjct: 33 GRRPASAMGQAPSSPPGPGRSR 54 >02_04_0098 + 19701999-19702185,19703698-19704551,19704732-19704890, 19705290-19705537,19705837-19705927,19706066-19706251 Length = 574 Score = 27.5 bits (58), Expect = 9.2 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +1 Query: 337 LGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWEFNPL 483 L G ++ GI RP +IN Q+I PK + P L V +NP+ Sbjct: 126 LPDGTPAILYTGIDRP--NINYQVQNIAFPKNASDPLLREWVKPAYNPV 172 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,296,929 Number of Sequences: 37544 Number of extensions: 396618 Number of successful extensions: 1085 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1042 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1080 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1513903616 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -