Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10454
(824 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 84 2e-16
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 67 1e-11
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 42 5e-04
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 31 0.86
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 31 1.1
SB_22760| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 29 4.6
SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 29 4.6
SB_42433| Best HMM Match : zf-CW (HMM E-Value=2.4) 29 6.1
SB_14677| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 83.8 bits (198), Expect = 2e-16
Identities = 39/83 (46%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Frame = +3
Query: 228 YRH--CGNLL-HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH C + +E ++G A+ + + EG VKRE+LFVT+KLW +H + VLPA + +LKN
Sbjct: 79 YRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLWCDSHHPDDVLPACQATLKN 138
Query: 399 LDLDYVNLYLIHWPIALHENASI 467
L LDY++LYLIH P+A + +
Sbjct: 139 LQLDYLDLYLIHIPVAFKKGVRL 161
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/68 (30%), Positives = 42/68 (61%)
Frame = +2
Query: 470 PNRLRGDVASYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSAL 649
P ++ + + ++ +GL K+IGVSNF++++L +L + P+ QVE++ L Q L
Sbjct: 174 PEGVQNTWQAMEGLVAKGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKL 233
Query: 650 LDYCKAQG 673
++C ++G
Sbjct: 234 KEFCDSKG 241
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 178 DEVQKSVEWAIDAGYRHIDTAAIY 249
+EV +V AI+ GYRHID A IY
Sbjct: 65 EEVGNAVRLAIELGYRHIDCAEIY 88
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 653 DYCKAQGIVVVAYTPFGNLFNRQPSAPAPRADDQRLVPSPKNTRKPFRK 799
D+C ++GI++ AY+P GN P P+ +RL PK +P K
Sbjct: 283 DFCDSKGILLTAYSPLGN-----PGRLVPK---ERLEREPKVMEEPVIK 323
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 72.9 bits (171), Expect = 3e-13
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = +3
Query: 228 YRH--CGNLL-HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH C +E +VG A+++ + VV+R+DLF+T+KLWNT H + V SLK+
Sbjct: 39 YRHIDCAYAYRNEKEVGDALRELLGS-VVERKDLFITSKLWNTKHNPKDVRSNCVDSLKD 97
Query: 399 LDLDYVNLYLIHWPIALHE 455
L LDY++LYLIHWP++ +
Sbjct: 98 LGLDYLDLYLIHWPLSFRD 116
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/90 (32%), Positives = 53/90 (58%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVV 682
++++++GL K+IG+SNFN +Q++ + + + P QVE + L Q+ L+D+ K I
Sbjct: 144 EKLVDEGLVKAIGLSNFNSKQVDDICAIARIKPVANQVECHPLLNQAKLIDHHKKHNIQT 203
Query: 683 VAYTPFGNLFNRQPSAPAPRADDQRLVPSP 772
+AY+P G+L P + DD ++ P
Sbjct: 204 IAYSPLGSL-----DRPWAKPDDPHVMRDP 228
Score = 48.4 bits (110), Expect = 7e-06
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +1
Query: 97 LKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
+KLNNG E+P G+GTW + K +V+ +V++AI GYRHID A Y
Sbjct: 4 VKLNNGLEMPVLGLGTW------KSKPGQVENAVKFAIKEGYRHIDCAYAY 48
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2
Query: 515 NQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYT 694
++GL +SIGVSNFNIQ LE L+ + GV P+V Q+E++ LQ L YCK I + A++
Sbjct: 186 SRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHPFLQMKELTQYCKRHNITIQAFS 245
Query: 695 P 697
P
Sbjct: 246 P 246
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
+E VG A++ + R +++V TK++ T H + + A KSL L L YV+LYLI
Sbjct: 111 NEQSVGEAVRCSN----IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLI 166
Query: 432 HWPI 443
H+P+
Sbjct: 167 HFPV 170
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/49 (34%), Positives = 33/49 (67%)
Frame = +1
Query: 103 LNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
+N+G++IP G+G ++++ +++V WA+++GYR IDTA+ Y
Sbjct: 70 MNDGRKIPLLGLG------AHDIHS---KQAVLWALESGYRLIDTASRY 109
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 64.5 bits (150), Expect = 1e-10
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +2
Query: 491 VASYDRVLN---QGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYC 661
+A+YD +L +GL +S+GVSNF + LE L+ G TP++ Q+EIN +Q ++ YC
Sbjct: 133 IAAYDALLTLKEEGLIRSVGVSNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEIIKYC 192
Query: 662 KAQGIVVVAYTP 697
GI V Y P
Sbjct: 193 NKHGITVEGYAP 204
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
+E +VG A++K +KRED++VTTKL + L ++S+K LD+ YV+L+LI
Sbjct: 69 NEKEVGSAVRKS----GLKREDIYVTTKLKPSEEGHSNALKYAKESIKKLDIGYVDLFLI 124
Query: 432 HWP 440
H P
Sbjct: 125 HTP 127
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 276 IKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLIH 434
+ K IA+ + R+D+F+ TKL E L ++ SL+ L DY++L+LIH
Sbjct: 379 VAKAIADSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH 431
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 518 QGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTP 697
QG +S+GVSNFN+ +L+ L + V S +Q + Q +C GI + Y+
Sbjct: 464 QGKIRSLGVSNFNVDELQELVNFATVPVSAVQNWFDPFHQDRKARRFCNKHGIRYIGYST 523
Query: 698 FG 703
G
Sbjct: 524 LG 525
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +1
Query: 103 LNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTRTRSDVPLR 282
L++G +IP FG+G + +L +++V WA++ GYR IDTAA Y+ R LR
Sbjct: 3 LSDGYKIPRFGLGLY------DLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR 56
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 31.5 bits (68), Expect = 0.86
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 315 DLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLIHW 437
+L +K+ N + ++ + KSL+ L +D ++LYL+HW
Sbjct: 27 ELGTLSKVRPENASEMKMMLSCEKSLERLGIDRIDLYLLHW 67
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 344 HEPQEG-GGFAGPQEIIEEFGFGLRESIFNSLADRSARKRLNFPNRLR-GDVASYDRVLN 517
++P G G + G Q+ GFG R S +NS A + + RLN R+R +A Y+R +
Sbjct: 1245 NKPYSGYGHYTGYQQ---STGFGFRPSPYNSAAYLAYKNRLNTMMRVRAARIAEYNRYIE 1301
Query: 518 Q 520
+
Sbjct: 1302 R 1302
>SB_22760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 570
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 743 PAALEPTAGG*TDCRRGCTPPQLSLEPC 660
PA L+ T+G DC+R CT P L C
Sbjct: 189 PAQLKNTSGTTPDCKRACTKPYEFLTNC 216
>SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4538
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +2
Query: 485 GDVASYDRVLNQGLT----------KSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNL 634
GD +SY+ V+ +G+ S+GV N N+Q R+ S+ T + ++ I+ N+
Sbjct: 1704 GDKSSYNIVVGEGVRPYVKVIEHIYSSLGVFNINLQASNRVSSKSIATTMITEIPISANI 1763
Query: 635 QQSALLDY 658
L Y
Sbjct: 1764 TFKTLGRY 1771
>SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 609
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 583 RLEPLQLLNVEVGHPNGLGQTLVQDSVIACHVST*SVWEIEAFSCRA 443
R E L + VGH +G + V D C VS S W + + SC A
Sbjct: 140 RAEYLPIELPSVGHVASVGMSRVSDDGNPCKVSDWSKWSVCSQSCGA 186
>SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 366
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 583 RLEPLQLLNVEVGHPNGLGQTLVQDSVIACHVST*SVWEIEAFSCRA 443
R E L + VGH +G + V D C VS S W + + SC A
Sbjct: 140 RAEYLPIELPSVGHVASVGMSRVSDDGNPCKVSDWSKWSVCSQSCGA 186
>SB_42433| Best HMM Match : zf-CW (HMM E-Value=2.4)
Length = 252
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 708 CSTASRRLQRRGPTTSVSCHR--PKIQENRSANRTQI 812
C+ A +RRGP TS+ C P +EN N Q+
Sbjct: 151 CAGAREECRRRGPWTSIQCRLCWPPREENACKNSEQM 187
>SB_14677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 28.3 bits (60), Expect = 8.0
Identities = 27/104 (25%), Positives = 44/104 (42%)
Frame = +2
Query: 410 LRESIFNSLADRSARKRLNFPNRLRGDVASYDRVLNQGLTKSIGVSNFNIQQLERLKSEG 589
+R+S N L R+RL NR ++D+ L + S ++Q+ L
Sbjct: 35 IRDSFINGLNSPFIRQRL-LENRELDLKTAFDQANALDLAQKNSDSYSCLEQIFTLCG-- 91
Query: 590 GVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTPFGNLFNRQ 721
TPS + + +L L +Y A+GI TP+ + N Q
Sbjct: 92 --TPSYIHSDRGASLISQELKEYLSARGIASSRTTPYHPIGNSQ 133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,222,687
Number of Sequences: 59808
Number of extensions: 594977
Number of successful extensions: 2089
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2084
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2311562737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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