Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0127
(449 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 103 7e-23
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 35 0.027
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 35 0.036
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 32 0.25
SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 30 1.0
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 29 1.3
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 29 1.3
SB_42989| Best HMM Match : HdeA (HMM E-Value=9.6) 29 1.8
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 3.1
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17) 28 4.1
SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 27 5.4
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 27 5.4
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 27 5.4
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 27 5.4
SB_14341| Best HMM Match : DUF1339 (HMM E-Value=4.4) 27 5.4
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 27 5.4
SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 27 7.2
SB_56636| Best HMM Match : Toxin_4 (HMM E-Value=2.4) 27 9.5
SB_10758| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22) 27 9.5
SB_44405| Best HMM Match : Extensin_2 (HMM E-Value=4.5) 27 9.5
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 103 bits (247), Expect = 7e-23
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = +3
Query: 255 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXAPTKPWR 395
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM APTK WR
Sbjct: 60 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWR 106
Score = 74.5 bits (175), Expect = 4e-14
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +1
Query: 76 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 255
ARP+++V++E E+ LP VFKAPIRPDLVN VH +++KN RQPY V+K AGHQT
Sbjct: 2 ARPVITVFNENGESA--GQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLAGHQT 59
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 35.1 bits (77), Expect = 0.027
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -3
Query: 408 TVPAPARASWGRTYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 271
T+P+P+ + R + HH + H + +HHH H H +
Sbjct: 198 TMPSPSIVIYRRHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 34.7 bits (76), Expect = 0.036
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 237 GGWSPNSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXAPTKPW 392
GGW WG G+ + R GGG R G +G M GG P W
Sbjct: 258 GGWGQGPGGGWGRGQG-RGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGW 308
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 31.9 bits (69), Expect = 0.25
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 375 RTYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 256
R Y HH C H Y Y+ H H + + H YP RH
Sbjct: 15 RCYRHHHYCCYCH--HRYCYYRHHHYCWYRHHYHYPCYRH 52
>SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.9 bits (64), Expect = 1.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 322 WVPPPRTRGIRATARPVPHD 263
W+PP RTR R T PV H+
Sbjct: 228 WMPPVRTRPARPTVMPVTHE 247
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 249 PNSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 368
P +E +G ++ R PR RGGG G G G RGGR
Sbjct: 982 PTPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +3
Query: 237 GGWSPNSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 365
GGW S WG G R +GGG R G +G GG
Sbjct: 6 GGWGRGSGGGWGQGPG-GGWGRGQGGGMGRGPGGGWGRGSGGG 47
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = +3
Query: 237 GGWSPNSAESWGT--GRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXAPTKPW 392
GG WG G + R P GGG R G +G M GG P + W
Sbjct: 54 GGMGRGPGGGWGRMQGGGMGRGP---GGGLGRGPGGGWGRMQEGGMGRGPGQGW 104
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 363 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 271
HH RH R + +HHH H E+ ++H RY
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRH-RY 353
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 348 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 256
YR H + +HHH H Q+H RH
Sbjct: 307 YRYHHHHHHRHHHHHHHHHHQRHRHRHRHRH 337
>SB_42989| Best HMM Match : HdeA (HMM E-Value=9.6)
Length = 235
Score = 29.1 bits (62), Expect = 1.8
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +3
Query: 201 VQELEAALLREQGGWSPNSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXAP 380
V EL A + R+Q G S E+ R IP+ R GT R+ Q +C
Sbjct: 141 VSELLAQVSRDQAGTGTYSVEALENKRVAVDIPK-RLTGTARAQQEVAPALC-------- 191
Query: 381 TKPWRALAPSRQ-XPTSXNGPW 443
W PS PTS +G W
Sbjct: 192 -TVWACAQPSHAVRPTSSHGAW 212
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 372 TYVHHDTCYRRHPDRTYGYHHHGHA 298
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 348 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 256
Y +HP T+ YHH H + ++ ++P + H
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTH 442
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 348 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 256
Y +HP T+ YH H + H ++P + H
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTH 261
>SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 174 PGQ*CSRFYVQELEAALLREQG-GWSPNSAESWGTGRAVARIPRVRGGGT 320
P Q C + E+ +L G G P AE G ARI +RG GT
Sbjct: 596 PAQPCKHLHSYTFESNILGNTGTGGYPGFAERGGRASYQARIQDLRGKGT 645
>SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 426 MSEXDATVPAPARASWGRTYVH-HDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 271
M++ T P + R Y H CYRR R + YHHH + +RY
Sbjct: 199 MTKNPITSPDKVSSLPLRCYYHCRRRCYRRR--RRHFYHHHPRRYHNHRRLRY 249
>SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1725
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 142 PFVFKAPIRPDLVNDVHVSMSKNSRQ--PYCVSKEAGHQTVPNHGVPDVLLP 291
PF F P+R +L+N++H+ ++ ++ + P+ G Q V N GV +P
Sbjct: 1264 PFYF--PLRLELINEIHLYITDDTGRTIPFLSGGFEGSQQVANPGVGLFTMP 1313
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 143 GRGLAAPCTVSLFSEYTDTKGRATDRLI 60
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17)
Length = 278
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 354 TCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHCLVTSLL 235
TC+ HP + Y H+ H F Q H + RH L TS L
Sbjct: 52 TCFPYHPHYHHHYRHNDH-YFHQDH----LYRHYLSTSAL 86
>SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 405 VPAPARASWGRTYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHCLVTS-LLAH 229
V A + R +H+ T R+ + Y HH HA + R+ M + L T L H
Sbjct: 1002 VHASYNSHTARHTMHYYTLTTRYTIQ-YDTVHHVHASYNSHTARHTMHYYTLTTRYTLKH 1060
Query: 228 AVGLPRVLGHRN 193
A P +L N
Sbjct: 1061 AYETPLILNDIN 1072
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 367 RPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHD 263
RPP H + P PD WVP P R +P D
Sbjct: 250 RPPPHHDMRGP-PDQWVPGPEQRRDNMRGPGMPPD 283
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 363 HHDTCYRRHPDRTYGYHHH 307
HH YR H + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 363 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHCLVTSLL 235
HH + RH R + YHHH + H +P VT+++
Sbjct: 570 HHHLHHHRHHHRHHHYHHHHY----PHHHHHPCTIIIFVTTII 608
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 400 SARQGFVGAXIRPPRHMLPKAP*PDLWVPPP 308
+A F G +RPPRH+ ++P P PPP
Sbjct: 316 TALAAFAGPTLRPPRHLPWQSPPPP---PPP 343
>SB_14341| Best HMM Match : DUF1339 (HMM E-Value=4.4)
Length = 801
Score = 27.5 bits (58), Expect = 5.4
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 267 WGTGRAVARIPRVRGGGTHRS-GQGAFG-NMCRGGRMXAPTKPWRALAPSRQXPTS 428
W T R VA RVR G R QGA G + GR +P A AP + T+
Sbjct: 270 WATARVVAGRKRVRATGPRRGWSQGARGLGLLGHGRADIEPRPC-ACAPRHRAATT 324
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 369 YVHHDTCYRRHPDRTYGYHHHGH 301
Y HH +RR R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
>SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 372 TYVHHDTCYRRHPDRTYGYHHHGHA 298
TY H DT +HPD H HA
Sbjct: 323 TYTHQDTQMHKHPDTQMYVHAPRHA 347
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 363 HHDTCYRRHPDRTYGYHHHGH 301
HH + RH DR + + HH H
Sbjct: 340 HHRNKHYRHHDRNHHHRHHHH 360
>SB_56636| Best HMM Match : Toxin_4 (HMM E-Value=2.4)
Length = 434
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 228 REQGGWSPNSAESWGTGRAVARIPRVRGGG 317
R + W P + +W +A+ P VR GG
Sbjct: 120 RPEAAWGPKRSGAWLGSQALVPQPAVRSGG 149
>SB_10758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 26.6 bits (56), Expect = 9.5
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +1
Query: 52 SSEMSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY-- 225
S +M L R + Y+E ++ + LP V AP+ D+V +V S K S + Y
Sbjct: 475 SPQMPLDFPRSFLEDYAEACANLK---QSLPQVHLAPLASDIVREVESSEVKLSLKFYVS 531
Query: 226 --CVSKEAGHQTV 258
C S EA +T+
Sbjct: 532 ENCPSVEAVVKTL 544
>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
Length = 595
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 273 TGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 368
+G ++ R PR RGGG G G G RGGR
Sbjct: 501 SGSSIVRRPRRRRGGGGGGGGGGGGGGGGRGGR 533
>SB_44405| Best HMM Match : Extensin_2 (HMM E-Value=4.5)
Length = 325
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -3
Query: 369 YVHHDTCYRRH-PDRTYGYHHHGHAEFGQQH 280
Y HH Y H P Y +HHH H + QQH
Sbjct: 297 YHHHHPPYHYHYPPLPYRHHHH-HNRY-QQH 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,077,899
Number of Sequences: 59808
Number of extensions: 317084
Number of successful extensions: 956
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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