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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0100
         (724 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203...   110   9e-25
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393    109   3e-24
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666    102   3e-22
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318    102   3e-22
05_01_0103 + 686770-687017,687120-687270                               99   2e-21
03_06_0479 + 34217170-34217172,34217337-34217786                       99   3e-21
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477...    99   3e-21
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928...    97   1e-20
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378     79   4e-15
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084     58   9e-09
12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665           29   4.9  
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250...    28   6.5  
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895...    28   6.5  

>03_06_0480 +
           34218403-34218405,34219071-34219127,34220047-34220312,
           34220402-34220552
          Length = 158

 Score =  110 bits (265), Expect = 9e-25
 Identities = 52/143 (36%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 230
           +SGV + D CK  + E++  + HR++ F + ++ K+I V+ +G+R   YE F   L +G 
Sbjct: 24  SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG- 82

Query: 231 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 410
             +CR+ ++DF++      T+E   K ++F + W PD AKV+ KMLY+SS +  KK L G
Sbjct: 83  --DCRFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNG 135

Query: 411 VQKYIQATDLSEASHEAVEXKLR 479
           +Q  +QATD  E S +A++ +++
Sbjct: 136 IQLEVQATDAGEISLDALKDRVK 158


>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
          Length = 158

 Score =  109 bits (261), Expect = 3e-24
 Identities = 56/141 (39%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 230
           ASG+ V D CK  + E+K  +  R++VF I ++ +Q+ V+ +G+    Y+ F   L    
Sbjct: 24  ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80

Query: 231 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 410
             ECRY +FDF++      T E  +K K+F +SW PDT++V+ KMLY+SS D  K+ L G
Sbjct: 81  ADECRYAVFDFDFV-----TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDG 135

Query: 411 VQKYIQATDLSEASHEAVEXK 473
           +Q  +QATD SE S + V+ +
Sbjct: 136 IQVELQATDPSEMSMDIVKSR 156


>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
          Length = 145

 Score =  102 bits (244), Expect = 3e-22
 Identities = 49/141 (34%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 230
           +SG+ V+  CK T+ E+++ K HRYV+F I D+ K++ VE  G     ++ F++ L +  
Sbjct: 11  SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES- 69

Query: 231 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 410
             +CRY ++DF++      T E  +K K+F ++W P  ++++ KMLY++S +  ++ L G
Sbjct: 70  --DCRYAIYDFDFV-----TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDG 122

Query: 411 VQKYIQATDLSEASHEAVEXK 473
           V   IQATD SE   E +  +
Sbjct: 123 VHYEIQATDPSELDIELLRER 143


>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
          Length = 145

 Score =  102 bits (244), Expect = 3e-22
 Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
 Frame = +3

Query: 60  GVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTG 236
           G+ V+D CK  ++E+K  +  R++VF I D+  +I VE +G+    YE F   L      
Sbjct: 13  GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69

Query: 237 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQ 416
           ECRY ++D ++      T E  +K K+F  SW PDTA+ + KMLY+SS D  ++ L G+Q
Sbjct: 70  ECRYAVYDLDFV-----TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQ 124

Query: 417 KYIQATDLSEASHEAVEXK 473
             IQATD SE S + +  +
Sbjct: 125 CEIQATDPSEMSLDIIRAR 143


>05_01_0103 + 686770-687017,687120-687270
          Length = 132

 Score =   99 bits (238), Expect = 2e-21
 Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
 Frame = +3

Query: 63  VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 239
           + V D CK  + E+K  + +R++++ I ++K+ + VE VGE    Y+ F   L      E
Sbjct: 1   MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57

Query: 240 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK 419
           CRY +FD+++      T E  +K K+F ++W PDT++V+ KM+Y+SS D  K+ L G+Q 
Sbjct: 58  CRYAIFDYDFV-----TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQV 112

Query: 420 YIQATDLSEASHEAVEXK 473
            +QATD +E   + +  +
Sbjct: 113 ELQATDPTEVGLDVIRGR 130


>03_06_0479 + 34217170-34217172,34217337-34217786
          Length = 150

 Score = 99.1 bits (236), Expect = 3e-21
 Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 7/144 (4%)
 Frame = +3

Query: 57  SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGT 233
           SGV VS+ CK  ++E++  + HR+VVF I D  +Q+ V+ VG R+A +++    L   G 
Sbjct: 6   SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64

Query: 234 GECRYGLFDFEYT-HQCQGTSEASK-----KQKLFLMSWCPDTAKVKKKMLYSSSFDALK 395
             CRY ++D ++T      T+ A +     + K+F +SW P  A V+ KM+Y+SS +  K
Sbjct: 65  --CRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFK 122

Query: 396 KSLVGVQKYIQATDLSEASHEAVE 467
           K L GVQ  +QATD SE + + ++
Sbjct: 123 KELDGVQIDLQATDPSELTLDVLK 146


>03_06_0174 -
           32141956-32141985,32143658-32144452,32147645-32147759,
           32148134-32148399,32150193-32150213
          Length = 408

 Score = 99.1 bits (236), Expect = 3e-21
 Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
 Frame = +3

Query: 27  FLRE*HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQ 203
           F+R  H   +SG+ V+   + T+ E++  K  RYV+F I + +KQ+ VE  G     Y+ 
Sbjct: 3   FMRS-HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDD 61

Query: 204 FLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSF 383
           FL  L +    +CRY L+DF++      T E  +K K+F ++W P T++++ KMLYS+S 
Sbjct: 62  FLASLPEN---DCRYALYDFDFV-----TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSK 113

Query: 384 DALKKSLVGVQKYIQATDLSE 446
           D +K+ L G    IQATD +E
Sbjct: 114 DRIKQELDGFHYEIQATDPTE 134


>04_04_0752 -
           27791126-27791167,27791792-27791863,27792771-27792855,
           27792971-27793236,27794117-27794301,27794925-27795018,
           27795193-27795284,27795401-27795539,27796101-27796385
          Length = 419

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 230
           ASG+ V D CK  ++E+K  +  R++ F I +  +Q+ V+ +G+    Y+ F   +    
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325

Query: 231 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 410
             ECRY +FDF++      T E  +K K+F +SW PDT+KV+ KMLY+SS D  K+ L G
Sbjct: 326 ASECRYAVFDFDFV-----TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDG 380

Query: 411 VQ 416
           +Q
Sbjct: 381 IQ 382


>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
          Length = 153

 Score = 79.0 bits (186), Expect = 4e-15
 Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
 Frame = +3

Query: 63  VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 239
           + V +  K+ + E+K+ K HRYV+F I D ++ I VE  G     Y+ F   L      +
Sbjct: 20  IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76

Query: 240 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK 419
           CRY ++D ++      + +  +K K+F +SW P  ++++ K +Y+ S +  +  L GV  
Sbjct: 77  CRYAVYDLDFV-----SDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHF 131

Query: 420 YIQATDLSEASHEAVEXKLRAT 485
            IQATD  +   E +  +   T
Sbjct: 132 EIQATDPDDMDLEVLRGRANRT 153


>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
          Length = 169

 Score = 57.6 bits (133), Expect = 9e-09
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
 Frame = +3

Query: 63  VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 239
           + V +  K+ + E+ + K HRYV+F I D ++ I VE  G     Y+ F   L      +
Sbjct: 40  IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP----AD 95

Query: 240 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK 419
             Y L DF     C       +K K+F +SW P  + ++ K +Y+   +  +  L GV  
Sbjct: 96  AVYDL-DFVSDDNC-------RKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHF 147

Query: 420 YIQATDLSEASHEAVEXKLRAT 485
            IQATD  +   E +  +   T
Sbjct: 148 EIQATDPDDMDLEVLRGRANRT 169


>12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665
          Length = 366

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 22/54 (40%), Positives = 27/54 (50%)
 Frame = -2

Query: 483 WRGAXLRRPHETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTTTS 322
           WR + LRRP   LPR R L C S++   + S             P+RCP TTTS
Sbjct: 225 WRSS-LRRP---LPR-RHL-CVSDIGIDSASISSFSPAHLRLDHPFRCPATTTS 272


>09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,
            2509852-2511564,2512335-2512424,2512533-2512801,
            2513118-2513687,2513703-2514065
          Length = 1094

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
 Frame = +3

Query: 201  QFLEDLQKGGTG-ECRYGL-FDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 374
            +F+ +++ G  G E  + +  DF    Q +  +EA+     FL+ +  + +  + + L+ 
Sbjct: 778  EFISEIKMGLHGYEMEFNMNLDFWSIIQKEAIAEAASNINSFLLKYSEENSCAEAQSLHM 837

Query: 375  SSFDALKKSLVGVQKYIQATD--LSEASHEAVEXKLRATDRQ*TAFTHELATKPNPLSD 545
               D LK ++      I+  +  LS+   +A+E  L     +  +   ++A + + +SD
Sbjct: 838  QEMDKLKLNVDTFNLVIREKEEYLSQIEFKAIEDHLDFLRHELDSLRGKVAKQDSGISD 896


>03_05_1112 +
           30488678-30488806,30489047-30489228,30489310-30489505,
           30490095-30491117
          Length = 509

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 90  TYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTG 236
           T +++ +D+    +  ++  EK  D E + E NA YE+ +  L+  G G
Sbjct: 140 TKQKVAEDENRNLIDRWML-EKMKDAERLNEANAMYEEMVLKLKSAGVG 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,378,882
Number of Sequences: 37544
Number of extensions: 332102
Number of successful extensions: 1076
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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