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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d07
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0335 - 2706916-2706984,2707062-2707825,2710014-2710053,271...   128   3e-30
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873...    35   0.070
07_01_0442 - 3348638-3349126,3349978-3350322                           34   0.093
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094...    33   0.28 
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784...    30   1.5  
05_05_0121 + 22525782-22525998,22526526-22526609,22526797-225268...    29   2.6  
01_06_1275 - 35910992-35911342,35912157-35912390,35912573-359126...    29   2.6  
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185...    29   3.5  
12_01_0513 + 4059586-4059620,4060155-4060365,4060470-4060724,406...    29   4.6  
09_04_0484 + 17990020-17990488,17990930-17991009,17991122-179915...    29   4.6  
02_05_0891 - 32554355-32555305                                         29   4.6  
09_04_0483 + 17979566-17980019,17980242-17980321,17980431-179808...    28   6.1  
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639...    28   6.1  
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857...    28   6.1  
05_03_0483 + 14585581-14587977                                         28   8.1  

>01_01_0335 -
           2706916-2706984,2707062-2707825,2710014-2710053,
           2710105-2710173,2710268-2710336
          Length = 336

 Score =  128 bits (310), Expect = 3e-30
 Identities = 72/177 (40%), Positives = 96/177 (54%), Gaps = 12/177 (6%)
 Frame = +2

Query: 176 GKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAK-GKTLKDEDTLNSLNIQD---- 340
           G +   G++ + ++++ I    KK  YP RQ L L  + GK+ K        ++ +    
Sbjct: 39  GGLRSRGKAKVADLQDAIYAKTKK-YYPARQRLTLPIQPGKSGKPVVLSAKASLSEYCEK 97

Query: 341 --GS-KLFLKDLGPQVSWRNVFLAEYAGPLFVYLWVYQRPWILY----GTQTSSPEQVAT 499
             GS  +  KDLGPQV +  +F  EY GPL +Y   Y  P   Y    G +   P Q  T
Sbjct: 98  GSGSLTVVFKDLGPQVFYSTLFFFEYLGPLLIYPMFYYLPVYKYFGYEGERVMHPVQ--T 155

Query: 500 VAAICWSAHYAKRLFETLFIHRFSHGTMPLKNLFRNCAYYWLFALYVAYHVNHPLYT 670
            A   W  HY KR+ ET F+HRFSH T P+ N+FRNCAYYW F  Y+AY+ NHPLYT
Sbjct: 156 YAMYYWCFHYFKRIMETFFVHRFSHATSPVSNVFRNCAYYWTFGAYIAYYCNHPLYT 212


>06_01_1069 +
           8731567-8731632,8732120-8732281,8733028-8733081,
           8733557-8733630,8733706-8733786,8734902-8735079,
           8735336-8735506,8736113-8736202,8736284-8736331,
           8736447-8736562,8736655-8736733,8737101-8737223
          Length = 413

 Score = 34.7 bits (76), Expect = 0.070
 Identities = 18/60 (30%), Positives = 34/60 (56%)
 Frame = +2

Query: 179 KIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 358
           +I  + E+S+  VK  I+ +  +++YP  Q + +  +GK LKD+ TL    + + S L +
Sbjct: 14  EIEASPEASVAEVKRIIESTQGQNVYPADQQMLIH-QGKILKDDTTLEGNKVAENSFLVI 72


>07_01_0442 - 3348638-3349126,3349978-3350322
          Length = 277

 Score = 34.3 bits (75), Expect = 0.093
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 494 ATVAAICWSAHYAKRLFETLFIHRFSHGTMPLKNLFRNCAYYWLFALYVAY 646
           A V +   + H+ KR+ E LFIH++S G+MPL       + Y +    + Y
Sbjct: 98  AQVLSAALTVHFLKRILEVLFIHQYS-GSMPLNTAATISSSYLVITATMIY 147


>09_04_0070 +
           14308446-14308511,14308844-14309005,14309420-14309473,
           14310009-14310073,14310391-14310459,14310590-14310767,
           14311085-14311231,14311316-14311432,14311507-14311619,
           14311703-14311781,14311892-14312020
          Length = 392

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +2

Query: 179 KIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 358
           +I V     + +VK  I+ +  + +YP  Q + +  +GK LKD+ TL+   + + S L +
Sbjct: 14  QIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIH-QGKVLKDDTTLDENKVLENSFLVI 72


>01_05_0297 -
           20578031-20578080,20578162-20578236,20578317-20578416,
           20578476-20578535,20578833-20578907,20578989-20579069,
           20579596-20579665,20579769-20579833,20580008-20580116,
           20580812-20580876,20580964-20581023,20582008-20582134,
           20582215-20582315,20583209-20583316,20583429-20583464,
           20583569-20583714,20585555-20585564
          Length = 445

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +2

Query: 257 PDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFLKDLGPQVSWRNVFLAEYAGPLFV 427
           P+RQ  K+  KG  LKD+   ++L ++DG KL +     +     +  A   GP+FV
Sbjct: 39  PERQ--KIMVKGGILKDDADWSTLGVKDGQKLMMIGTADE-----IVKAPEKGPVFV 88


>05_05_0121 +
           22525782-22525998,22526526-22526609,22526797-22526820,
           22527118-22527233,22527691-22527936,22528176-22528256,
           22528666-22528782,22529139-22529492
          Length = 412

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 470 QTSSPEQVATVAAICWSAHYAKRLFETLFIHRF-SH 574
           Q++SPE +  +  +CW+ H A R  +T+  + F SH
Sbjct: 318 QSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSH 353


>01_06_1275 -
           35910992-35911342,35912157-35912390,35912573-35912653,
           35913162-35913407,35913502-35913617,35914813-35915032
          Length = 415

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 470 QTSSPEQVATVAAICWSAHYAKRLFETLFIHRF-SH 574
           Q++SPE +  +  +CW+ H A R  +T+  + F SH
Sbjct: 322 QSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSH 357


>05_03_0633 +
           16416913-16417009,16417976-16418060,16418398-16418551,
           16418808-16419023,16419105-16419241,16419317-16419408,
           16419622-16419804,16421722-16421819,16422021-16422070,
           16424605-16424756,16424944-16425069,16426315-16426523
          Length = 532

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -3

Query: 470 VYHIKSTVFDTPTSKQRVVQHIQLKTHSAKILEVQDLLKKAWIRL 336
           V HIK TV   P+  QRV  H   +    K +E  +   KAW+ L
Sbjct: 264 VAHIKFTVLLLPSGSQRVTSHSLQELQPTKSIE-DNAEIKAWLAL 307


>12_01_0513 +
           4059586-4059620,4060155-4060365,4060470-4060724,
           4060801-4060865,4061120-4061194,4061440-4061575,
           4061661-4061753,4061838-4061983,4062074-4062174,
           4062259-4062434,4063823-4063900,4063991-4064199,
           4064286-4064378,4064888-4064971,4065405-4065506,
           4065591-4065678,4065756-4065809,4065869-4066075,
           4066970-4067026,4067171-4067225,4067737-4067813,
           4067941-4068007,4068383-4068444,4068541-4068603,
           4068702-4068830
          Length = 905

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 650 HDKPHRGQTTNNMHSF*TSSSMASYHVKSDE 558
           HDKP RG+TT+   S  +S   +S+H ++ E
Sbjct: 81  HDKPSRGETTSISWSGNSSYLASSFHPRATE 111


>09_04_0484 +
           17990020-17990488,17990930-17991009,17991122-17991586,
           17994670-17994756,17994887-17995018,17995102-17995293,
           17995409-17995495,17995621-17996295
          Length = 728

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/18 (61%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
 Frame = +2

Query: 593 NLFRNCAYYWL-FALYVA 643
           N++R+  YYWL FA+YVA
Sbjct: 438 NMYRDLGYYWLRFAIYVA 455


>02_05_0891 - 32554355-32555305
          Length = 316

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 464 GTQTSSPEQVATVAAICWSAHYAKRLFETLFIHRFSHGTMP 586
           G + SSP++ A      WS     R+ E L  HR  HG++P
Sbjct: 124 GPKVSSPKRQAFHRI--WSTEDEVRILEALAAHRREHGSLP 162


>09_04_0483 +
           17979566-17980019,17980242-17980321,17980431-17980895,
           17981460-17981597,17982574-17982660,17982781-17982909,
           17983034-17983225,17983393-17983479,17983707-17984378
          Length = 767

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/18 (55%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
 Frame = +2

Query: 593 NLFRNCAYYWL-FALYVA 643
           N++R+  YYWL FA+Y+A
Sbjct: 478 NMYRDLGYYWLRFAIYIA 495


>08_02_0067 -
           11863092-11863104,11863432-11863547,11863610-11863950,
           11864978-11865331,11866055-11866150,11866812-11866980,
           11867541-11867618,11867745-11867926,11868010-11868094,
           11868545-11868648,11869510-11869590,11870123-11870240,
           11871299-11871430,11871635-11871788,11871838-11871917
          Length = 700

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 20/75 (26%), Positives = 41/75 (54%)
 Frame = +2

Query: 134 MEIEILSVSSAKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDED 313
           +EI+I ++ S      + V     +  +KEKI  +    +  ++Q  +L  +G+ LKD++
Sbjct: 103 IEIKIKTLDSQTY--NLRVNKRVPVPLLKEKI--ATVTGILSEQQ--RLICRGRVLKDDE 156

Query: 314 TLNSLNIQDGSKLFL 358
            L++ +++DG  L L
Sbjct: 157 LLSAYHVEDGHTLHL 171


>05_03_0115 -
           8544590-8544958,8545408-8545503,8561954-8562505,
           8576247-8576312,8576623-8576694,8576967-8577082,
           8577743-8577838,8578498-8578765
          Length = 544

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = +2

Query: 242 KKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 358
           K+ + PD+Q  +L   GK LKD  TL   NIQ  S L L
Sbjct: 424 KEGIPPDQQ--RLIFAGKQLKDGRTLADYNIQKESTLHL 460


>05_03_0483 + 14585581-14587977
          Length = 798

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -3

Query: 674 EQCIGDGSHDKPHRGQTTNNMHSF*TSSSMASYHVK-SDE*TKFQTT 537
           EQC+ D S D+P  G    N+         A  + K S+E T  +TT
Sbjct: 716 EQCVADRSIDRPEMGDVLRNLEVALKMQECAENNSKFSEETTSSKTT 762


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,702,903
Number of Sequences: 37544
Number of extensions: 356771
Number of successful extensions: 863
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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