Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0240.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 38 0.008
SB_10121| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 31 0.68
SB_56089| Best HMM Match : CLN3 (HMM E-Value=9.8e-07) 31 0.90
SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11) 31 0.90
SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38) 30 1.6
SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_46611| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 30 2.1
SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_41840| Best HMM Match : Omega_Repress (HMM E-Value=2) 29 2.7
SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39) 29 2.7
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 29 2.7
SB_55434| Best HMM Match : Flocculin (HMM E-Value=6.7) 29 3.6
SB_40142| Best HMM Match : DUF827 (HMM E-Value=1.2) 29 3.6
SB_19256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098) 29 4.8
SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7) 29 4.8
SB_47989| Best HMM Match : Filament (HMM E-Value=0.27) 29 4.8
SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_34249| Best HMM Match : fn3 (HMM E-Value=0) 28 6.3
SB_7395| Best HMM Match : SURF6 (HMM E-Value=1.8) 28 6.3
SB_8398| Best HMM Match : Neuromodulin (HMM E-Value=8.4) 28 8.4
SB_4126| Best HMM Match : DUF936 (HMM E-Value=5.4) 28 8.4
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 28 8.4
SB_12463| Best HMM Match : IPP-2 (HMM E-Value=1.2e-27) 28 8.4
SB_1597| Best HMM Match : PHD (HMM E-Value=1.4e-05) 28 8.4
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 37.9 bits (84), Expect = 0.008
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = +3
Query: 57 CFLYLSTLMDA*GLNNVRERKHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQST 236
C L L + A L R+ + L+ R+ + + + AR + + +
Sbjct: 37 CALLLEQQVQARDLQRERKMVEKMNIELSNARERIQKEKGSTKTTARELRKANKRAAKFE 96
Query: 237 WRTAC-QEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLT 413
+ C +E+LK + L ++ N VST + I KK S KK+S+SPE+ T
Sbjct: 97 IQVNCLKEELKSLNKQLKQVSSG--NSLKVSTVRRMTQIKKKPSQRDKKQSASPEIDTAH 154
Query: 414 QVGLETKQD 440
+G + D
Sbjct: 155 LLGESSDSD 163
>SB_10121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRK-NRSCKENDDD*HYRRNAGT*GRLDD 571
R+D R + N D T DD GR + NDD+ R + GR DD
Sbjct: 60 RNDEKRTGRNDEKRTGRNDDERTGRNDDERTGRNDDERTGRNDDERTGRNDEKRTGRNDD 119
Query: 572 SQXGLT---KMGLNDRKKTGAGVSRR 640
+ G + G ND K+TG R
Sbjct: 120 ERTGRNDEKRTGRNDEKRTGRNDEER 145
Score = 31.9 bits (69), Expect = 0.51
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKN-RSCKENDDD*HYRRNAGT*GRLDD 571
R+D R D N D T DD GR + + NDD+ R + GR D+
Sbjct: 76 RNDDERTGRNDDERTGRNDDERTGRNDDERTGRNDEKRTGRNDDERTGRNDEKRTGRNDE 135
Query: 572 SQXGLT---KMGLNDRKKTGAGVSRR 640
+ G + G ND ++TG R
Sbjct: 136 KRTGRNDEERTGRNDDERTGRNDEER 161
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRS-CKENDDD*HYRRNAGT*GRLDD 571
R+D R D N + T DD GR + NDD+ R + GR DD
Sbjct: 188 RNDEKRTGRNDDERTGRNDEERTGRNDDERTGRNDEERTGRNDDERTGRNDEERTGRNDD 247
Query: 572 SQXGLTKMGLNDRKKTGAGVSRR 640
+ G ND ++TG R
Sbjct: 248 E-----RTGRNDEERTGRNYEER 265
>SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1660
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/103 (23%), Positives = 50/103 (48%)
Frame = +3
Query: 102 NVRERKHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKEATEN 281
N +RK + G+ R+S ++ + + I ++ + R A +E L+ ++EN
Sbjct: 1120 NYNDRKRDGKKGIDGKRERLSSSRSDDF---QQSKMIKHSHLEKSLRQAMRE-LEHSSEN 1175
Query: 282 LDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITL 410
E RK ++ + K+KHG+ K ++KR +V+++
Sbjct: 1176 SSEEEKRKVRKKKLVEFKNKHGLDVKKMDESEKRKKVQQVMSM 1218
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 31.5 bits (68), Expect = 0.68
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 8/169 (4%)
Frame = +3
Query: 96 LNNVRER-KHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKEA 272
LN+++ER + R+ + G V+ Q+++ +A A R + A + DLKE
Sbjct: 2793 LNDLQERYEKRQAEQEMGSKNTVTSKQELTIAMATAADRQKVIYSLEQEKQALEHDLKET 2852
Query: 273 TENLDEIRD-----RKENERAVSTEKHKHGITKKLSSITK--KRSSSPEVITLTQVGLET 431
++L +RD ++E + S + G + L S + KR + V TQ+
Sbjct: 2853 RKSLSGVRDDLERVKREARESKSQLEELRGRVEDLESAEEFFKRENERLVRENTQLETSY 2912
Query: 432 KQDTVTPIPVQVASTTDLVAEKIEAVKRMTMISITEEMPEPRDVLMIPK 578
K+ T + T ++ +A + + M I E + +D L+ K
Sbjct: 2913 KESTYILETFKSEKETVILESVQDASEMIEMDEIQVENDKLKDELVYVK 2961
>SB_56089| Best HMM Match : CLN3 (HMM E-Value=9.8e-07)
Length = 554
Score = 31.1 bits (67), Expect = 0.90
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +3
Query: 213 TSQTIQSTWRTAC--QEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRS 386
T +T+ +W C + + + + D+K +VS+EKH + L + S
Sbjct: 27 TEETV--SWNQDCINESQISGNEASRNHSNDQKNEPESVSSEKHLLSQMENLEKEQENSS 84
Query: 387 SSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKRM 518
E + Q +++ D +PV+VA L K E +K +
Sbjct: 85 HVTEERSSLQPNVDSPPDQTDDVPVEVAE-DPLALPKNEVLKEV 127
>SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11)
Length = 461
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Frame = +3
Query: 114 RKHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQ---EDLKEATENL 284
+K R + G C + + IARV HR+T +++ W CQ LK A
Sbjct: 20 KKKRELQSFLGLCTYYRKYVKMFADIARVLHRLTEKSVPFEWTDECQTAFTSLKTALTTA 79
Query: 285 DEIR-DRKENERAVSTEKHKHGITKKLSSI 371
+ E + + T+ I +LS +
Sbjct: 80 PVLAYPTAEGDSVLDTDASADSIDAELSQV 109
>SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38)
Length = 667
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +3
Query: 366 SITKKRSSSPEVITLTQVGLETKQDTVTPIPV--QVASTTDL-VAEKIEAVKRMTMISIT 536
S T K S + T Q+ + K+ T T +P+ Q+ +T + + EK K+ + IT
Sbjct: 262 STTNKMPMSEKKPTTKQLPITEKKPTTTKLPMTEQIPTTNKMPMTEKKPTTKQ---LPIT 318
Query: 537 EEMPEPRDVLMIPKXVLRKWV*TTERKP 620
E+ P + M + K TE+KP
Sbjct: 319 EKKPTTTKLPMTEQIPTTKQTAMTEKKP 346
>SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 309 NERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVA 470
N R+VST K G TK +SSSP + ++K +T +PI V V+
Sbjct: 1165 NLRSVSTSKKDGGGRNNSLKRTKCKSSSPRKLQKITTPEKSKLETQSPIKVDVS 1218
>SB_46611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +3
Query: 228 QSTWRTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVIT 407
Q +TA +D +E E E + ENE + + L I +KR +S + +T
Sbjct: 26 QGNVKTARSDDKQEEREK--ERNKKPENEEEFIKKLSDPSLKSSLEKIIQKRRNSVKFVT 83
Query: 408 LTQVGLET-KQDTVTPIPVQVASTTDLVAEKIEAVKRMTMISITE 539
L G+ + + + + S ++ ++E K T+ + +E
Sbjct: 84 LQSGGIRVINHEDLCSVITEEESKISVLESEVEQRKTPTLDTSSE 128
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/100 (23%), Positives = 46/100 (46%)
Frame = +3
Query: 96 LNNVRERKHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKEAT 275
L ++ ++ + + RL R + + + + + Q +++ T QE LK A
Sbjct: 233 LAHLERKQMKEMQRLERRRQNIERRTSTVQEHSEKQQAVLEQCLKTRRNTLYQEFLK-AE 291
Query: 276 ENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSP 395
E + +R++KE E +KH+ I + +S+ R S P
Sbjct: 292 EFMQHLREKKERELNEWRQKHER-IRSRTNSLPAFRRSHP 330
>SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 822
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +3
Query: 240 RTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSS-SPEVITLTQ 416
R ++D K E ++ + KENE+ EK +K +TK+ S +P+ T
Sbjct: 96 RNKQKQDQKNGKEVPEKGGEEKENEKEKENEKRTEKAKEKDVQVTKQNESINPDSPFSTL 155
Query: 417 VGLET-KQDTVTPIPVQVASTT 479
V + T K + +P ++ TT
Sbjct: 156 VKMSTGKNPSTFQLPPELKCTT 177
>SB_41840| Best HMM Match : Omega_Repress (HMM E-Value=2)
Length = 300
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Frame = +3
Query: 318 AVSTEKHKHGIT-----KKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVASTTD 482
++S ++ H +T K+L ++T S E+ T+T + ++ + TVT I +Q T
Sbjct: 57 SISMQEELHTVTSISMQKELHTVTSI-SMQEELHTVTSISMQEELHTVTSISMQEELHTV 115
Query: 483 LVAEKIEAVKRMTMISITEEMPEPRDVLMIPKXVLRKW 596
+ + +T IS+ EE+ + P + K+
Sbjct: 116 TSISMQKELHTVTSISMQEELHTVTSIKRAPYCHINKY 153
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 384 SSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKRMTMISITEEM 545
S E+ T+T + ++ + TVT I +Q T E + +T IS+ EE+
Sbjct: 47 SMQEELYTVTSISMQEELHTVTSISMQKELHTVTSISMQEELHTVTSISMQEEL 100
>SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39)
Length = 566
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/81 (24%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +3
Query: 312 ERAVSTEKHKHGITKKLSSITKK-RSSSPEVITLTQ--VGLETKQDTVTPIPVQVASTTD 482
++ +S K +TKKL S+TKK S + ++++LT+ + L K ++T P+ +
Sbjct: 209 KKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKPLSLTKKPL 268
Query: 483 LVAEKIEAVKRMTMISITEEM 545
+ +K++++ + ++S+T+++
Sbjct: 269 SLTKKLQSLTK-KLVSLTKKL 288
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 183 T*IARVAHRITSQ-TIQSTWRTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGITKK 359
T +++VA + T +S W + ++ + + E + K+N++ S+ K K K
Sbjct: 570 TEVSKVAGEMWKNLTDKSKWEEKAAIEKQKYVQRMKEYNENKKNDKEESSPKKKSPSKKA 629
Query: 360 LSSITKKRSSSP 395
+ +++SSSP
Sbjct: 630 SKAPKEEKSSSP 641
>SB_55434| Best HMM Match : Flocculin (HMM E-Value=6.7)
Length = 96
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +3
Query: 318 AVSTEKHKHGIT-----KKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVASTTD 482
++S +K H T K+L ++T S E+ T+T + ++ + TVT I +Q T
Sbjct: 10 SISMQKELHTATSISMQKELHTVTSI-SMQKELSTVTSISMQKELHTVTSISMQKELHTV 68
Query: 483 LVAEKIEAVKRMTMISITEEM 545
+ + +T IS+ EE+
Sbjct: 69 TSISMQKELSTVTSISMQEEL 89
>SB_40142| Best HMM Match : DUF827 (HMM E-Value=1.2)
Length = 334
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
Frame = +3
Query: 216 SQTIQSTWRTA-CQEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSS 392
+QT+Q + Q D + T+N + ++E + K+ HG+ KK +K+ +
Sbjct: 73 NQTLQRKMKELEYQNDRFKVTQNQLKTELKREKDMV----KYLHGLAKKHERTIQKKDAE 128
Query: 393 PEVITLTQVGLETK-QDTVTPIPVQVASTTDLVAEKIEAVKRMTMISITEEMPEPRDVLM 569
++ ETK D P+P + + EK + + I + E + +
Sbjct: 129 SRLLRREVREAETKPSDEPPPLPERTDRLERIAREKTLTLDNLDSIDARDRAKEKERIPL 188
Query: 570 IP 575
P
Sbjct: 189 TP 190
>SB_19256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 204 HRITSQTIQSTWRTACQEDLKEATENLDEIRDRKENERAVSTEKHKH-GITKKLSSITKK 380
H I ++ S R A + ++E TE LD+I R + + HK G T+ ++I +
Sbjct: 204 HEIDAKRADSEIRRA-ESKIREVTEKLDDIASRVRHLKVEQDRSHKELGETRSTTAIVMQ 262
Query: 381 RSSS-PEVITLT 413
+ E+I LT
Sbjct: 263 AVAFWEELIELT 274
>SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 596 GLNDRKKTGAGVSRRQFKFARGGSQ-KFFTEPV 691
G +KK GV + KFARGG+Q + F PV
Sbjct: 64 GRGRKKKVKKGVDPEKLKFARGGTQWEGFNAPV 96
>SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)
Length = 661
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +3
Query: 189 IARVAHRITSQTIQSTWRTACQEDLKEATENLDEIRDR--KENERAVSTEKHKHGITKKL 362
+ +VAH++T + + +E K + LDEI +R +E RA + + K+
Sbjct: 471 LKQVAHQLTGIPMGEDVPASLKEAFKILPDTLDEIDERINEEQARAECNYQTDPNVIKEY 530
Query: 363 SSITKKRSSSPEVITLTQVGLETKQDTV 446
S K+ S I + L KQ +
Sbjct: 531 ESRDKEIKSMSGQIDAQESNLAAKQQQI 558
>SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7)
Length = 272
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/89 (26%), Positives = 40/89 (44%)
Frame = +3
Query: 279 NLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIP 458
N D+ + EN+R +K + + K +I + S E VG + + +T P
Sbjct: 46 NPDKSENTHENQRQNRNDKDPYYV--KTGAIAMETEES-ETCAGDMVGNQDSESLLTAPP 102
Query: 459 VQVASTTDLVAEKIEAVKRMTMISITEEM 545
Q D+ AEKI A + T+ T+E+
Sbjct: 103 AQKNVEEDVNAEKIIADQVRTIFDETKEI 131
>SB_47989| Best HMM Match : Filament (HMM E-Value=0.27)
Length = 366
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3
Query: 258 DLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKK-RSSSPEVITLTQVGLETK 434
DL+ E L+E+R R+EN + E+ + G+ ++ + K + E T +
Sbjct: 155 DLRAIAEALNELRQRQENSTKENNERFQ-GLQSSINDLVMKFEKYNTEQHTSIEKLKGQA 213
Query: 435 QDTVTPIPVQVASTTDLVAEKIEAVKRMT 521
D VT + + S + V I + ++ T
Sbjct: 214 DDQVTRLDSKTKSAVEDVRANITSTRQWT 242
>SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 255 EDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSS 389
++ K++ E + R R E +R S K + TK+ S TK+R S
Sbjct: 227 KEAKQSFEGSETKRRRSETKRRRSETKRRRSETKRRRSETKRRRS 271
>SB_34249| Best HMM Match : fn3 (HMM E-Value=0)
Length = 2195
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -2
Query: 685 LREKLLGTAPGEFKLAAGNPRPGFLSVVQTHFRKTXLGIIKTSLGSGISSVMLIIVILFT 506
LRE+ G FKL A +P+ + ++ F +L SGI M +
Sbjct: 1733 LRERFFGPNATSFKLPALDPKTDYTVLLTVAFLGGLTATTNLTLNSGIEGAMEAV----P 1788
Query: 505 ASIFSATRSVVDA 467
S+ S +R VD+
Sbjct: 1789 GSVKSVSRQSVDS 1801
>SB_7395| Best HMM Match : SURF6 (HMM E-Value=1.8)
Length = 1365
Score = 28.3 bits (60), Expect = 6.3
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +3
Query: 246 ACQEDL--KEATENLDEIRDRKE--NERAVSTEKHKHGITKKLSSITKKRSSSPEVITLT 413
A ++DL KE + E+ + E N VST+K G SS+ RSS E
Sbjct: 415 AARDDLADKERLPSHSELSPKSERANNEVVSTDKDGRGAPVSPSSLGLYRSS--ESADED 472
Query: 414 QVGLETKQ--DTVTPIPVQVASTTDLVAEKIE 503
+VGL T++ +++ + + DL+ E IE
Sbjct: 473 KVGLLTRKRNESMKRLKEKAKVDLDLITEDIE 504
>SB_8398| Best HMM Match : Neuromodulin (HMM E-Value=8.4)
Length = 234
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/89 (26%), Positives = 40/89 (44%)
Frame = +3
Query: 279 NLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIP 458
N D+ + EN+R +K + + K +I + S E VG + + +T P
Sbjct: 86 NPDKSENTHENQRQNRNDKDPYYV--KTGAIAMETEES-ETCAGDMVGNQDSESLLTAPP 142
Query: 459 VQVASTTDLVAEKIEAVKRMTMISITEEM 545
Q D+ AEKI A + T+ T+E+
Sbjct: 143 AQKNVEEDVNAEKIIADQVRTISDETKEI 171
>SB_4126| Best HMM Match : DUF936 (HMM E-Value=5.4)
Length = 449
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 237 WRTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQ 416
W T + L+ + + R+ KEN+ +T+K KH T + ++ K S T+
Sbjct: 290 WSTGTR--LQNTSARVKPQRNDKENKPKSNTKKRKH--TNRPNNSRKDSKSGSARGTIQD 345
Query: 417 VGLETKQDTVT 449
+ LE D++T
Sbjct: 346 ITLECSFDSIT 356
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = +3
Query: 153 RRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKEATENLDEIRDRKENERAVSTE 332
R + D +T RVAH ++ ++ A +E + E+R E ER
Sbjct: 610 REIGIVHDHTTREVRVAHEEATREVRVAHEQATREVRITHEQATREVRVAHEQERIA--- 666
Query: 333 KHKHGITK-KLSSITKKRSSSPEVITLTQVGLETKQ 437
+ HG + K+S+ KK LT V + Q
Sbjct: 667 -YDHGTREAKISATAKKNLEKARAAELTAVNQQATQ 701
>SB_12463| Best HMM Match : IPP-2 (HMM E-Value=1.2e-27)
Length = 197
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 204 HRITSQTIQSTWRTACQEDLKEATENLDEIRDRKENE 314
HR+ Q + +W +ED +E ENL E K+ E
Sbjct: 114 HRMQDQPRRKSWEDTPEEDEEEDDENLTEEERLKKKE 150
>SB_1597| Best HMM Match : PHD (HMM E-Value=1.4e-05)
Length = 763
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 264 KEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKR 383
K E LD+ +DR EN A + GI +KL TKKR
Sbjct: 467 KRLKEKLDK-QDRPENCPAAKATRVNPGIWRKLREHTKKR 505
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,286,322
Number of Sequences: 59808
Number of extensions: 484215
Number of successful extensions: 2024
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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