Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30134
(709 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_1002| Best HMM Match : OTCace_N (HMM E-Value=0) 38 0.011
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 37 0.018
SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 36 0.024
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 36 0.032
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 36 0.043
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.056
SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8) 35 0.074
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 34 0.098
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 33 0.23
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 33 0.30
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 32 0.40
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_52626| Best HMM Match : DUF437 (HMM E-Value=3.2) 32 0.52
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_33905| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 31 0.92
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 31 0.92
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 31 1.2
SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2) 31 1.2
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 31 1.2
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 30 1.6
SB_10900| Best HMM Match : I-set (HMM E-Value=0) 30 1.6
SB_36777| Best HMM Match : VWA (HMM E-Value=0) 30 1.6
SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062) 30 1.6
SB_22052| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 30 2.1
SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10) 30 2.1
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 2.8
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 2.8
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 29 3.7
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 3.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07) 29 3.7
SB_31237| Best HMM Match : Cathelicidins (HMM E-Value=0.58) 29 3.7
SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57) 29 4.9
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_3069| Best HMM Match : zf-C2H2 (HMM E-Value=1e-06) 29 4.9
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 4.9
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 28 6.5
SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 28 6.5
SB_47082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 28 6.5
SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 6.5
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24) 28 6.5
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 28 6.5
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 28 6.5
SB_15358| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.03) 28 6.5
SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_64| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 28 6.5
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_44033| Best HMM Match : SRCR (HMM E-Value=1.3) 28 8.5
SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 8.5
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 28 8.5
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_382| Best HMM Match : Extensin_2 (HMM E-Value=0.61) 28 8.5
SB_36903| Best HMM Match : p450 (HMM E-Value=0) 28 8.5
SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_27684| Best HMM Match : DUF1660 (HMM E-Value=3.8) 28 8.5
SB_10217| Best HMM Match : ubiquitin (HMM E-Value=1.6e-06) 28 8.5
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 303 INTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFP-QSSPSPVKLDPIRPTQYRP 479
+ TPT ++ +TP P T ++P P + P Q++P+P P PTQ P
Sbjct: 10 LTTPTLTKATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTP 69
Query: 480 --SSPTPFNP 503
++PTP P
Sbjct: 70 TPATPTPTTP 79
Score = 35.5 bits (78), Expect = 0.043
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 9/102 (8%)
Frame = +3
Query: 261 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPI--IFNPFPQSSP 434
P P + P T + ++ +TP P T P P + P P ++P
Sbjct: 41 PTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTP 100
Query: 435 SPVKLDPI-------RPTQYRPSSPTPFNPIRTNQLTNLNLP 539
+P K P PT + P+ PTP P T + P
Sbjct: 101 TPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTP 142
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 399 PIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRT 512
P + PQ++P+P K P PT + P+ P+P P T
Sbjct: 13 PTLTKATPQTTPTPTK--P-TPTTHTPTKPSPTTPTST 47
>SB_1002| Best HMM Match : OTCace_N (HMM E-Value=0)
Length = 563
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = +3
Query: 369 DITTTSQPKPPIIFNP-FPQS---SPSPVKLD---PIRPTQYRPSSPTPFNPI 506
D+ TTS P P +++ P P S PSP K D P PT +R + P P P+
Sbjct: 88 DVRTTSPPTPMVVYGPHLPPSMPAPPSPRKADRGWPFPPTVHRMTGPEPLPPV 140
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 36.7 bits (81), Expect = 0.018
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = +3
Query: 270 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKL 449
P T+ P + IN PT +S+ + Q I +T+ P P NP P +P+P+
Sbjct: 162 PSTQLPSTQAPIN-PTPINSNSHQL---QLLSTLIPSTTAPINPAAINPTP-INPTPINP 216
Query: 450 DPIRPTQYRPSSPTPFNPIRTNQLTNLNLPEFNHFPIDLN 569
PI P+ ++PS P + + L L + P +N
Sbjct: 217 TPINPSSHQPSCYQPSSHQPNSHQPQLLLTQLPSTPAPIN 256
Score = 35.5 bits (78), Expect = 0.043
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Frame = +3
Query: 270 PVTEEPEDEYEIN----TPTAFSSSGYSTPEPQNDFYDITTTSQP---KPPIIFNPFPQS 428
P T P + IN PT + + + Q Y ++ QP +P ++ P S
Sbjct: 193 PSTTAPINPAAINPTPINPTPINPTPINPSSHQPSCYQ-PSSHQPNSHQPQLLLTQLP-S 250
Query: 429 SPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLTNLNLP 539
+P+P+ PI P+ Y+P+S P P + QL + LP
Sbjct: 251 TPAPINPTPINPSSYQPNSHPPQLP--STQLPSTQLP 285
Score = 31.9 bits (69), Expect = 0.52
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = +3
Query: 270 PVTEEPEDEYEINTPTAFSSSGY--STPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPV 443
P T P + IN P+++ + + P Q + +T P + FP S+P+P+
Sbjct: 249 PSTPAPINPTPIN-PSSYQPNSHPPQLPSTQLPSTQLPSTQLPSTQLPSTQFP-STPAPI 306
Query: 444 KLDPIRPT-----QYRPSSPTPFNPIRTNQLTNLNL 536
PI PT Y+P+S P P T L L
Sbjct: 307 NPTPINPTPINCSSYQPNSHQPQFPSTQLLSTQLQL 342
>SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 828
Score = 36.3 bits (80), Expect = 0.024
Identities = 29/88 (32%), Positives = 39/88 (44%)
Frame = +3
Query: 258 EPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPS 437
EP KP EPE E P + S + EP+ F D S KPP P+ P
Sbjct: 489 EPIKP--PEPEPLKEAPPPVSISPA-----EPKVKFLDSVKISSYKPPEPNPVAPKEPPK 541
Query: 438 PVKLDPIRPTQYRPSSPTPFNPIRTNQL 521
P+ L P + + + +P P P +T QL
Sbjct: 542 PI-LKPTKAPEPK-LAPAPATPAKTEQL 567
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 35.9 bits (79), Expect = 0.032
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 291 DEYEINT-PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPT 467
+ +E++ P + +SS S PEP + P PP P P+++P P I P
Sbjct: 579 ESFEVSLKPASATSSSRSPPEPFELRKALPKHESPSPPSRVPPQPETAPKP--FPNITPP 636
Query: 468 QYRPSSP-TP 494
+ RPS P TP
Sbjct: 637 EVRPSLPGTP 646
>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
Length = 242
Score = 35.9 bits (79), Expect = 0.032
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 297 YEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP--PIIFNPFPQSSPSPVKLDPIRPTQ 470
Y + +PTA P P TT S P PI P + PSP DPI P
Sbjct: 12 YILYSPTAPRPHRPIAPSPLGP----TTPSPPSHHGPISLRPHRPTIPSPH--DPITPRP 65
Query: 471 YRPSSPTPFNPI 506
+RP++P P +PI
Sbjct: 66 HRPTAPRPHDPI 77
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Frame = +3
Query: 249 VTDEPAKPVTEEPEDEY-----EINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN 413
+ P P T P + + PT S TP P T +P PI
Sbjct: 26 IAPSPLGPTTPSPPSHHGPISLRPHRPTIPSPHDPITPRPHRP-----TAPRPHDPIA-- 78
Query: 414 PFPQSSPSPVKLDPIRPTQYRPSSPT 491
P P+S PV P RP RP PT
Sbjct: 79 PRPRSPHGPVAPRPHRPISPRPHRPT 104
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Frame = +3
Query: 312 PTAFSSSGYSTPEPQNDFYDITTTSQ----PKPPIIFNPFPQSSPSPVKLDPIRPT---Q 470
P A S G +TP P + I+ P P P P +P DPI P
Sbjct: 25 PIAPSPLGPTTPSPPSHHGPISLRPHRPTIPSPHDPITPRPHRPTAPRPHDPIAPRPRSP 84
Query: 471 YRPSSPTPFNPI 506
+ P +P P PI
Sbjct: 85 HGPVAPRPHRPI 96
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 35.5 bits (78), Expect = 0.043
Identities = 26/98 (26%), Positives = 32/98 (32%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 410
T+ T P KP T P TPT + +TP TT+ KP
Sbjct: 65 TNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTT 124
Query: 411 NPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLT 524
P + P P P P+ PT P T T
Sbjct: 125 PPGTTTPTKPTTTTP--PATTTPTKPTTTTPPATTTPT 160
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/98 (25%), Positives = 31/98 (31%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 410
T+ T P KP T P PT + G +TP TT+ KP
Sbjct: 93 TTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTT 152
Query: 411 NPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLT 524
P + P P P P+ T P T T
Sbjct: 153 PPATTTPTKPTTTTP--PATTTPTKSTTTTPPATTTPT 188
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/98 (24%), Positives = 30/98 (30%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 410
T+ T P KP P PT + +TP TT+ KP
Sbjct: 51 TTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTT 110
Query: 411 NPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLT 524
P + P P P P+ PT P T T
Sbjct: 111 PPATTTPTKPTTTTP--PGTTTPTKPTTTTPPATTTPT 146
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Frame = +3
Query: 252 TDEPAKPVTEEPEDEYEINTPTAFSSSGYSTP-EPQNDFYDITTT----SQPKPPIIFNP 416
T P P T P PT + +TP +P TTT + PP P
Sbjct: 44 TTTPTTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTP 103
Query: 417 F-PQSSPSPVKLDPIRPTQYR-PSSPTPFNPIRT 512
P ++ P P +PT P + TP P T
Sbjct: 104 TKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTT 137
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/72 (26%), Positives = 26/72 (36%)
Frame = +3
Query: 309 TPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSP 488
TPT + +TP + TT+ KP P + +P P P P+ P
Sbjct: 49 TPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTP--PATTTPTKP 106
Query: 489 TPFNPIRTNQLT 524
T P T T
Sbjct: 107 TTTTPPATTTPT 118
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 35.1 bits (77), Expect = 0.056
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = +3
Query: 261 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 440
P P++ P PT ++ +S P P Y QP+PP I P P S P
Sbjct: 910 PMPPISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY------QPQPPGIMQP-PTSIPPS 962
Query: 441 VKLDPIRPTQYRPSSPTPFNP 503
P+ P + PSS F P
Sbjct: 963 ---QPMAPPSFPPSSMGGFPP 980
>SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8)
Length = 355
Score = 34.7 bits (76), Expect = 0.074
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Frame = +3
Query: 129 RRLQARKDSTGAWFNS*SKKTRICQTVF*IRGCLTSFKSSVTDEPAKPVTEEPEDEYEIN 308
++++ +G WF ++ R T RG +F ++ PA P T P + I
Sbjct: 186 KKIRLYNQVSGRWFEWMNQARR---TTSGRRGPSNNFSNNF-GTPATPAT--PANGVPIA 239
Query: 309 TPTAFSSSGYSTPEPQNDFYD---ITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRP 479
P+ ++ G TP P F TT++P P + P P+ P P K + P Q
Sbjct: 240 GPSGMATPGAFTPPPAPVFTPPPPYRTTAKPFPKMSLTPTPKKPPVP-KKPVLTPAQLEG 298
Query: 480 --SSPTP 494
SP+P
Sbjct: 299 LLKSPSP 305
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 34.3 bits (75), Expect = 0.098
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Frame = +3
Query: 252 TDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP-----PIIFNP 416
T P P+ E P + P A + P P N I T + P P P NP
Sbjct: 201 TAPPTPPMPETPLPPGSPHIPPA-PLHPHIPPAPPNPSKAIATPNPPMPETPLPPATPNP 259
Query: 417 F-PQSSPSPVKLDPIRPTQYRPSSPTPFNPI 506
F P +SP+P + P P P+ P P P+
Sbjct: 260 FIPPASPNP-SIPPAPPNPSIPAPPNPSIPL 289
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/68 (29%), Positives = 26/68 (38%)
Frame = +3
Query: 336 YSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTN 515
Y P P N F + PP NP+ ++P + P P P P P NP
Sbjct: 295 YIPPAPPNLFIPSAPPNPHIPPAPPNPYIPTAPPNPSIPPAPPNPSIP--PAPPNPSIPP 352
Query: 516 QLTNLNLP 539
NL +P
Sbjct: 353 APPNLFIP 360
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 94 PGAIPVGGPVRQGGFRQGRIAP-VPGSIPRVRRPG 195
PG IP P R+ G R G I P VPG I RRPG
Sbjct: 517 PGGIPGRTPGRRPGGRPGNIPPFVPGLIIPSRRPG 551
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 452 SHPSHAIQTVFTHT-FQPYQNEPINKP----QPARIQPLSNRPQRPIFRPETKPFVXXXX 616
S PS+ ++++ +P EP N+ Q + P S P+ ++ +T+P
Sbjct: 833 SPPSNKPESLYHQADARPVSPEPENQYNHYYQTRPVSPPSKEPETRYYQEDTRPASPPAK 892
Query: 617 XNPARQTVHKTQGANSAPPLETHNRNYSP 703
R +T+ S PP ++H R + P
Sbjct: 893 EPETRYFQSETKPVESLPPPQSHQRTFEP 921
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/85 (23%), Positives = 33/85 (38%)
Frame = +3
Query: 249 VTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQS 428
V +P + T+ E E+ P + TPEP + P + PF +
Sbjct: 833 VASKPVEVETKPAEPEHAAYKPDE-PEQAFFTPEPASQMNSQFNDQPNLAP--YEPFARP 889
Query: 429 SPSPVKLDPIRPTQYRPSSPTPFNP 503
P + P + + Y+P +PT P
Sbjct: 890 QQPPAPMPPQQQSPYQPPAPTMQQP 914
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +3
Query: 240 KSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGY--STPEPQNDFYDITTTSQPKPPIIFN 413
K S T + KP E + PT S P+PQ +T +P+
Sbjct: 1696 KRSSTPDSRKPTGENKSHRNDRRPPTPQDKKQEPPSRPDPQQVGRGHPSTREPQRTA--- 1752
Query: 414 PFPQSSPSPVKLDPIRPTQYRPSSPTPF 497
P P++ P + P +P YR + PF
Sbjct: 1753 PTPRTQQPPARAPPAQPPTYRNPAQAPF 1780
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 387 QPKPPIIFNPFPQS-SPSPVKLDPIRPTQYRPSSPTP 494
QP PP P P P P+ +P PT+ P P P
Sbjct: 1075 QPPPPSTSQPVPPPRQPDPIPTNPAHPTEPPPRQPKP 1111
>SB_52626| Best HMM Match : DUF437 (HMM E-Value=3.2)
Length = 267
Score = 31.9 bits (69), Expect = 0.52
Identities = 25/86 (29%), Positives = 37/86 (43%)
Frame = +3
Query: 255 DEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSP 434
D+ P E E E + +TPT +G P+P +T T P +I P P++ P
Sbjct: 171 DDDELPPQEHEEMEEDEDTPTPAGKTG--NPKPYYHARQVTCTG---PEMI--PGPETIP 223
Query: 435 SPVKLDPIRPTQYRPSSPTPFNPIRT 512
P + PT R + T +P T
Sbjct: 224 GPEMIPKSTPTDPRTRNDTEESPKST 249
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 497 QPYQ--NEPINKP--QPARIQPLSNRPQRPIFRPETKPFVXXXXXNPARQTVHKTQGANS 664
QPY+ N+P N+P QP QP + +P +P +P P Q ++T +
Sbjct: 208 QPYKQTNQPTNQPTNQPTN-QPTNQPTNQPTNQPTNQP-TNQPTNQPTNQPTNQTNQPTN 265
Query: 665 APPLETHNRNYSPTN 709
P T+ PTN
Sbjct: 266 QPNQPTNLPTDQPTN 280
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 482 FTHTFQPYQNEPINKP--QPARIQPLSNRPQRPIFRPETKPFVXXXXXNPARQTVHKTQG 655
+ T QP N+P N+P QP QP + +P +P +P P QT T
Sbjct: 210 YKQTNQP-TNQPTNQPTNQPTN-QPTNQPTNQPTNQPTNQP-TNQPTNQPTNQTNQPTNQ 266
Query: 656 ANSAPPLETHNRNYSPTN 709
N L T P N
Sbjct: 267 PNQPTNLPTDQPTNQPAN 284
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 345 PEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSP 488
P P+ F D T + P P + NP + P P+ P R +P+ P
Sbjct: 536 PVPKPQFDDTPTRAPPPPDMQTNPDTERRPPPLPPAPKRALDLKPNLP 583
>SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 31.5 bits (68), Expect = 0.69
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +3
Query: 339 STPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNP 503
STP+P+ IT TSQP P P + P P +P P P+ P P NP
Sbjct: 240 STPQPK-----ITGTSQPSNPTATQPQNPAIPQPQ--NPAIPQLPNPAIPQPPNP 287
>SB_33905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 372 ITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLT 524
+T T Q PP ++ P SPS +K D + T R P P++ +++
Sbjct: 76 VTETLQTTPPPTYSSIPSYSPS-LKFDNSQDTPLRSKEGNPKTPVKRRKIS 125
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 31.1 bits (67), Expect = 0.92
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 324 SSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPT 491
+S GYS P + + + + P P P SP+ P P+ Y P+SP+
Sbjct: 436 TSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSPS 490
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 31.1 bits (67), Expect = 0.92
Identities = 23/82 (28%), Positives = 32/82 (39%)
Frame = +2
Query: 437 PCQARSHPSHAIQTVFTHTFQPYQNEPINKPQPARIQPLSNRPQRPIFRPETKPFVXXXX 616
P SH SH + F+ Y P+ R ++PQ P +P KP +
Sbjct: 433 PAYGTSHASHTPANRYNR-FRGYC------PRQKRGNYQGSQPQLPFRKPVRKPLIHCTQ 485
Query: 617 XNPARQTVHKTQGANSAPPLET 682
QT K QG+ S P + T
Sbjct: 486 KRRGFQTCDKPQGSQSFPRIPT 507
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 31.1 bits (67), Expect = 0.92
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 67 SPIPPRLQIPGAIPVGGPVRQG---GFRQGRIAPVPGSIPRVRRP 192
S PPR +P P+GGPVR G + PVP + RP
Sbjct: 336 SASPPRHTLPRPEPIGGPVRGSEPKGVARADAPPVPARTDQTPRP 380
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 31.1 bits (67), Expect = 0.92
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +3
Query: 264 AKPVTEEPEDEYEINTPTAFS--SSGYSTPEPQNDFYDITTTSQPKP-PIIFNPFPQS-S 431
+ P + P + N P++ ++ S P+P N +S PKP NP P + S
Sbjct: 579 SNPKSNNPSSNPKPNNPSSNPRPNNPSSNPKPNNPXXXXNPSSNPKPNNPSSNPKPNNPS 638
Query: 432 PSPVKLDPI-RPTQYRPSS-PTPFNP 503
+P P P PSS P P NP
Sbjct: 639 SNPKSNSPASNPKSNNPSSNPKPNNP 664
>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
Length = 639
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 279 EEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPI 458
EE E E+ +P+ TPE + T P NP P +P P P
Sbjct: 431 EEEETLEEVTSPSE-EQPAEPTPEEHVEPEPTLATGSSNPHHHGNPHPHGNPRPKPQLPQ 489
Query: 459 RPTQYRP 479
RPT +P
Sbjct: 490 RPTPIQP 496
>SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2)
Length = 436
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = +3
Query: 324 SSSGYSTPEPQNDFY--DITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSP--- 488
S +G S ++D + +I TT+Q P + + F + PSP RP Y P SP
Sbjct: 64 SEAGTSGSPGESDVFPKEIPTTAQL--PSMASDFSRDCPSPSTPTRKRPDGYTPFSPFSR 121
Query: 489 TPFNPIRTNQLTNLNLPEFNH 551
N IR N NL E H
Sbjct: 122 CGVNSIRRRSKYNQNLVEGMH 142
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 285 PEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRP 464
PED+ E+++ +A +SS ST P N + S + P ++P P+ +
Sbjct: 30 PEDDLEVSSVSASASS--STSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQS 87
Query: 465 TQYRPSSP 488
RP +P
Sbjct: 88 NNPRPHTP 95
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 249 VTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQND-FYDITTTS 386
+ ++ K ++EPE E + +A + S PE D FYD+ TTS
Sbjct: 2123 IVNKTPKQTSKEPEPEVSPKSESAEALKVTSAPEVTKDTFYDVNTTS 2169
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 443 QARSHPSHAIQT-VFTHTFQPYQNEPINKPQPARIQPLSNRPQRP 574
QA P H +Q + H +P+Q + + P + QPL + PQ P
Sbjct: 1162 QAMGPPHHTMQQPLIHHPHEPHQVQAMGPPPHSMQQPLLHHPQDP 1206
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = +2
Query: 374 HHHFSAKTTHNL*PVPTIFS*PCQARSHPSHAIQTVFTHTFQPYQNEPINKPQPARIQPL 553
H H A+ TH P + P R H T +THT+ P P + P
Sbjct: 742 HPHLHAQYTHAYTPSTHTLTRPVNPRLH------TQYTHTYTPGTPTPTQREYTHAYTPS 795
Query: 554 SNRPQRPI 577
+ P RP+
Sbjct: 796 TPTPTRPV 803
>SB_10900| Best HMM Match : I-set (HMM E-Value=0)
Length = 1642
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +3
Query: 273 VTEEPEDEYEINTPTAFSSSGYSTPEPQN-DFYDITTTSQPKPPIIFNPFPQSSP----S 437
+ E+P ++N P + PE +N +++ P PP+ P + S
Sbjct: 1450 IAEDPSHLNDLNHPLSLQDKTPPFPERKNTTASEVSIEFPPPPPLDTLPDEERQAVEGYS 1509
Query: 438 PVKLDPIRPTQYRPSSPTPFNPIRT 512
PV D P + P SP P P RT
Sbjct: 1510 PVDSDVSYP--WPPESPVPMKPPRT 1532
>SB_36777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1303
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 360 DFYDITTTSQPKPPIIFNPFPQSSPSPVKLDP 455
D D S P P ++ NP PQ +P+P P
Sbjct: 1247 DICDNLQVSTPSPSLVPNPVPQPAPAPAPAPP 1278
>SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062)
Length = 282
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/89 (26%), Positives = 35/89 (39%)
Frame = +3
Query: 285 PEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRP 464
P+ + TP S+ +S+P+P + S P F PQ PS P+
Sbjct: 175 PQPSLRVRTPPFKSAPLFSSPQPS-----LQVRSPPFKSAAFPSSPQ--PSLQVRTPLFK 227
Query: 465 TQYRPSSPTPFNPIRTNQLTNLNLPEFNH 551
+ PSSP P + T + LP H
Sbjct: 228 SAALPSSPQPSLQVHTPPFKSTPLPSSPH 256
>SB_22052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -3
Query: 272 RFRRFISD*RFERGEASTDLKDGLANPGLLTLGIEPGT--GAILPCLKPPCLTGPPTGMA 99
R RRFIS + E+ + + ++ D L+ P L ++ + P T + PC + PP G
Sbjct: 40 RHRRFISLCKLEKSDCTPNINDVLSKPYLCSMELNPATIGQSSTPCNSNGTIP-PPIGAF 98
Query: 98 PG 93
G
Sbjct: 99 NG 100
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 378 TTSQPKPPIIFNPFPQSSPSP-VKLDPIRPTQYRPSSP 488
T + P PP+ P P++ P P P+ PT+ P++P
Sbjct: 127 TGTLPPPPVTPPPGPETPPPPDTPAPPVPPTEAPPTAP 164
>SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10)
Length = 849
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = +3
Query: 366 YDITTTSQPKPPIIFNPFPQSS----PSPVKLDPIRPTQYRPSSPTPFNPIRTNQLTNLN 533
Y+I QP P FNP+ S PSP+ + I Y P P NP +
Sbjct: 732 YNINPPVQPMP---FNPYGSSYGSALPSPIGMPLIPGMTYPKCLPNPSNPCKP---LKFK 785
Query: 534 LPEFNHFPIDLND 572
P+F I L D
Sbjct: 786 TPKFKSIRIKLKD 798
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +3
Query: 312 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRP 479
PT + P ++TTT P PP + P + P PV D PT P
Sbjct: 39 PTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTD--APTTVPP 92
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 258 EPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPS 437
E K +PE+E++I P P+P+ +F QP+P +
Sbjct: 578 EEVKIEQPQPEEEFKIEQPQPKEEVKIEQPQPEEEF----KIEQPQPKEVVKIEQPQPEE 633
Query: 438 PVKLDPIRP-TQYRPSSPTPFNPIRTNQ 518
V+++ +P + + P P +R Q
Sbjct: 634 EVRIEQPQPKEEVKIEQPQPKEEVRIEQ 661
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 219 RGCLTSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEP 353
R T F S PA P+T + E+ + I P + G S P P
Sbjct: 117 RNADTPFTPSRCIPPASPLTPDSEEGFVITEPCTTKNRGRSKPSP 161
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 390 PKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQ 518
P PP P +SP P++ P+ P Q R + TP +P R +
Sbjct: 928 PSPPRRRRRSPSNSPPPMRSSPLPPPQ-RKRASTPPSPRRARR 969
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +3
Query: 267 KPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK-PPIIFNPFPQSSPSP- 440
+PV +P++ + ++ +S S+P PQ D + T + K P P SP P
Sbjct: 415 QPVQPKPQEVDSSSAGSSVQTSNDSSPAPQEDDKSSSATEEYKSEPSSAQPSANQSPEPE 474
Query: 441 ---VKLDPIRPTQYRPSSPTP 494
+ P+ +SP P
Sbjct: 475 EEKEEASPVPSKDEEETSPMP 495
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 312 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPII 407
P + +SG S P+P D Y++T + P+P +
Sbjct: 1396 PGYYCTSGVSVPKPYIDTYNVTNGTCPEPSFL 1427
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +3
Query: 375 TTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLT 524
TTT+ P P P + P P+ L P P P P P PI+T + T
Sbjct: 890 TTTAPPTTPTTPKPTTPAPPPPLPLAPEPP----PPLPPPPPPIQTTRPT 935
>SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07)
Length = 487
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +3
Query: 276 TEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPV-KLD 452
T P Y NTP + GY P N S+P ++P+ Q SPSP +
Sbjct: 288 TPSPAAGYAPNTPNPATPGGYGGPYTPNTPGPAMYGSEP----TYSPYTQ-SPSPAGYAN 342
Query: 453 PIRPTQYRPSSPTPFNP 503
P+ P P +NP
Sbjct: 343 PMTPGGGLPPVSPAYNP 359
>SB_31237| Best HMM Match : Cathelicidins (HMM E-Value=0.58)
Length = 562
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +3
Query: 216 IRGCLTSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK 395
IR T +S PVT P +++ TPT+ S E + F +I + P
Sbjct: 59 IRDSTTQSNTSTATNELDPVTVSPVLTHQVMTPTSKERSVRKVWEKEKVFNEIVAMALPV 118
Query: 396 PPI 404
P +
Sbjct: 119 PNV 121
>SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57)
Length = 1121
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +3
Query: 261 PAKPVTEEPEDEY-EINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPS 437
P PV+++ D+ E+ P+++ ++ ++P + +P P + +P+
Sbjct: 788 PDTPVSDKASDKNPEVTEPSSYVNTEMASPAAAGSSSITPSNLRPTNPTPAHATDGGTPT 847
Query: 438 PVK-LDPI------RPTQYRPSSPTP 494
P++ +P +P+ RPS+PTP
Sbjct: 848 PLRPTNPTPAHAASKPSNPRPSNPTP 873
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 6/101 (5%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPI-I 407
+S S T P + P ++ +SS ++ P + + +SQP PP
Sbjct: 1009 SSQSSQATHTPPPRAVDLPHPSSPHSSSALYSSPSRTSNLPYTTYTNTAISSQPSPPYSS 1068
Query: 408 FNPFPQSSPSPVKLDPIRPT-QY----RPSSPTPFNPIRTN 515
+P P + V + P+ QY R + P P RT+
Sbjct: 1069 TSPHPSHFSTRVSTNGSSPSCQYTYADRSTQEKPLPPTRTS 1109
>SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 437 PCQARSHPSHAIQTVFTHTFQPYQNEP 517
PC R+ SH + THTFQ + P
Sbjct: 672 PCHTRTFQSHLVTPCHTHTFQSHLVTP 698
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 437 PCQARSHPSHAIQTVFTHTFQPYQNEP 517
PC R+ SH + THTFQ + P
Sbjct: 863 PCHTRTFQSHLVTPCHTHTFQSHLVTP 889
>SB_3069| Best HMM Match : zf-C2H2 (HMM E-Value=1e-06)
Length = 625
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 276 TEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS-PSPVKLD 452
TE D+++ P+ F + Y PE Q+ ++ + + P+ P+P S P PV +
Sbjct: 416 TELITDDFD---PSEFDA--YLNPEQQDPALLMSPSGRQTHPLRHFPYPPDSYPEPVHMQ 470
Query: 453 PIRPTQYRPSSP 488
I Y P P
Sbjct: 471 TIHHRPYPPQYP 482
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Frame = +3
Query: 285 PEDEYEINTPTAFSSSGYSTPEP------QNDFYDITTTSQPKPPIIFNP--FPQSSPSP 440
P E NTP ++ Y+TP Q + +TT+QP P F P P P+P
Sbjct: 825 PAQTTEANTPPVQTTESYNTPTETTALPYQETSTESSTTAQPTQPPTFAPSIAPTQPPTP 884
>SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 1021
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 336 YSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTN 515
YS P ++DFY +PP+ +P+ + P++ DP R P P+R +
Sbjct: 840 YSRPPLRDDFYSRPPLLDDQPPLRDDPY---NRPPLRDDPFGRPPLR-DDPLSRPPLRDD 895
Query: 516 QLTNLNLPE--FNHFPIDLNDLY 578
+ L L + +N P+ ND Y
Sbjct: 896 PHSRLPLRDKPYNRDPLQ-NDQY 917
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 417 FPQSSPSPVKL-DPIRPTQYRPSSPTPFNPIRTNQLTNLNLPEFNHFPIDLNDLYS 581
FP + PV + P PT+ + P P+ P+ + + ++LP F + ++D+ S
Sbjct: 2241 FPSRNQVPVHVTQPQAPTEV--AVPVPYRPVLISAVPQVSLPSQEFFSVLVSDINS 2294
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 375 TTTSQPKPPIIFNPF--PQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLTNLNL 536
TTT+ P P P P P+P +P P P +P P +P T LNL
Sbjct: 1011 TTTNVPDPLPTDPPTEPPTDPPTPPPTEPPTPPPTEPPTPPPTDP-PTQPRVELNL 1065
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 52 YAQNDSPIPPRLQIPGAIPVGGPVRQGGFRQGRIAPVP--GSIPRVRRPGFARPSFKS 219
+A N SP R GA G P+ + R VP G IP ++RP F PSF S
Sbjct: 820 HAMNKSP--ERSPREGADRRGLPMTLSDLNRRREQGVPSEGPIPGLKRPDFLLPSFGS 875
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +3
Query: 228 LTSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSG-YSTPEPQNDFYDITTTSQPKPPI 404
L +S+++ P PV ++ T FS ++ E + + +SQP+PP
Sbjct: 825 LQDLRSAISIIPQDPVLFSGTLRKNLDPFTQFSDDALWNALEEAGNQVNPPMSSQPQPPP 884
Query: 405 --IFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPI 506
NP S P P + + P P P N +
Sbjct: 885 GNQVNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQV 920
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 282 EPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPI--IFNPFPQSSPSPVKLDP 455
+P ++N P S P P N + +SQP+PP NP S P P+ +
Sbjct: 881 QPPPGNQVNPPM----SSQPQPPPGNQV-NPPMSSQPQPPPGNQVNPPMSSQPQPLPGNQ 935
Query: 456 IRPTQYRPSSPTPFNPI 506
+ P P P N +
Sbjct: 936 VNPPMSSQPQPPPGNQV 952
Score = 27.9 bits (59), Expect = 8.5
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +3
Query: 270 PVTEEPED--EYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPI--IFNPFPQSSPS 437
P++ +P+ ++N P S P P N + +SQP+PP NP S P
Sbjct: 923 PMSSQPQPLPGNQVNPPM----SSQPQPPPGNQV-NPPMSSQPQPPPGNQVNPPMSSQPQ 977
Query: 438 PVKLDPIRPTQYRPSSPTPFNPIRTNQLTNLNLPE 542
P + + P P P N ++ + + LP+
Sbjct: 978 PPPGNQVNPPMSSQPQPPPGNQVQLKEAVD-ELPD 1011
>SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 1458
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 369 DITTTSQPKPPIIFNPFPQSSPSPVKLDPIR--PTQYRPSSPTPFNPIRTNQLTNLNLPE 542
D +T P PPI P P++ K +PI PT+ RP + P++T N+P+
Sbjct: 39 DPASTPPPAPPI---PTPRTK----KAEPIGAPPTKLRPPTVLIVRPLKTGTTPRKNIPD 91
>SB_47082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +3
Query: 111 RRTSQARRLQARKDSTGAWFNS*SKKTRICQTVF*IR-GCLTSFKSSVTDEPAKPVTEEP 287
R+TS A AR + ++ + ICQ F GC+ +FK KP P
Sbjct: 509 RKTSTAHPDDARPSTPQSFVAQDPMPSTICQDDFVGNVGCVITFKDEEMPNSCKPRFPRP 568
Query: 288 EDEYEINTPTAFSSSGYSTPE 350
E E N S +S P+
Sbjct: 569 EVELWRNGGPFAGISDFSLPD 589
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 88 QIPGAIPVGGPVRQGGFRQGRIAPVPGSIPRVRRPGFARPSFKSVDASP 234
++PGAI GG QGG QG PG P + + G P F P
Sbjct: 205 EMPGAIQPGGAPLQGGPPQGESHGQPGP-PALLQQGPPGPPFHGEPRPP 252
>SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 729
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 52 YAQNDSPIPPRLQIPGAIPVGGPVRQGGFRQGRIAPVP--GSIPRVRRPGFARPSFKS 219
+A N SP R GA G P+ + R VP G IP ++RP F PSF S
Sbjct: 16 HAMNKSP--ERSPREGADRRGLPMTLSDLNRRREQGVPSEGPIPGLKRPDFLLPSFGS 71
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 410
TS +SS EP+ T+ + S+SG S +P ++ + + +PP I
Sbjct: 1717 TSDRSSTLPEPS--TTDATTTHESVTAGEPLSTSGVSY-KPLSEPPSLESLPADEPPSIS 1773
Query: 411 NPFPQSSPSPVKLDPIRPTQYRPS 482
+S P+ D PT+ P+
Sbjct: 1774 RHLSNTSSEPISGDTPTPTEPAPA 1797
>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = +3
Query: 225 CLTSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPP 401
CL S +S A P T P E T + S+S +T P T PP
Sbjct: 772 CLASTSTSAATTTAPPTTAPPTTTKEPTTDASTSTSAATTTAPATTTPPTTAPPTTAPP 830
>SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24)
Length = 440
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 515 PINK-PQPARIQPLSNRPQRPIFRPETKPFVXXXXXNPARQTVHKTQGANSAPPLETHNR 691
PI++ QP R + P RPIF P P H A S P L TH
Sbjct: 51 PISQVTQPVRAA--ATAPVRPIFTAHMSPAEADKLSAPILNGNHTVTSATSPPLLTTHAH 108
Query: 692 NYS 700
++S
Sbjct: 109 HHS 111
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 375 TTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTP 494
T TSQP + P P S+ +PV + +P PTP
Sbjct: 94 TETSQPATTTVPAPPPSSTTAPVNAPAQQQPLLQPQRPTP 133
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 515 PINK-PQPARIQPLSNRPQRPIFRPETKPFVXXXXXNPARQTVHKTQGANSAPPLETHNR 691
PI++ QP R + P RPIF P P H A S P L TH
Sbjct: 1598 PISQVTQPVRAA--ATAPVRPIFTAHMSPAEADKLSAPILNGNHTVTSATSPPLLTTHAH 1655
Query: 692 NYS 700
++S
Sbjct: 1656 HHS 1658
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +3
Query: 276 TEEPEDEYEINTPTAFSSSGYS-TPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 440
T P NTP F+SSG+ P P DF P PP + P P P
Sbjct: 279 TPPPPPPPPSNTPGMFASSGFQPPPPPPTDF-----APPPPPPEPTSELPPPPPPP 329
>SB_15358| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.03)
Length = 435
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 194 PGLLTLGIEPGTGAILPCLKPPCLTGPPTGMAPGI 90
PGL G+ PG +LPCL P L G P G+ PG+
Sbjct: 189 PGLP--GVLPGLPGVLPCL-PGVLPGLP-GVLPGL 219
>SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1104
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +3
Query: 219 RGCLTSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPE-PQNDFYDITTTSQPK 395
RG L + + +E +P+T+ +TP A S SG PE P Y T Q K
Sbjct: 155 RGDLILKEIASDEEVERPITQRLHQPLAFSTP-ALSQSGLGNPETPDVSLYKTCETPQ-K 212
Query: 396 PPIIFNPFPQS 428
P N F S
Sbjct: 213 PLDKMNEFLHS 223
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = +3
Query: 306 NTPTAFSSSGYSTPEPQNDFYDI-----TTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQ 470
N TAF STP P N+F + TT +PK I+ S P V + +
Sbjct: 826 NNHTAFIRIKTSTPAPSNEFLILPVEVEVTTDEPKTVGIY--LLNSGPKQVHVSSVAVEP 883
Query: 471 YRPSSPTPFNPIRTNQLT 524
+ F+P+ QL+
Sbjct: 884 GNSAVSVTFSPVVLKQLS 901
>SB_64| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 320
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 369 DITTTSQPKPPIIFNPFPQSSPSPVKLDPIR--PTQYRPSSPTPFNPIRTNQLTNLNLPE 542
D +T P PPI P P++ K +PI PT+ RP + P++T N+P+
Sbjct: 39 DPASTPPPAPPI---PTPRTK----KAEPIGAPPTKLRPPTVLIVRPLKTGTTPRKNIPD 91
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 411 NPFPQSSPSPVKLDPIRPTQYRPS--SPTPFNP 503
+P P SSPSP P P+ Y PS SP+ ++P
Sbjct: 6 SPSP-SSPSPDSPSPDSPSSYSPSPDSPSSYSP 37
>SB_44033| Best HMM Match : SRCR (HMM E-Value=1.3)
Length = 112
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 378 TTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPF 497
TT +P P PFP ++ P+ RP Y P P+
Sbjct: 16 TTRRPFPYTTRRPFPYTTRRPLPYTTRRPFPYTTRPPFPY 55
>SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 269
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 234 SFKSSVTDEPAKPVTEEPEDE-YEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPI 404
S S+ D+PA+ T + ++ + SG S +P ND +T ++Q KPP+
Sbjct: 29 SMPSTPEDKPARKQTSQGGGGLFDEDEDEGLFGSGASQKKPSND---VTQSAQKKPPV 83
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 27.9 bits (59), Expect = 8.5
Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 1/100 (1%)
Frame = +3
Query: 246 SVTDEP-AKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFP 422
S TD P + T+ PE + TP S++ P ND D + + P+
Sbjct: 150 STTDTPETQSPTQTPETQSTTTTPETQSTTDTRDPVNNNDTRDPVNNNDTRDPVNNRDTR 209
Query: 423 QSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLTNLNLPE 542
+ DP+ T R P N T + PE
Sbjct: 210 DPVNNTDTRDPVNNTDTR----DPVNNTDTETQSTTTTPE 245
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +3
Query: 225 CLTSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPI 404
CLT S++T PAKP +P + P ++S P PI
Sbjct: 2054 CLTQQTSTLTSTPAKPAVSQPIKIARLQNPGIVTASLALKPRQVQPISTTKYVPIGPKPI 2113
Query: 405 IFNP 416
+ NP
Sbjct: 2114 LPNP 2117
>SB_382| Best HMM Match : Extensin_2 (HMM E-Value=0.61)
Length = 314
Score = 27.9 bits (59), Expect = 8.5
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = +3
Query: 222 GCLTSFKSSVTDE--PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK 395
G + S ++S D+ P P+ E E ++ F+S P P + I + P+
Sbjct: 10 GGIPSRRASGADDEGPPSPLNTEMEPPIDVQ----FTSP---QPMPGRNSSPIVPRASPQ 62
Query: 396 PPIIFNPFPQS------SPSPVKLDPIRPTQYRPSSPTPFNPI 506
PP P+ S SPS P T Y +SP P++P+
Sbjct: 63 PPTA-RPYGTSPGTSAMSPSNPYSSPSPITHYMVNSPAPYHPM 104
>SB_36903| Best HMM Match : p450 (HMM E-Value=0)
Length = 644
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 315 TAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQS 428
T F S+ T P + F+++T PKPP++ P P+S
Sbjct: 534 TLFGSTCAKTFNP-DIFWNVTFPKTPKPPVVPIPQPKS 570
>SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1090
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 234 SFKSSVTDEPAKPVTEEPEDE-YEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPI 404
S S+ D+PA+ T + ++ + SG S +P ND +T ++Q KPP+
Sbjct: 918 SMPSTPEDKPARKQTSQGGGGLFDEDEDEGLFGSGASQKKPSND---VTQSAQKKPPV 972
>SB_27684| Best HMM Match : DUF1660 (HMM E-Value=3.8)
Length = 398
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 285 PEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRP 464
P+ + ++ P + G+S+P PQ+ + P+PP PQS +P+ + R
Sbjct: 279 PKQQEKVRIPAPTMTQGWSSPTPQS----LGPARSPRPP------PQSPRAPMSNNDERV 328
Query: 465 TQYRPSSPTP 494
P P P
Sbjct: 329 HPKGPMVPEP 338
>SB_10217| Best HMM Match : ubiquitin (HMM E-Value=1.6e-06)
Length = 479
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 384 SQPKPPIIFNP--FPQS-SPSPVKLDPIRPTQYRPSSPTPFN-PIRTNQLTNLNLPE 542
SQP P P P S SP+P + D +R +P+PFN P+ Q+ + P+
Sbjct: 105 SQPSPASSATPTRVPDSTSPTPAQADGLRHRGTPMQTPSPFNYPLGLPQMHFMQHPQ 161
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,266,183
Number of Sequences: 59808
Number of extensions: 519308
Number of successful extensions: 2203
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2115
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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