Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B17
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820...    31   0.73 
10_08_0521 + 18500105-18500529,18501216-18501284,18501467-185015...    28   5.1  
04_04_0072 + 22524974-22525310,22526334-22526552,22526826-225275...    27   8.9  
02_05_0975 + 33227431-33227730,33228556-33228636,33228883-332296...    27   8.9  
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982...    27   8.9  

>02_05_0300 +
           27681204-27681656,27681745-27681840,27681933-27682022,
           27682126-27682227,27682310-27682456,27683608-27683748,
           27683749-27683808,27685133-27685230,27685308-27685410,
           27685954-27686037
          Length = 457

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 200 QEEGKLDNPQSENAALTVTGQYAYVAP-DGKHYTVTFTAGPNGFQPKTSL 346
           Q E  L  P  +  AL V  +  + A  DG+     F+A  NGF+P  SL
Sbjct: 220 QAEMNLTGPTGQVYALAVGNELLFAATQDGRILAWRFSAATNGFEPAASL 269


>10_08_0521 +
           18500105-18500529,18501216-18501284,18501467-18501555,
           18501726-18501838,18502023-18502124,18502576-18502663,
           18502795-18503361,18503766-18504149,18504168-18504384,
           18504466-18504548,18505174-18505256,18505796-18506032,
           18506481-18506658,18506814-18507328,18507740-18507916,
           18508385-18508768,18508885-18509031
          Length = 1285

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +2

Query: 173 YXTSDGTSRQEEGKLDNPQSENAAL---TVTGQYAYVAPDGKHYTVTFTAGPNG 325
           Y  S+G   +++ ++DN  +E A++    V+   AYV+P+    + T T   +G
Sbjct: 410 YLVSEGAQTKKQAQVDNETTEVASIHCCPVSNFSAYVSPEAAAQSATTTTWGSG 463


>04_04_0072 +
           22524974-22525310,22526334-22526552,22526826-22527532,
           22527664-22528482
          Length = 693

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 137 DSNVEPDGYSFAYXTSDGTSRQEEGKLDNPQSENAALTVTGQY 265
           D+++E D   + Y +      +E  ++DNPQ E       G+Y
Sbjct: 391 DADLESDALGWQYISGSLPDGRELDRIDNPQLEGYKFDPHGEY 433


>02_05_0975 + 33227431-33227730,33228556-33228636,33228883-33229680,
            33230829-33231005,33231159-33231274,33231422-33231520,
            33231598-33232040,33232147-33232184,33232343-33232600,
            33233378-33233525,33233989-33234108,33234884-33234984,
            33235090-33235213,33235386-33235498,33236103-33236214,
            33236298-33236432,33236527-33236593,33236685-33236741,
            33236774-33236900,33237221-33237338,33237418-33237929
          Length = 1347

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 286  AVRSYVSILSSNCQSCILGLWVVEFAFFLS--GCTITSXVRKAVAIGFH 146
            A  SY+  +   C+ C+L L +V   + L+   C+ITS   + +A   H
Sbjct: 996  ACGSYLFTILQKCKECVLCLHIVTALYSLNVEQCSITSRTVQKMADALH 1044


>02_04_0317 +
           21996324-21996681,21996833-21996859,21997299-21998227,
           21998317-21999162
          Length = 719

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 137 DSNVEPDGYSFAYXTSDGTSRQEEGKLDNPQSENAALTVTGQY 265
           D+++E D   + Y +      +E  ++DNPQ E       G+Y
Sbjct: 408 DADLESDALGWQYISGSLPDGRELDRIDNPQLEGYKFDPHGEY 450


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,230,045
Number of Sequences: 37544
Number of extensions: 309481
Number of successful extensions: 681
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)