Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0111
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 157 6e-39
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 157 8e-39
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 155 3e-38
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 154 4e-38
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 124 4e-29
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 79 3e-15
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 79 4e-15
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 78 6e-15
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 8e-15
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 76 2e-14
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 8e-14
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 71 5e-13
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 68 7e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 63 2e-10
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 54 1e-07
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 49 3e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 45 5e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 42 4e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 39 0.004
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 34 0.10
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 29 3.8
SB_23807| Best HMM Match : DUF885 (HMM E-Value=6.6e-16) 28 5.0
SB_5674| Best HMM Match : FlaC_arch (HMM E-Value=0.97) 28 5.0
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 28 6.6
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 157 bits (381), Expect = 6e-39
Identities = 76/91 (83%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR ILV LEPGTMDSVRSGPFGQIFRPDNF F Q GAGNNWAKGHYTEGA LVDSV+DVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAESCDCLQGFQLTHSL GTLL
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLL 151
Score = 129 bits (311), Expect = 2e-30
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH QAGQCGNQIGAKFWE+ISD HGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDRIMNT+SVVPSP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP 173
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 157 bits (380), Expect = 8e-39
Identities = 75/91 (82%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +LV LEPGTMDSVRSGPFGQIFRPDNF F Q GAGNNWAKGHYTEGA LVDSV+DVV
Sbjct: 274 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 333
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAESCDCLQGFQLTHSL GTLL
Sbjct: 334 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLL 364
Score = 134 bits (324), Expect = 5e-32
Identities = 60/71 (84%), Positives = 63/71 (88%)
Frame = +1
Query: 40 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYY 219
+YSS KMREIVH QAGQCGNQIGAKFWE+ISD HGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 220 NEASGGKYVXR 252
NEA+GGKYV R
Sbjct: 265 NEATGGKYVPR 275
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDRIMNT+SVVPSP
Sbjct: 353 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP 386
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 155 bits (375), Expect = 3e-38
Identities = 75/100 (75%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +LV LEPGTMDSVRSGPFGQIFRPDNF F Q GAGNNWAKGHYTEGA LVDSV+DVV
Sbjct: 6 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 65
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLLHLQNQRRVP 545
RKEAESCDC+QGFQLTHSL TLL L+ + P
Sbjct: 66 RKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYP 105
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M I KIREEYPDRIMNT+SVVPSP
Sbjct: 85 GGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSP 118
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 154 bits (374), Expect = 4e-38
Identities = 72/91 (79%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +L+ LEPGTMDSVRSGPFGQIFRPDNF F Q GAGNNWAKGHYTEGA L+DSV+DVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAESCDC+QGFQLTHSL GTLL
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLL 151
Score = 126 bits (305), Expect = 1e-29
Identities = 55/62 (88%), Positives = 58/62 (93%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIV +QAGQCGNQIGAKFWE+ISD HGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 57.6 bits (133), Expect = 7e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDRIMNT+S+VPSP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSP 173
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 129 bits (311), Expect = 2e-30
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH QAGQCGNQIGAKFWE+ISD HGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/32 (90%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXF 341
PR ILV LEPGTMDSVRSGPFGQIFRPDNF F
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 124 bits (300), Expect = 4e-29
Identities = 57/91 (62%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR ILV LEPGTMD+VR GP G +FRPDNF Q GA NNWAKGHY+EGA L+D++ DV+
Sbjct: 17 PRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVL 76
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+CDC+QG QL +L GTL+
Sbjct: 77 RKEAENCDCMQGVQLIQALGGGTGSGLGTLI 107
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS + +SKIREEYPDRI++ +SVVPSP
Sbjct: 96 GGGTGSGLGTLILSKIREEYPDRILSAFSVVPSP 129
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G L+D V+D +
Sbjct: 648 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRI 707
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A+ C LQGF + HS + +LL
Sbjct: 708 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLL 738
Score = 78.2 bits (184), Expect = 5e-15
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD V+D +
Sbjct: 127 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 186
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A+ C LQGF + HS + +LL
Sbjct: 187 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLL 217
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
+RE + I GQ G QIG WE+ HGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 241 YVXR 252
+V R
Sbjct: 646 HVPR 649
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ HGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 244 VXR 252
V R
Sbjct: 574 VPR 576
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + + GQ G QIG WE+ HGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 244 VXR 252
V R
Sbjct: 126 VPR 128
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD V+D +
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRI 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A+ C LQGF + HS + +LL
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLL 153
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD V+D +
Sbjct: 496 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRI 555
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A+ C LQGF + HS + +LL
Sbjct: 556 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLL 586
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G QIG WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ HGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 244 VXR 252
V R
Sbjct: 495 VPR 497
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 77.8 bits (183), Expect = 6e-15
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G ++D V+D +
Sbjct: 62 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRI 121
Query: 426 RKEAESCDCLQGFQLTHS 479
RK A+ C LQGF + HS
Sbjct: 122 RKLADQCTGLQGFLIFHS 139
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ HGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 244 VXR 252
V R
Sbjct: 61 VPR 63
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 77.4 bits (182), Expect = 8e-15
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D +R+G + Q+F P+ + A NN+A+GHYT G +D+V+D +
Sbjct: 481 PRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRI 540
Query: 426 RKEAESCDCLQGFQLTHS 479
RK A+ C LQGF + HS
Sbjct: 541 RKLADQCSGLQGFLVFHS 558
Score = 74.5 bits (175), Expect = 6e-14
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + LEP +D VR+G + Q+F P+ + A NN+A+GHYT G L++ V+D +
Sbjct: 48 PRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRL 107
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A+ C LQGF + HS + +LL
Sbjct: 108 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLL 138
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE V I GQ G Q+G WE+ HGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 244 VXR 252
V R
Sbjct: 480 VPR 482
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 112 IGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVXR 252
+G WE+ HGI P G D + + N +++E GK+V R
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 49
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + LEP +D VR+G + Q+F P+ + A NN+A+GHYT G ++D+V+D +
Sbjct: 63 PRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRL 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A+ C LQGF + HS + +LL
Sbjct: 123 RKLADGCTGLQGFLIFHSFGGGTGSGFSSLL 153
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + + GQ G Q+G WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + LEP +D VR+G + Q+F P+ + A NN+A+GHYT G ++D V+D +
Sbjct: 867 PRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRI 926
Query: 426 RKEAESCDCLQGFQLTHS 479
RK A+ C LQGF + HS
Sbjct: 927 RKLADQCTGLQGFLIFHS 944
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +D V+D +
Sbjct: 434 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRL 493
Query: 426 RKEAESCDCLQGFQLTHS 479
RK A+ C LQGF + HS
Sbjct: 494 RKLADGCTGLQGFLIFHS 511
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ HGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 244 VXR 252
V R
Sbjct: 433 VPR 435
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + + GQ G Q+G WE+ HGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 244 VXR 252
V R
Sbjct: 866 VPR 868
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G ++D V+D
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRC 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A+ C LQGF + HS + +LL
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFASLL 153
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 74.1 bits (174), Expect = 8e-14
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D +R+G + Q+F P+ + A NN+A+GHYT G +D +D +
Sbjct: 28 PRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRI 87
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A+ C LQGF + HS + +LL
Sbjct: 88 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLL 118
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +LV LEP +D VR+G + ++ P+ + A NN+A+GHYT G +V+ V+D +
Sbjct: 974 PRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKI 1033
Query: 426 RKEAESCDCLQGFQLTHS 479
RK + C LQGF + HS
Sbjct: 1034 RKMTDQCSGLQGFLIFHS 1051
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 71.3 bits (167), Expect = 5e-13
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = +3
Query: 345 QXGAGNNWAKGHYTEGAXLVDSVIDVVRKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
Q A NNWAKG YTEGA L+DS +D +RK AE+CD +QGFQ+ HSL G+LL
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLL 59
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS + +SKIREEYPDR+++++ V+PSP
Sbjct: 48 GGGTGSGLGSLLLSKIREEYPDRLVSSFCVLPSP 81
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +3
Query: 285 DSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVVRKEAESCDCLQGF 464
D VR+G + Q+F P+ + A NN+A+GHYT G L+D V+D +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 465 QLTHSLXRXHRFXYGTLL 518
+ HS + +LL
Sbjct: 73 LIFHSFGGGTGSGFSSLL 90
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 67.7 bits (158), Expect = 7e-12
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVVRKEAESCDCLQGFQL 470
VR+G + Q+F P+ + A NN+A+GHYT G L+D V+D +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 471 THSLXRXHRFXYGTLL 518
HS + +LL
Sbjct: 63 FHSFGGGTGSGFSSLL 78
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVVRKEAESCDCLQGFQL 470
+R+G + Q+F P+ + A NN+A+GHYT G +D +D +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 471 THSLXRXHRFXYGTLL 518
HS + +LL
Sbjct: 63 FHSFGGGTGSGFSSLL 78
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +3
Query: 324 PDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVVRKEAESCDCLQGFQLTHSLXRXHRFX 503
P+ + A NN+A+GHYT G VD V+D +RK A+ C LQGF + HS
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSG 138
Query: 504 YGTLL 518
+ +LL
Sbjct: 139 FSSLL 143
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G QIG WE+ HGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVVRK 431
VR+G + Q+F P+ + A NN+A+GHYT G L+D V+D +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 50.8 bits (116), Expect = 8e-07
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 240
MRE + + GQ G QIG WE+ HGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAXLVDSVIDVVRKEAESCDCLQGFQLTHSL 482
G+GNNWA G G +D V+D+V++E E CD L GF SL
Sbjct: 104 GSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGFLTLLSL 147
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 76 IVHIQAGQCGNQIGAKFWEII 138
IV +Q GQCGNQIG + +++I
Sbjct: 3 IVTLQLGQCGNQIGRELFDLI 23
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVVRK 431
VR G + +F PD + A NN+A+GHYT G +D ++ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLER----INVYYNEASG 234
MRE + I GQ G QIG WE+ HGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 235 GKY 243
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 124 FWEIISDXHGIDPTGAYHG-DSDLQLERINVYYNE 225
FWE+I++ HGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 423 VRKEAESCDCLQGFQLTHSLXRXHRFXYGTLL--HLQNQ 533
+RKEAE CD +QGFQL HSL GTL+ HLQ +
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEE 39
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS + + ++EEYPDRI+++ SV PSP
Sbjct: 21 GGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSP 54
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +3
Query: 321 RPDNFXFXQXGAGNNWAKGHYTE-----GAXLVDSVIDVVRKEAESCDCLQGFQLTHSL 482
R N + G GNN+A G++ G L+ +D +RKE E CD G + HSL
Sbjct: 65 RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAGTIVMHSL 123
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.9 bits (74), Expect = 0.10
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 234 RQVRAPRILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNW 368
+ ++A +L+ +E G ++++ GP +F G GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -3
Query: 461 SLEAITRFRFLSNDVDN*IDEXSTLRVVSLGPVVAGAXLSEXEVVRTEDLSERSRADRVH 282
S++A R R +S V I + V++L PV+ G +++ V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 281 GAGL 270
G+
Sbjct: 264 RCGI 267
>SB_23807| Best HMM Match : DUF885 (HMM E-Value=6.6e-16)
Length = 879
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +3
Query: 321 RPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVVRKE-----AESCDCLQGFQLTHSLX 485
RP+ + + G + W K H +G + DS++D + K + + L+G + H L
Sbjct: 295 RPEYYSELEEGVNDKWTKNH--KGMNVSDSILDALVKGLGQPLLDLINYLEGDHMRHCLP 352
Query: 486 RXHRFXYGTL 515
R G L
Sbjct: 353 NDFRSGLGGL 362
>SB_5674| Best HMM Match : FlaC_arch (HMM E-Value=0.97)
Length = 273
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 417 DVVRKEAESCDCLQGFQLTHSLXRXHRFXYGTLLHLQNQ 533
D+ K S DCL QL + H GT H+QN+
Sbjct: 191 DMENKSITSLDCLTKAQLVEECRKFHLRSTGTKDHMQNK 229
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 27.9 bits (59), Expect = 6.6
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -3
Query: 494 VXPPERVCQLESLEAITRFRFLSNDVDN*IDEXSTLRVVSLG-PVVAGAXLSE--XEVVR 324
V PP+ +LE L TRF L+ DVD L V++ G + +GA L E +
Sbjct: 260 VPPPDMKARLEILRVHTRFSPLAPDVD--------LSVIAEGTELYSGADLENLCRENLN 311
Query: 323 TEDLSERSRADRVHGAG 273
T+ SE RA H G
Sbjct: 312 TKLGSESVRASHEHSRG 328
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 27.5 bits (58), Expect = 8.7
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +1
Query: 514 SXISKIREEYPDRIMNTYSVVP 579
S + K++E+YPD I++++ + P
Sbjct: 482 SELKKLQEQYPDHILSSFELFP 503
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,816,937
Number of Sequences: 59808
Number of extensions: 274261
Number of successful extensions: 579
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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