Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10453
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 199 1e-51
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 199 1e-51
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 195 2e-50
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 134 6e-32
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 134 6e-32
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 116 2e-26
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 85 6e-17
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 59 3e-09
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 59 4e-09
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 58 5e-09
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 58 5e-09
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 58 5e-09
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 58 5e-09
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 56 2e-08
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 53 2e-07
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 52 3e-07
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 50 1e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 43 2e-04
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 43 2e-04
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 40 0.002
SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3) 33 0.15
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 31 1.1
SB_46180| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012) 28 5.8
SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22) 28 5.8
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 28 7.7
SB_33103| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_42833| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05) 28 7.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 199 bits (486), Expect = 1e-51
Identities = 94/131 (71%), Positives = 107/131 (81%)
Frame = +3
Query: 255 CDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLK 434
CDPRHGRYLTVAA+FRGRMSMKEVDEQML++QNKNSS+FVEWIPNNVKTAVCDIPP+GLK
Sbjct: 303 CDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLK 362
Query: 435 MSSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEY 614
MS+TFIGN+TAIQELFKRISEQF+A K T+ + NDLVSEY
Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
Query: 615 QQYQEATAEDD 647
QQYQ+ATAE++
Sbjct: 423 QQYQDATAEEE 433
Score = 102 bits (244), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL QQMFDAKNMM
Sbjct: 252 KLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRK
Sbjct: 220 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 199 bits (486), Expect = 1e-51
Identities = 94/131 (71%), Positives = 107/131 (81%)
Frame = +3
Query: 255 CDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLK 434
CDPRHGRYLTVAA+FRGRMSMKEVDEQML++QNKNSS+FVEWIPNNVKTAVCDIPP+GLK
Sbjct: 303 CDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLK 362
Query: 435 MSSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEY 614
MS+TFIGN+TAIQELFKRISEQF+A K T+ + NDLVSEY
Sbjct: 363 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
Query: 615 QQYQEATAEDD 647
QQYQ+ATAE++
Sbjct: 423 QQYQDATAEEE 433
Score = 102 bits (244), Expect = 3e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL QQMFDAKNMM
Sbjct: 252 KLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRK
Sbjct: 220 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 195 bits (476), Expect = 2e-50
Identities = 92/131 (70%), Positives = 106/131 (80%)
Frame = +3
Query: 255 CDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLK 434
CDP HGRYLTVAA+FRGRMSMKE+DEQML++QNKNSS+FVEWIPNNVKTAVCDIPP+GLK
Sbjct: 248 CDPLHGRYLTVAAMFRGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLK 307
Query: 435 MSSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEY 614
MS+TFIGN+TAIQELFKRISEQF+A K T+ + NDLVSEY
Sbjct: 308 MSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 367
Query: 615 QQYQEATAEDD 647
QQYQ+ATAE++
Sbjct: 368 QQYQDATAEEE 378
Score = 98.3 bits (234), Expect = 5e-21
Identities = 45/49 (91%), Positives = 47/49 (95%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVNMVPFPRL FFMPGFAPLTSRGSQQYRALTVPEL QQMFDAKNMM
Sbjct: 197 KLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 245
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRK
Sbjct: 165 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 197
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 134 bits (324), Expect = 6e-32
Identities = 64/111 (57%), Positives = 77/111 (69%)
Frame = +3
Query: 324 VDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQF 503
VDEQML+ QNKNS FFVEWIPNNVKT VCDI PKGLKM++TF+GN TAIQELFKR+ EQF
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 150
Query: 504 SACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQQYQEATAEDDNRV 656
+A K T+ + +DL++EYQQYQEA A+ + V
Sbjct: 151 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEADIEGEV 201
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 134 bits (324), Expect = 6e-32
Identities = 64/111 (57%), Positives = 77/111 (69%)
Frame = +3
Query: 324 VDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQF 503
VDEQML+ QNKNS FFVEWIPNNVKT VCDI PKGLKM++TF+GN TAIQELFKR+ EQF
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 212
Query: 504 SACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQQYQEATAEDDNRV 656
+A K T+ + +DL++EYQQYQEA A+ + V
Sbjct: 213 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEADIEGEV 263
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 118 MVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
MVPFPRLHFFMPGFAPL SR +QQY+ ++V EL QQMFDA+NMM
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMM 44
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 255 CDPRHGRYLTVAAIFRGRMSMKE 323
CDPRHGRYLTVAAIFRG+MSM+E
Sbjct: 47 CDPRHGRYLTVAAIFRGKMSMRE 69
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 116 bits (279), Expect = 2e-26
Identities = 58/130 (44%), Positives = 79/130 (60%)
Frame = +3
Query: 255 CDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLK 434
C+P+ G+YLT AA++RG MSMKEV++QM Q++ SS FV+WIPNN K AVCD+PP +K
Sbjct: 208 CNPKRGKYLTYAAMYRGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPHDMK 267
Query: 435 MSSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEY 614
MS++ I + TAIQELFKRI + + + DL+S Y
Sbjct: 268 MSASCISSNTAIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTY 327
Query: 615 QQYQEATAED 644
QQ ++ AED
Sbjct: 328 QQCEDMKAED 337
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVNM+P+PRLHFFMPGFAPLTSR YRALTV +L Q +FD KN++
Sbjct: 157 KLAVNMIPYPRLHFFMPGFAPLTSRECVSYRALTVADLTQAIFDNKNLL 205
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +2
Query: 11 TYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
TY DLNH++S TMSG+TTCLRFPGQLNADLRK
Sbjct: 126 TYSDLNHIISNTMSGLTTCLRFPGQLNADLRK 157
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 84.6 bits (200), Expect = 6e-17
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = +3
Query: 348 QNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSA 509
Q+ +SS FVEWIPNN+KTAVCD+PP GLK ++TF+ N+TAIQE F+R +EQF+A
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRRFTEQFAA 206
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESN 589
MFRR+AFLHWYT EGMD +EF E + N
Sbjct: 207 MFRRRAFLHWYTTEGMDPLEFTEIKRN 233
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQ 85
PTY +LN L++ TMSGVTT LRFPGQ
Sbjct: 128 PTYSELNSLIATTMSGVTTSLRFPGQ 153
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +3
Query: 594 NDLVSEYQQYQEATAEDD 647
NDL+SEYQQY++A ++DD
Sbjct: 264 NDLISEYQQYEDAKSDDD 281
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ +FRG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 289 KCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 348
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 349 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 380
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ +FRG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 720 KCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 779
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 780 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 811
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 383 MYAKRAFVHWYVGEGMEEGEFSEAREDL 410
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 814 MYAKRAFVHWYVGEGMEEGEFSEAREDL 841
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF M +AP+ S + +TV +L F+ N M
Sbjct: 674 NLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQM 718
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + LTV E+ F+ N M
Sbjct: 243 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITTSCFEPANQM 287
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 207 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 246
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCLLYRGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 363
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 364 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ N M
Sbjct: 258 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 675 KCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPPTVV 734
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 735 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 766
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF M +AP+ S + LTV ++ F+ N M
Sbjct: 629 NLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADITNSCFEPANQM 673
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 769 MYAKRAFVHWYVGEGMEEGEFSEAREDL 796
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 1178 MYAKRAFVHWYVGEGMEEGEFSEAREDL 1205
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+S +S +T LRF G LN DL ++++ P
Sbjct: 593 PTYTNLNRLISQLVSSITASLRFDGALNVDLTEFQTNLVP 632
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + LTV E+ F+ N M
Sbjct: 1062 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 1106
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 1026 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 1065
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +3
Query: 321 EVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGNTTAIQE 476
+V+ + +I+ K + FV+W P K + PP ++ + + NTTAI E
Sbjct: 1107 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 1166
Query: 477 LFKRISEQF 503
+ R+ +F
Sbjct: 1167 AWARLDHKF 1175
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQ 85
PTYGDLNHLVS TMSGVTTCLRFPGQ
Sbjct: 433 PTYGDLNHLVSATMSGVTTCLRFPGQ 458
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 241 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 300
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 301 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 332
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 335 MYAKRAFVHWYVGEGMEEGEFSEAREDL 362
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ N M
Sbjct: 195 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 239
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 159 PTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVP 198
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 363
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 364 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + LTV E+ F+ N M
Sbjct: 258 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 302
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 269 KCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 328
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 329 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 360
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 363 MYAKRAFVHWYVGEGMEEGEFSEAREDL 390
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF M +AP+ S + +TV +L F+ N M
Sbjct: 223 NLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQM 267
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 187 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 226
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 737 KCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 796
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 797 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 828
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 363
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTA+ E + R+ +F
Sbjct: 364 PGGDLAKVQRAVCMLSNTTAVAEAWARLDHKF 395
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 831 MYAKRAFVHWYVGEGMEEGEFSEAREDL 858
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + LTV E+ F+ N M
Sbjct: 691 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 735
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 655 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 694
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ N M
Sbjct: 258 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 889 KCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 948
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 949 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 980
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 368 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 424
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 983 MYAKRAFVHWYVGEGMEEGEFSEAREDL 1010
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 807 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 846
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ N M
Sbjct: 322 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 366
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ N M
Sbjct: 843 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 887
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 286 PTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVP 325
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 229 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 288
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 289 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 320
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 323 MYAKRAFVHWYVGEGMEEGEFSEAREDL 350
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ N M
Sbjct: 183 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 227
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 147 PTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVP 186
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 102 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 161
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + + NTTAI E + R+ +F
Sbjct: 162 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 193
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 196 MYAKRAFVHWYVGEGMEEGEFSEAREDL 223
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 20 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 59
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ N M
Sbjct: 56 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 100
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKG- 428
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + P
Sbjct: 102 KCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQQPTAV 161
Query: 429 -------LKMSSTFIGNTTAIQELFKRISEQF 503
++ S + NTTAI + + R++ +F
Sbjct: 162 PGGDLAKVQRSVCMLSNTTAIADAWARLNHKF 193
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 196 MYAKRAFVHWYVGEGMEEGEFSEAREDL 223
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 20 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 59
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + LTV ++ F+ N M
Sbjct: 56 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQM 100
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGL 431
+ DP+H YL A I RG + + ++ + + K S F+ W KT +C +PP G
Sbjct: 351 KADPKHNLYLACALILRGNVEVSDIRRNIERL--KPSLKFIHWNQEGWKTGLCSVPPVGQ 408
Query: 432 KMSSTFIGNTTAIQELFKRISEQF 503
S + N + I+ F + ++F
Sbjct: 409 PYSLLTLANNSCIKNTFVELKDRF 432
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPL 168
++ +N+VPFP+LH+ + PL
Sbjct: 301 EITMNLVPFPKLHYLVSSQTPL 322
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGL 431
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + P
Sbjct: 303 KCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIRHKAPGHF 362
Query: 432 KMSSTFIGNTTAIQE 476
++ + +QE
Sbjct: 363 SWATVYSTTRNYLQE 377
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 221 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 260
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + LTV ++ F+ N M
Sbjct: 257 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQM 301
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + F +W P K + PP
Sbjct: 229 KCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINSQPP 285
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 311 MYAKRAFVHWYVGEGMEEGEFSEAREDL 338
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + LTV E+ F+ N M
Sbjct: 183 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPANQM 227
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 147 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 186
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGL 431
+CDPR+G+Y+ ++RG + K+V+ + +I+ K + FV+W P K +I K
Sbjct: 435 KCDPRYGKYMACCLLYRGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFKCHP-NISDKQK 493
Query: 432 KMSSTFIGNT 461
K + TF T
Sbjct: 494 KSTKTFYSGT 503
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 550 MYAKRAFVHWYVGEGMEEGEFSEAREDL 577
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S VT LRF G LN DL ++++ P
Sbjct: 353 PTYTNLNRLIGQIVSSVTASLRFDGALNVDLTEFQTNLVP 392
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ + ++V E+ F+ N M
Sbjct: 389 NLVPYPRIHFPLATYAPVIGADKAYHENMSVAEITSACFEPSNQM 433
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 382 MYAKRAFVHWYVGEGMEEGEFSEAREDL 409
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
P+Y +LN L+ +S VT LRF G LN DL ++++ P
Sbjct: 212 PSYTNLNRLIGQIVSSVTASLRFDGSLNVDLNEFQTNLVP 251
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 216
N+VP+PR+HF + +AP+ S + LTV E+
Sbjct: 248 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEI 281
Score = 35.1 bits (77), Expect = 0.051
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Frame = +3
Query: 303 GRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIGN 458
G + +K+V+ + +I+ K + FV+W P K + PP ++ + + N
Sbjct: 305 GDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 364
Query: 459 TTAIQELFKRISEQF 503
TTAI E + R+ +F
Sbjct: 365 TTAIAEAWARLDHKF 379
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 96 MYAKRAFVHWYVGEGMEEGEFSEAREDL 123
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2
Query: 2 PNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 100
PNPT+ +N LVS M+ TT LR+PG +N DL
Sbjct: 257 PNPTFSQVNQLVSTIMATSTTTLRYPGYMNNDL 289
Score = 32.7 bits (71), Expect = 0.27
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTS 174
+++P PRLHF M G+ PLT+
Sbjct: 295 SLIPTPRLHFLMTGYTPLTT 314
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + LTV ++ FD N M
Sbjct: 1169 NLVPYPRIHFPLVTYAPVISPEKAYHEQLTVAQITNMCFDPNNQM 1213
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
P Y +LN L+ +S +T+ LRF G LN DL ++++ P
Sbjct: 1133 PGYANLNRLIGQIVSSITSSLRFDGALNVDLTEFQTNLVP 1172
Score = 33.5 bits (73), Expect = 0.15
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVD 329
+CDPRHG+Y+ ++RG + + ++D
Sbjct: 1215 KCDPRHGKYMACCMLYRGDVFIYQLD 1240
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 41.1 bits (92), Expect = 8e-04
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 512 FRRKAFLHWYTGEGMDEMEFNEAESNV 592
+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDL 39
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+ +S +T LRF G LN DL ++++ P
Sbjct: 97 PTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVP 136
>SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3)
Length = 861
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/76 (38%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -1
Query: 218 ASSGTVSARYC--WLPRDVSGAKPGMKKCRRGKGTMLTATCAGRRSAVRGTAGTSSRRTW 45
AS GT A C R ++GA G RG T G A RGT GT SR T
Sbjct: 257 ASRGTTGASRCITGASRGITGASRGTTGASRGT----TGASRGTTGASRGTTGT-SRGTT 311
Query: 44 SATPG--GSGRRTLGS 3
A+ G G+ R T G+
Sbjct: 312 GASRGTTGASRGTTGA 327
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 GMKKCRRGKGTMLTATCAGRRSAVRGTAGTSSRRTWSATPG--GSGRRTLGS 3
G+ RG + T G A RGT GT SR A+ G G+ R T G+
Sbjct: 165 GLLTTIRGSSQLFTGASRGTTGASRGTTGT-SRGITEASRGTTGTSRGTTGA 215
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Frame = +3
Query: 183 PAVPRAHRAGARAADVRRQEHDGRCDPRHGRYLT----VAAIFRGRMSM-KEVDEQMLSI 347
P + + R++ VRRQ +P H + + V+ + MS+ ++DE L +
Sbjct: 24 PVITSRNNPRTRSSGVRRQNLSSLANPPHKKAVRAAPGVSVLLANTMSIAPKIDEVRLVM 83
Query: 348 QNKNSS--FFVE-WIPNNVKTAVCDIP 419
+KN FF E W+ + + + DIP
Sbjct: 84 SDKNPDLFFFTETWLRDTISRNLLDIP 110
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +3
Query: 285 VAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTT 464
+ F+G +M + N S VEWI N ++ + ++ P G+ S T N
Sbjct: 173 IVDFFKGYPNMAHTGAARAGVHNLTMSLAVEWISNGIR--INNVAP-GVIFSETAAAN-Y 228
Query: 465 AIQELFKRISEQFSA 509
I +LF++I + A
Sbjct: 229 PIPDLFEKIRQTLPA 243
>SB_46180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/83 (26%), Positives = 31/83 (37%)
Frame = +3
Query: 261 PRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKMS 440
PR R L + R +KE DEQ + I+ K F + N T + P S
Sbjct: 13 PRQNRVLRKKSWTRLLKRLKEKDEQQIEIEKKEQGFSI--YVNGANTGIVGPPVTASPKS 70
Query: 441 STFIGNTTAIQELFKRISEQFSA 509
T +L + SE F +
Sbjct: 71 RCTSRQTKTAGKLSGKYSEDFES 93
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 28 PPGVADHVRRDDVPAVPRTAERRPAQVAVNMVPFPRLHFFMPGFAPLTSRGSQ 186
PP + + VP P RP+ + N PF R + PGF P +R Q
Sbjct: 407 PPTMIQTLPPPSVPPPPIGVPNRPSVLYPNNNPFQRSGYNGPGFMPNYNRTEQ 459
>SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012)
Length = 704
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 615 GTQTPDRLTLLSASLNSISSMPSPVYQCKKALRLN 511
G +TP R+ L+ +++ PSP+ KKA +L+
Sbjct: 353 GQKTPGRILLMHNQKKNMAERPSPISYGKKARKLS 387
>SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22)
Length = 1421
Score = 28.3 bits (60), Expect = 5.8
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = -2
Query: 649 LSSSAVASWYCWYSDTRSFDVALCFVELHLVHA 551
++ + SWYCW+ ++ ++C L + A
Sbjct: 715 MAHRTLVSWYCWFGRKKTIAASMCVAALAAIVA 747
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 86 AVRGTAGTSSRRTWSATPGGSGRRTLG 6
A++GT G + TWS P SG + +G
Sbjct: 377 ALKGTVGPGNVGTWSGVPSQSGPQFMG 403
>SB_33103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 27.9 bits (59), Expect = 7.7
Identities = 24/98 (24%), Positives = 43/98 (43%)
Frame = +3
Query: 195 RAHRAGARAADVRRQEHDGRCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFV 374
R +R+ A+ D E +C H R +GR+ ++ V+ + + SS
Sbjct: 119 RMYRSSAKTKDETTSERQDQCGKHHSRSFGSRNKGKGRLQIRHVEPE----SDTESSSET 174
Query: 375 EWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKR 488
E ++ T C+ P+G ST + + +Q+L KR
Sbjct: 175 E---SDKDTQTCEY-PQG--KHSTILDESKQMQDLDKR 206
>SB_42833| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)
Length = 641
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +3
Query: 354 KNSSFFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSACSDVKLSC 533
K+SS F W ++V T + + P GL+ G + +QE F R F+ + L
Sbjct: 10 KHSSCFSSW-QSDVGTILDLLFPPGLEPDRQHPGGASGVQEPFTRHPYGFTTTLSLNLRS 68
Query: 534 TGTPARAWTRWSS 572
G A SS
Sbjct: 69 VGESLMAMAAASS 81
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,665,667
Number of Sequences: 59808
Number of extensions: 415475
Number of successful extensions: 1807
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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