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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0131
         (680 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029...    32   0.37 
07_03_1747 + 29188568-29188715,29188793-29189541                       31   1.1  
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321...    30   1.5  
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305...    29   2.6  
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707...    28   6.0  
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198...    28   6.0  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    28   6.0  
08_02_0813 + 21459776-21461128                                         28   7.9  
07_03_1400 + 26287124-26287298,26287925-26288007,26288141-262882...    28   7.9  
07_01_0602 + 4485753-4486751                                           28   7.9  
05_02_0124 + 6849034-6851502                                           28   7.9  
04_03_0736 - 19145428-19145474,19145608-19145721,19146707-191478...    28   7.9  
01_06_1147 + 34892415-34893702,34894051-34894676                       28   7.9  

>05_03_0366 -
           13102147-13102281,13102560-13102739,13102791-13102992,
           13104385-13104575
          Length = 235

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -1

Query: 251 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 87
           H P AAA  P VP++    P  L +     GG GL   S S +  G  + D G+GG
Sbjct: 7   HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61


>07_03_1747 + 29188568-29188715,29188793-29189541
          Length = 298

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +1

Query: 304 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 456
           PPP TT++  V L TA +   S   +  QF+C+     TTC  + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260


>11_06_0411 -
           23230580-23230795,23231407-23231862,23232142-23232195,
           23232251-23232367
          Length = 280

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +2

Query: 149 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 265
           V+ H  +  R S EL+RQ  ELER+G  L+   G L  +
Sbjct: 89  VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127


>08_02_1291 +
           25930056-25930067,25930289-25930334,25930434-25930546,
           25930645-25930930,25931357-25931421,25931642-25931693,
           25931774-25931883,25932611-25932641,25932853-25933004,
           25934622-25934840
          Length = 361

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 164 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 75
           +GG  L    ++Q  G   Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129


>07_03_0809 -
           21669632-21669637,21669871-21670131,21670573-21670752,
           21671458-21672819
          Length = 602

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 36  SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 191
           +L   +D L+  YD+  PPDS+ V        HA      + +R+L  + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209


>02_01_0296 +
           1978565-1981197,1981216-1981639,1982280-1982771,
           1982950-1983087
          Length = 1228

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 333 GRGERSPRRWLQPRLAVPRQASTSVPRTP 247
           GRG RS  R L+P LA+   A + +P  P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -1

Query: 278 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 111
           ++PP     H   + AP P +P+ S   P++  +   PH        S +QM  Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606


>08_02_0813 + 21459776-21461128
          Length = 450

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 222 GEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 401
           G++ C  WL +  R   P   LL+   TT      R  V+      W K+  IS P+S++
Sbjct: 238 GDYRCPAWLSTDARRLIPR--LLDPNPTT------RISVAQLVETPWFKKTSISRPVSIE 289

Query: 402 L 404
           L
Sbjct: 290 L 290


>07_03_1400 +
           26287124-26287298,26287925-26288007,26288141-26288270,
           26288369-26288442,26288797-26288883,26288976-26289100,
           26289232-26289292,26289606-26289683,26289785-26289890,
           26289978-26290123,26290264-26290380
          Length = 393

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = +3

Query: 390 ISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 479
           ++++   W ND+++C F+  SR  +S+ M+
Sbjct: 83  VNLEGGGWCNDVKSCVFRKSSRRGSSNHME 112


>07_01_0602 + 4485753-4486751
          Length = 332

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/16 (68%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = +1

Query: 601 RCLSGDAPRH-TRWRP 645
           RCL+GD PRH  RW P
Sbjct: 69  RCLTGDRPRHWLRWLP 84


>05_02_0124 + 6849034-6851502
          Length = 822

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 600 GTLPRELPPRHGPGSAPHWTDPSHPTLL 517
           G LPR+ PP   P S P+ T P +P  L
Sbjct: 10  GKLPRQPPPPPPPPSPPNSTFPRYPKSL 37


>04_03_0736 -
           19145428-19145474,19145608-19145721,19146707-19147870,
           19150251-19150383
          Length = 485

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/16 (68%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = +1

Query: 601 RCLSGDAPRH-TRWRP 645
           RCL+GD PRH  RW P
Sbjct: 313 RCLTGDRPRHWLRWLP 328


>01_06_1147 + 34892415-34893702,34894051-34894676
          Length = 637

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 253 PRNACGGLTWYC*TRLQPPPGTTLSAPVYLITAPSPG 363
           P N+  G  + C   LQP PGT  S P    T+PSPG
Sbjct: 210 PANSFLGNAFLCGFPLQPCPGTAPS-PSPSPTSPSPG 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,380,349
Number of Sequences: 37544
Number of extensions: 533245
Number of successful extensions: 1872
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1869
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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