Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0244.Seq
         (797 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32780| Best HMM Match : SAICAR_synt (HMM E-Value=0)                 75   7e-14
SB_21014| Best HMM Match : SAICAR_synt (HMM E-Value=2.2e-28)           75   7e-14

>SB_32780| Best HMM Match : SAICAR_synt (HMM E-Value=0)
          Length = 278

 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = +3

Query: 255 DPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDMKIEFGV 434
           DP W+ EQ + A F   G  IG+ E+D M ++ I IFEI+E+AWA  D AL+DMKIEFGV
Sbjct: 135 DPFWTYEQCVEAAFEIGGRKIGKHELDIMSESAIAIFEIIERAWATVDVALVDMKIEFGV 194

Query: 435 DTE-GSIVL 458
           + + G ++L
Sbjct: 195 NRKTGELML 203


>SB_21014| Best HMM Match : SAICAR_synt (HMM E-Value=2.2e-28)
          Length = 265

 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = +3

Query: 255 DPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALIDMKIEFGV 434
           DP W+ EQ + A F   G  IG+ E+D M ++ I IFEI+E+AWA  D AL+DMKIEFGV
Sbjct: 45  DPFWTYEQCVEAAFEIGGRKIGKHELDIMSESAIAIFEIIERAWATVDVALVDMKIEFGV 104

Query: 435 DTE-GSIVL 458
           + + G ++L
Sbjct: 105 NRKTGELML 113


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,954,877
Number of Sequences: 59808
Number of extensions: 274631
Number of successful extensions: 543
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)