Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0091
(530 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630... 118 3e-27
06_02_0233 + 13315579-13316046 34 0.082
10_08_0410 - 17716370-17716743,17716839-17716939,17717104-177173... 30 1.3
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 29 1.8
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 29 1.8
06_03_0981 + 26527005-26527260,26527457-26527770 29 1.8
03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600 29 1.8
03_02_0451 - 8606376-8607152 29 2.3
12_02_1239 - 27275110-27275445 29 3.1
05_03_0288 - 11653136-11654074,11655252-11655965 29 3.1
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 29 3.1
08_02_1182 + 24992256-24992708,24992942-24993238 28 4.1
07_03_0061 + 12972944-12973054,12974509-12974536,12974701-129748... 28 5.4
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 27 7.1
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 27 7.1
02_01_0060 - 434731-435879 27 7.1
05_02_0038 + 5890103-5890522,5891442-5891515,5891605-5891680,589... 27 9.4
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 27 9.4
03_05_0964 - 29254947-29256183,29256275-29256381 27 9.4
03_02_0076 - 5451137-5452503,5453439-5453866,5453949-5454046,545... 27 9.4
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 27 9.4
02_01_0376 + 2723370-2723783,2723818-2724122,2724484-2724688 27 9.4
>02_05_0481 + 29361542-29361669,29362091-29362341,29362820-29363002,
29363099-29363206,29363583-29363697,29363781-29364819,
29364904-29365014,29365268-29365326,29366601-29366763,
29367162-29367435,29367530-29367680,29367766-29367877,
29367978-29368143,29368261-29368331,29368474-29368565,
29368721-29368883,29369134-29369205,29369236-29369263,
29369519-29369910,29369991-29370106,29370201-29370498,
29370820-29371139,29371332-29371590,29371985-29372302,
29372423-29372527,29372648-29372776,29374001-29374381,
29374467-29374604,29374949-29375185,29375264-29375569
Length = 2094
Score = 118 bits (284), Expect = 3e-27
Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 10/184 (5%)
Frame = +3
Query: 6 DVQQGELGDCWLLAAVANLTLHRKLFFQVVPDDQSFDEDYAGVFHFRFWQYGRWVDVVID 185
DV QG LGDCW L+AVA LT ++ ++ + ++E+ G++ RF G WV VV+D
Sbjct: 1695 DVCQGRLGDCWFLSAVAVLTEMARISEVIITPE--YNEE--GIYTVRFCIQGEWVAVVVD 1750
Query: 186 DRLPTYR-GKLVFLHSAEANEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVTEM 362
D +P GK F S + NE W ++LEKAYAKLHGSYEAL+GG +A+ D TGG E
Sbjct: 1751 DWIPCESPGKPAFATSRKQNELWVSILEKAYAKLHGSYEALEGGLVQDALVDLTGGAGEE 1810
Query: 363 YEMSE-------LPPNFYTILLKAYERNSLMGCSIE--PDPHILKAETPAGLIRGHAYSV 515
+M ++ LL + L+G D HI + +G+++GHAYS+
Sbjct: 1811 IDMRSPQAQIDLASGRLWSQLLHFKQEGFLLGAGSPSGSDAHI----SSSGIVQGHAYSI 1866
Query: 516 TRVK 527
+V+
Sbjct: 1867 LQVR 1870
>06_02_0233 + 13315579-13316046
Length = 155
Score = 33.9 bits (74), Expect = 0.082
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 162 ARTARNGNGRRPHNLHRNSDHQVQLGRITCDEVSSWQRQPTANNR 28
+RTA G GRRPH GR++ + S WQR+P R
Sbjct: 55 SRTASRGRGRRPHPAGTAVFGGGVGGRLSAERRSRWQRRPARRER 99
>10_08_0410 -
17716370-17716743,17716839-17716939,17717104-17717300,
17717392-17717677,17717768-17718004,17718226-17718281,
17720042-17721226
Length = 811
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 414 YERNSLMGCSIEPDPHILKAETPAGLIR 497
Y R L G + P PH+ + E P GL R
Sbjct: 81 YARRMLQGVVLRPPPHLPQPEAPPGLTR 108
>10_05_0026 +
8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -1
Query: 293 RSVEFRICLLE*STPELVRLGRVEEHQFPSVRWETVVDDHVHPAPVLPETEMEDARIIFI 114
R +EFRI L+ +TP R R+ ++ V+ + VDD + + P + A +IF+
Sbjct: 718 RDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQ--VDDLLQKGYIRPSSSPWGAPVIFV 775
Query: 113 E 111
E
Sbjct: 776 E 776
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -1
Query: 293 RSVEFRICLLE*STPELVRLGRVEEHQFPSVRWETVVDDHVHPAPVLPETEMEDARIIFI 114
R +EFRI L+ +TP R R+ ++ V+ + VDD + + P + A +IF+
Sbjct: 208 RDIEFRIDLVPGTTPIHKRPYRMATNELAEVKRQ--VDDLLQKGYIRPSSSPWGAPVIFV 265
Query: 113 E 111
E
Sbjct: 266 E 266
>06_03_0981 + 26527005-26527260,26527457-26527770
Length = 189
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 149 LAVRALGGRGHRRPSPNVPRETG-VPPLGRGERVLECS 259
LA AL G G RP P+ PR+ + GRGE ++ S
Sbjct: 56 LACAALAGSGRPRPVPSPPRQRACLCRYGRGENLVPAS 93
>03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600
Length = 274
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 458 PHPQGGDSGGAHPGARVLRDPG 523
PHP+ G GG GAR RD G
Sbjct: 83 PHPESGGGGGGGGGAREWRDVG 104
>03_02_0451 - 8606376-8607152
Length = 258
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 382 GSSDISYISVTPPVKSSMASQV-EPPLRASYDPWSFAYAFSSRALQNSFAS 233
G D+ + TP SS A+ V PPL ++ W+ AF+S + A+
Sbjct: 183 GGGDVLDHATTPSSSSSAAANVCSPPLEGDHELWTELDAFASPKFMDLMAA 233
>12_02_1239 - 27275110-27275445
Length = 111
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 7/33 (21%)
Frame = +1
Query: 280 NSTDRTKPSREAR-------PARPWRTSPAASP 357
++ D +P+ EA PA+PWR SP+A+P
Sbjct: 4 HAADARRPAHEAALRAVQKPPAKPWRASPSAAP 36
>05_03_0288 - 11653136-11654074,11655252-11655965
Length = 550
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 146 FLAVRALGGRGHRRPSPNVPRETGVPP 226
FL R LGGR H RP+ +PP
Sbjct: 18 FLQRRFLGGRHHHRPTSTTATGAAIPP 44
>04_01_0293 +
3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -1
Query: 293 RSVEFRICLLE*STPELVRLGRVEEHQFPSVRWETVVDDHVHPAPVLPETEMEDARIIFI 114
R +EFRI L+ +TP R R+ ++ V+ VDD + + P + A +IF+
Sbjct: 519 RDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRH--VDDLLQKGYIRPSSSPWGAPVIFV 576
Query: 113 E 111
E
Sbjct: 577 E 577
>08_02_1182 + 24992256-24992708,24992942-24993238
Length = 249
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 223 STRPRRTSSGVL-YSRRHMRNSTDRTKPSREARPARP 330
+ RPRR +L +RH ++ D P+ ARP RP
Sbjct: 53 AARPRRRLRSLLPQPQRHADDADDAAPPTAAARPRRP 89
>07_03_0061 +
12972944-12973054,12974509-12974536,12974701-12974870,
12975878-12976043,12976122-12976425,12977155-12977350,
12977464-12977622,12978311-12978371,12978904-12978967,
12979099-12979346,12980039-12980250,12980344-12980456,
12980547-12980623,12980710-12980873,12981493-12981564,
12981565-12981760,12981813-12981854,12982358-12982440,
12982534-12982671,12982942-12983124,12983216-12983263
Length = 944
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 202 YVGRRSSMTTSTQRPYCQKRKWKTP 128
YV S T ST P K+KWK P
Sbjct: 291 YVSEWSKCTYSTTEPVRSKKKWKIP 315
>07_03_1567 - 27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Frame = +3
Query: 147 FWQYGRWVDVVIDDRL-------PTYRGKL-VFLHSA-EANEFWSALLEKAYAKLHGSYE 299
++ YG W + +D +L P G+ FL A + SALL+K +A L G
Sbjct: 1343 WYGYGNWEKIRLDPKLSLTAKIAPATLGERETFLPRAPNLDNRASALLQKEFANLRGKSS 1402
Query: 300 ALKGGSTCEAMEDFTGGVTEM 362
KGG + GG +
Sbjct: 1403 KAKGGPRQAIDNESNGGARSL 1423
>04_04_1571 +
34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 383 RQFGHLVHFGDAAGEVLHGLAGRASLEG 300
+ + V+ GDA+G VLH + G ASLEG
Sbjct: 753 QHLSNYVYDGDASG-VLHSIFGVASLEG 779
>02_01_0060 - 434731-435879
Length = 382
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 209 ETGVPPLGRGERVLECSTREGICETPRI 292
E G+P +GRGE V E G+ TPR+
Sbjct: 229 EKGMPFMGRGEYVEEHGQWFGLSSTPRL 256
>05_02_0038 +
5890103-5890522,5891442-5891515,5891605-5891680,
5891892-5891959,5892189-5892312,5892714-5892812,
5893576-5893677,5893759-5893895,5894068-5894149,
5894668-5894730,5895680-5895727,5895833-5895895,
5896055-5896108,5896190-5896294
Length = 504
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 285 GVSHMPSRVEHSRTRSPRPSGGT 217
G +H P+ H R PRP GG+
Sbjct: 13 GEAHAPAAPAHHHRRPPRPRGGS 35
>04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -1
Query: 437 AHKRVPLVRL--QQDRVEVWRQFGHLVHFGDAAG-EVLH 330
+ + +P V L + DRV V R V+FGDA EVLH
Sbjct: 2323 SERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLH 2361
>03_05_0964 - 29254947-29256183,29256275-29256381
Length = 447
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 117 HRNSDHQVQLGRITCDEVSSWQRQPTANNRPTLLVG 10
HR S H + TC+ VS+W+ P ++ P L+G
Sbjct: 357 HR-SLHVFSVDMTTCEFVSAWRLPPWRHSGPPSLIG 391
>03_02_0076 -
5451137-5452503,5453439-5453866,5453949-5454046,
5454723-5454836,5455017-5455111,5455222-5455283,
5455398-5455557,5456247-5456643
Length = 906
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 167 GGRGHRRPSPNVPRETGVPPLGRGER 244
GGR H P P G P GRG R
Sbjct: 793 GGRDHGDPPPEGENPNGPPGFGRGGR 818
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = -1
Query: 473 RLEDVGVGLNTAAHKRVPLVRLQQDRVEVWRQ 378
R+E+V + L+ + +R+ L L + R++ W++
Sbjct: 726 RIEEVKLMLDDSTKRRIELEELSETRIQFWKK 757
>02_01_0376 + 2723370-2723783,2723818-2724122,2724484-2724688
Length = 307
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -2
Query: 328 ASQVEPPLRASYDPWSFAYAFSSRALQNSFASAEWR--NTSFPRYVG 194
+ ++P +S D S + SSR + F+S +WR SF R G
Sbjct: 154 SDNLDPDSNSSVDQESLEWPLSSRCTTHVFSSRKWRWEERSFVRQQG 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,957,157
Number of Sequences: 37544
Number of extensions: 412094
Number of successful extensions: 1732
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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