Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40089
(828 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 172 3e-43
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 136 2e-32
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 132 3e-31
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 4e-29
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 81 1e-15
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 79 4e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 36 0.040
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 36 0.040
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 32 0.65
SB_41346| Best HMM Match : Ion_trans (HMM E-Value=0) 29 3.5
SB_23997| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0) 29 6.1
SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3) 29 6.1
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 172 bits (419), Expect = 3e-43
Identities = 93/172 (54%), Positives = 103/172 (59%)
Frame = +1
Query: 247 GYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 426
G YSCVGV+KNGRVEIIANDQGNRITPSYVAFT++GERLIGD AKNQLTTNPENTVFDA
Sbjct: 709 GTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDA 768
Query: 427 KRLIGREWSDQTVQHDVKFFPFKVVEKTANLMFKYKLHKATKYXXXXXXXXXXXXXXXXX 606
KRLIGR W D +VQ+D+KFFPFKVV+K + K+ K
Sbjct: 769 KRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKET 828
Query: 607 XXXXXXXXXXXXXXXXXXISMMLHVKQPKMLVQFLGLNVMRIINEPTAAAIA 762
+ K GL VMRIINEPTAAAIA
Sbjct: 829 AEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIA 880
Score = 117 bits (282), Expect = 1e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 504 KDSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQ 683
K+ KPHVQV+ K FA EEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDA RQ
Sbjct: 795 KNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQ 854
Query: 684 ATKDAGTISG 713
ATKDAG I+G
Sbjct: 855 ATKDAGAIAG 864
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 136 bits (330), Expect = 2e-32
Identities = 77/174 (44%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Frame = +1
Query: 247 GYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 426
G YSCVGV++NG+VEIIANDQGNR TPSYV FT D ERL+GDAAKNQ+ NPENT+FDA
Sbjct: 12 GTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFT-DTERLVGDAAKNQVALNPENTIFDA 70
Query: 427 KRLIGREWSDQTVQHDVKFFPFKVV--EKTANLMFKYKLHKATKYXXXXXXXXXXXXXXX 600
KRLIGR + D TVQ D+K +PFK++ + +YK + T
Sbjct: 71 KRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKET 130
Query: 601 XXXXXXXXXXXXXXXXXXXXISMMLHVKQPKMLVQFLGLNVMRIINEPTAAAIA 762
+ + L NV+R+INEPTAAA+A
Sbjct: 131 AEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGL--NVLRVINEPTAAALA 182
Score = 102 bits (244), Expect = 4e-22
Identities = 49/69 (71%), Positives = 58/69 (84%)
Frame = +3
Query: 507 DSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQA 686
++KP +QV+ K FA EEIS+MVL KMKETAEAYLG+KVT AV+TVPAYFND+ RQA
Sbjct: 98 NNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQA 157
Query: 687 TKDAGTISG 713
TKDAGTI+G
Sbjct: 158 TKDAGTIAG 166
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 132 bits (319), Expect = 3e-31
Identities = 77/172 (44%), Positives = 93/172 (54%)
Frame = +1
Query: 247 GYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 426
G YSCVGV+++G+VEIIANDQGNR TPSYVAF+ D ERLIGDAAKNQ+ NPENTVFDA
Sbjct: 12 GTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFS-DTERLIGDAAKNQVAMNPENTVFDA 70
Query: 427 KRLIGREWSDQTVQHDVKFFPFKVVEKTANLMFKYKLHKATKYXXXXXXXXXXXXXXXXX 606
KRLIGR++ D V D+ +PF V+ + + + K
Sbjct: 71 KRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKET 130
Query: 607 XXXXXXXXXXXXXXXXXXISMMLHVKQPKMLVQFLGLNVMRIINEPTAAAIA 762
+ K GLNV+RIINEPTAAAIA
Sbjct: 131 AEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIA 182
Score = 101 bits (241), Expect = 9e-22
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +3
Query: 513 KPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATK 692
+P +QV+ K F PEEIS+MVLTKMKETAEAYLG KVT AVVTVPAYF+D+ RQATK
Sbjct: 100 RPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK 159
Query: 693 DAGTISG 713
DAGTI+G
Sbjct: 160 DAGTIAG 166
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 125 bits (302), Expect = 4e-29
Identities = 61/102 (59%), Positives = 75/102 (73%)
Frame = +1
Query: 247 GYHYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 426
G YSCVGV+++G+VEIIANDQGNR TPSYVAFT D ERL+GDAAKNQ+ NP NT+FDA
Sbjct: 12 GTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DEERLVGDAAKNQVAMNPTNTIFDA 70
Query: 427 KRLIGREWSDQTVQHDVKFFPFKVVEKTANLMFKYKLHKATK 552
KRLIGR + D V+ D+K + F+VV + K + TK
Sbjct: 71 KRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETK 112
Score = 90.2 bits (214), Expect = 2e-18
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 513 KPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATK 692
+P V+V+ K F EEIS+MVL KMKETAEAYLG KVT AVVTVPAYFND+ RQATK
Sbjct: 125 RPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 184
Query: 693 DAG 701
DAG
Sbjct: 185 DAG 187
Score = 84.6 bits (200), Expect = 9e-17
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +3
Query: 567 EISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATKDAGTISG 713
+IS+MVL KMKETAEAYLG KVT AVVTVPAYFND+ RQATKDAG ISG
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISG 259
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 712 GLNVMRIINEPTAAAIA 762
GLNV+RIINEPTAAAIA
Sbjct: 259 GLNVLRIINEPTAAAIA 275
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 81.0 bits (191), Expect = 1e-15
Identities = 38/64 (59%), Positives = 50/64 (78%)
Frame = +3
Query: 522 VQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATKDAG 701
+ V+ + FAPE+ISA+VL ++K AEA+LG+ V AV+TVPA+FNDA RQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 702 TISG 713
TI+G
Sbjct: 62 TIAG 65
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 721 VMRIINEPTAAAIAMA*QEGR 783
V+RIINEPTAAAIA + R
Sbjct: 92 VLRIINEPTAAAIAYGLDKAR 112
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 79.0 bits (186), Expect = 4e-15
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Frame = +1
Query: 247 GYHYSCVGVYK--NGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVF 420
G YSCVG Y+ +GR++I +++ +++ PS VAFT G L+G+ A +Q NP+NT++
Sbjct: 39 GTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGV-LVGEKALSQAEINPKNTIY 97
Query: 421 DAKRLIGREWSDQTVQHDVKFFPFKV-VEKTANLMFKYKLHKATKYXXXXXXXXXXXXXX 597
DAKR IG+ ++ Q + K + F+V +K N F + K +
Sbjct: 98 DAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGF--LVGKKGNF-TVITPEEIGGYVI 154
Query: 598 XXXXXXXXXXXXXXXXXXXXXISMMLHVKQPKMLVQ---FLGLNVMRIINEPTAAAIA 762
+ +KQ V+ G+ V+R+INEPTAAA+A
Sbjct: 155 KKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALA 212
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +3
Query: 552 VFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATKDAGTISG 713
V PEEI V+ K++ AE L VT AV++VPA F+ R AT A +++G
Sbjct: 143 VITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAG 196
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +3
Query: 522 VQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQATKDAG 701
+QVQ +VF+PE++ AM+ T++K TAE L KVT V++VP+Y+ D R+ DA
Sbjct: 160 IQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDAS 219
Query: 702 TISGS*C 722
+G C
Sbjct: 220 ATAGLNC 226
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 391 LTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVE 504
+ +N +NT+ KR IGR++SD VQ ++ P+KVVE
Sbjct: 115 MISNLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVE 152
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 259 SC-VGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQ 390
SC + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 12 SCYIAVARGGGIETVANEFSDRCTPSFVSL-GDKQRLIGTSGKNQ 55
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +3
Query: 504 KDSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAPRQ 683
K PHV+ Q D F PEE+ M+L + E + + V+TVP +FN A R+
Sbjct: 64 KLDNPHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERR 122
Query: 684 ATKDAGTISG 713
A A + G
Sbjct: 123 ALLRAAELVG 132
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 35.9 bits (79), Expect = 0.040
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 280 NGRVEIIANDQGNRITPSYVAFTQDGERLI 369
+G IIAND G+R+TP+ VAF+ D E+LI
Sbjct: 82 DGNTTIIANDAGDRVTPAMVAFS-DTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 35.9 bits (79), Expect = 0.040
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 292 EIIANDQGNRITPSYVAFTQDGERL 366
++I N +G+R TPS VAFT +GERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 31.9 bits (69), Expect = 0.65
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 265 VGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 426
V Y N +V + A D G+++T Y A T +G+ L+ A + +T N + V A
Sbjct: 728 VSDYHNRKVHVFARDDGSQVT-CYTAVTDEGDGLLN--APSGITVNSKGEVIVA 778
>SB_41346| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1264
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 467 CTVWSLHSRPIRRLASKTVFSGLVVSWFLAASPI 366
C VW + +RRL VF G+++ + +AAS I
Sbjct: 387 CAVWKVMRYKVRRLVEHKVFEGIIL-FLIAASSI 419
>SB_23997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 465
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 445 EWSDQTVQHDVKFFPFKVVEKTANLMFKYK 534
E+ D + D+KF +++EKT L+ KYK
Sbjct: 353 EFPDMPINIDIKFNSDELIEKTNELILKYK 382
>SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 628
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 370 GDAAKNQLTTNP-ENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKTANLMFKYKL 537
G A+ +LT P EN D L+ WS + +K K+ E AN+ K++L
Sbjct: 70 GAPARLRLTVRPAENYPVDLYYLMDMSWSMRDDLSKLKGLAGKIAESMANITTKFRL 126
>SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3)
Length = 787
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 449 HSRPIRRLASKTVFSGLVVSWF 384
H I RL+S+ VFSG V+ WF
Sbjct: 114 HKILIDRLSSRFVFSGTVIQWF 135
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,774,613
Number of Sequences: 59808
Number of extensions: 522704
Number of successful extensions: 1366
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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