Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0134
         (707 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0153 + 17300907-17301455                                         30   2.1  
03_02_0651 + 10183050-10184167,10184350-10184974,10185023-101852...    29   2.7  
09_04_0138 - 15021764-15021953,15023112-15023464,15023878-150240...    29   3.6  
11_01_0475 - 3669734-3671452                                           28   6.3  
01_06_0167 + 27152535-27152570,27152760-27152853,27153632-271537...    28   6.3  
03_02_0750 + 10909130-10909616,10912257-10912916,10913139-109135...    28   8.4  

>06_03_0153 + 17300907-17301455
          Length = 182

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +3

Query: 522 IVPPGVPATIEQAARMLSERGVQLSIRAAPAHRCAELLVRE 644
           I  P VP T+ QA  +LS   V+ + RA  A RC    VRE
Sbjct: 39  IPTPRVPVTLAQAGEVLSLGEVEAAARAGDAARCG-AAVRE 78


>03_02_0651 +
           10183050-10184167,10184350-10184974,10185023-10185208,
           10185325-10185660
          Length = 754

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 548 YRASGQDAERTRSSAIDTSRPGASL 622
           Y A+G+D +R      DT RPG+S+
Sbjct: 387 YNAAGEDLQRATKECADTLRPGSSV 411


>09_04_0138 -
           15021764-15021953,15023112-15023464,15023878-15024066,
           15024171-15024299,15024469-15024642
          Length = 344

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
 Frame = +1

Query: 229 CSRRRQWYCSVYAIVTYKAADC--HPGV------PVSVYGPFNNPQNVVEAVDKIQFIGG 384
           C + + WYC   A+   +A       GV      PV V GP   P     AV  ++++ G
Sbjct: 160 CKKTKNWYCYGKAVAEQEACKAAEERGVDLVVVSPVLVVGPLLQPTVNASAVHILKYLDG 219

Query: 385 HAESRACITEA 417
            A+  A   +A
Sbjct: 220 SAKKYANAVQA 230


>11_01_0475 - 3669734-3671452
          Length = 572

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +1

Query: 319 YGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALTCFDEFGRI 459
           + PF+ P    EA       G H     C+     ++  CFD F RI
Sbjct: 41  FPPFSTPDAKTEAASVFSSGGHHVLVSLCLDAPPASSRVCFDFFPRI 87


>01_06_0167 +
           27152535-27152570,27152760-27152853,27153632-27153738,
           27153877-27153963
          Length = 107

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +1

Query: 106 TGNSCTSGDSVCD*GDRC*RCLHKRTKSKLSYTHIRIFPWRCSRR 240
           TG     G  +C    RC RC+H   K KL      +F +R  R+
Sbjct: 43  TGGVHLFGRLICTPSSRCYRCIHIVPKGKLHSCMALLFNYRFYRK 87


>03_02_0750 +
           10909130-10909616,10912257-10912916,10913139-10913544,
           10914376-10914757,10914918-10915679,10916106-10916165,
           10916695-10917105
          Length = 1055

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -2

Query: 679 LCGACNRSPAGGSRTRSSAQRCAGAARIDS*TPRSLSILAACSIVA---GTPGG 527
           +CG C    AGG+    +A    G  R  + T  +L  LAA + VA   GT GG
Sbjct: 1   MCGDCCGRGAGGAAEAGAAGAGGGRKRGCAGTALALVALAAAAAVAVLEGTAGG 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,625,374
Number of Sequences: 37544
Number of extensions: 431424
Number of successful extensions: 1178
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)