Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30092
(828 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 53 3e-07
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 51 1e-06
12_02_1282 + 27528159-27529148,27529549-27529614 51 1e-06
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 49 4e-06
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 49 4e-06
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 49 4e-06
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 49 4e-06
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 49 4e-06
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 49 4e-06
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 49 4e-06
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 45 8e-05
01_04_0134 - 16481035-16481150,16481678-16481746,16482184-164825... 34 0.16
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 33 0.21
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 31 1.1
03_01_0054 - 461526-461696,462732-462870,462952-463034 31 1.5
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 30 2.0
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 30 2.0
02_04_0318 - 21999640-21999705,21999706-21999768,21999822-219998... 28 7.9
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 734 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAV 826
M D+D+ +V DNG+GM KAGFAGDDAPRAV
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAV 31
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2
Query: 734 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAV 826
M ++D+ +V DNG+GM KAGFAGDDAPRAV
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAV 31
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
DD+ LV DNG+GM KAGFAGDDAPRAV
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAV 32
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
+D+ LV DNG+GM KAGFAGDDAPRAV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAV 32
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
+D+ LV DNG+GM KAGFAGDDAPRAV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAV 32
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
+D+ LV DNG+GM KAGFAGDDAPRAV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAV 32
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
+D+ LV DNG+GM KAGFAGDDAPRAV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAV 32
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
+D+ LV DNG+GM KAGFAGDDAPRAV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAV 32
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
+D+ LV DNG+GM KAGFAGDDAPRAV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAV 32
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
+D+ LV DNG+GM KAGFAGDDAPRAV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAV 32
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 44.8 bits (101), Expect = 8e-05
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D+V+A+V+D GS CKAG+AGDD P+AV
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAV 32
>01_04_0134 -
16481035-16481150,16481678-16481746,16482184-16482503,
16482566-16482588
Length = 175
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 714 CVGDAGIDGSAAAEFGGRGSERPSTCG 634
C D+ DGSA + G G RPSTCG
Sbjct: 35 CEADSAGDGSATTKGGANGFRRPSTCG 61
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 758 LVVDNGSGMCKAGFAGDDAPRAV 826
+V+DNG G+ KAGF GD P AV
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAV 30
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 743 DDVAALVVDNGSGMCKAGFAGDDAPRAV 826
D +V DNG+G K GFAG++ P +V
Sbjct: 2 DSGNVVVCDNGTGYVKCGFAGENFPTSV 29
>03_01_0054 - 461526-461696,462732-462870,462952-463034
Length = 130
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 460 DVNDNCIVYMAH*KGSHNYAAKS*MTLLPALVMLVSRSVTLL 585
DV D +Y AH GSH+YA+ S LP L TL+
Sbjct: 26 DVRDEERIYDAHIAGSHHYASDSFGERLPELAQATKGKETLV 67
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 755 ALVVDNGSGMCKAGFAGDDAP 817
A+V+DNG+G K GF+G+ P
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEP 28
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 755 ALVVDNGSGMCKAGFAGDDAP 817
A+V+DNG+G K GFAG+ P
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEP 28
>02_04_0318 -
21999640-21999705,21999706-21999768,21999822-21999884,
21999938-22000000,22001097-22001141,22001914-22002325,
22003313-22003475,22004086-22004132,22004458-22004564,
22004651-22004684,22004754-22004807,22005599-22005723
Length = 413
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 574 HFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCSCHLHHTSL 449
+F +P LP A+R F+ H Y L PC+ C+ L T +
Sbjct: 363 YFLNP-LPYQAIRLFLPSWHCYYFLNPLPCQVCTTELSLTEI 403
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,775,994
Number of Sequences: 37544
Number of extensions: 406998
Number of successful extensions: 1023
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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