Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0104
(717 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 176 1e-44
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 176 1e-44
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 171 6e-43
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 140 8e-34
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 130 8e-31
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 130 8e-31
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 5e-20
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 9e-20
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 93 2e-19
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 3e-19
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 93 3e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 5e-19
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 92 5e-19
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 91 6e-19
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 91 6e-19
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 8e-19
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 91 8e-19
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 91 8e-19
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 91 8e-19
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 89 4e-18
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 62 6e-10
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 57 2e-08
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 36 0.033
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 30 1.6
SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2) 29 3.8
SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7) 29 3.8
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 29 5.0
SB_41279| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 176 bits (429), Expect = 1e-44
Identities = 98/180 (54%), Positives = 115/180 (63%), Gaps = 4/180 (2%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP- 358
FDAKNMM ACDPRHGRYLTVA +FRG K++ + K + P +
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV 353
Query: 359 CVTYLRGVLKWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*GYDEMEFTE 529
C RG LK + + + +S + + + A +HW G DEMEFTE
Sbjct: 354 CDIPPRG-LKMSATFIGNSTAIQELFKR-ISEQFTAM-FRRKAFLHWYTGEGMDEMEFTE 410
Score = 160 bits (389), Expect = 9e-40
Identities = 77/111 (69%), Positives = 87/111 (78%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+GRMSMKEVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 433 FKRVSEQFVAMFRRKASCTGTLVRV**NGVHGRQSSNMNDLISEYQQYQDA 585
FKR+SEQF AMFRRKA SNMNDL+SEYQQYQDA
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 176 bits (429), Expect = 1e-44
Identities = 98/180 (54%), Positives = 115/180 (63%), Gaps = 4/180 (2%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP- 358
FDAKNMM ACDPRHGRYLTVA +FRG K++ + K + P +
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV 353
Query: 359 CVTYLRGVLKWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*GYDEMEFTE 529
C RG LK + + + +S + + + A +HW G DEMEFTE
Sbjct: 354 CDIPPRG-LKMSATFIGNSTAIQELFKR-ISEQFTAM-FRRKAFLHWYTGEGMDEMEFTE 410
Score = 160 bits (389), Expect = 9e-40
Identities = 77/111 (69%), Positives = 87/111 (78%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+GRMSMKEVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 433 FKRVSEQFVAMFRRKASCTGTLVRV**NGVHGRQSSNMNDLISEYQQYQDA 585
FKR+SEQF AMFRRKA SNMNDL+SEYQQYQDA
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 171 bits (415), Expect = 6e-43
Identities = 97/180 (53%), Positives = 113/180 (62%), Gaps = 4/180 (2%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRL F+ PGFAPLTSRG+QQYRALTVPELT QM
Sbjct: 179 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPELTQQM 238
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP- 358
FDAKNMM ACDP HGRYLTVA +FRG K+L + K + P +
Sbjct: 239 FDAKNMMAACDPLHGRYLTVAAMFRGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAV 298
Query: 359 CVTYLRGVLKWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKLLALVHW---*GYDEMEFTE 529
C RG LK + + + +S + + + A +HW G DEMEFTE
Sbjct: 299 CDIPPRG-LKMSATFIGNSTAIQELFKR-ISEQFTAM-FRRKAFLHWYTGEGMDEMEFTE 355
Score = 159 bits (386), Expect = 2e-39
Identities = 76/111 (68%), Positives = 87/111 (78%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+GRMSMKE+DEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 263 RGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 322
Query: 433 FKRVSEQFVAMFRRKASCTGTLVRV**NGVHGRQSSNMNDLISEYQQYQDA 585
FKR+SEQF AMFRRKA SNMNDL+SEYQQYQDA
Sbjct: 323 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 373
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 140 bits (340), Expect = 8e-34
Identities = 60/86 (69%), Positives = 74/86 (86%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+TTCLRFPGQLNADLRKLAVNM+P+PRLHF+ PGFAPLTSR YRALTV +LT +
Sbjct: 139 SGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECVSYRALTVADLTQAI 198
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRG 259
FD KN+++AC+P+ G+YLT A ++RG
Sbjct: 199 FDNKNLLIACNPKRGKYLTYAAMYRG 224
Score = 97.9 bits (233), Expect = 7e-21
Identities = 48/110 (43%), Positives = 72/110 (65%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G MSMKEV++Q+A Q++ S+ FV+WIPNN K+AVCD+PP +KM+++ I + TAIQ +
Sbjct: 223 RGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPHDMKMSASCISSNTAIQEL 282
Query: 433 FKRVSEQFVAMFRRKASCTGTLVRV**NGVHGRQSSNMNDLISEYQQYQD 582
FKR+ + MFRR+A + +++ DLIS YQQ +D
Sbjct: 283 FKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQCED 332
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 130 bits (315), Expect = 8e-31
Identities = 64/103 (62%), Positives = 73/103 (70%)
Frame = +1
Query: 277 VDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSEQF 456
VDEQ+ N QNKNS +FVEWIPNN K VCDI P+GLKMA+TF+GN TAIQ +FKRV EQF
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 150
Query: 457 VAMFRRKASCTGTLVRV**NGVHGRQSSNMNDLISEYQQYQDA 585
AMFRRKA SNM+DLI+EYQQYQ+A
Sbjct: 151 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEA 193
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 130 bits (315), Expect = 8e-31
Identities = 64/103 (62%), Positives = 73/103 (70%)
Frame = +1
Query: 277 VDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSEQF 456
VDEQ+ N QNKNS +FVEWIPNN K VCDI P+GLKMA+TF+GN TAIQ +FKRV EQF
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 212
Query: 457 VAMFRRKASCTGTLVRV**NGVHGRQSSNMNDLISEYQQYQDA 585
AMFRRKA SNM+DLI+EYQQYQ+A
Sbjct: 213 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEA 255
Score = 111 bits (268), Expect = 4e-25
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = +2
Query: 71 MVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFDAKNMMVACDPRHGRYLTVATI 250
MVPFPRLHF+ PGFAPL SR QQY+ ++V ELT QMFDA+NMM ACDPRHGRYLTVA I
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAAI 60
Query: 251 FRGE 262
FRG+
Sbjct: 61 FRGK 64
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 95.1 bits (226), Expect = 5e-20
Identities = 43/103 (41%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 221 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITTSC 280
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ +FRG+ + K + + +TK
Sbjct: 281 FEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTK 323
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/91 (38%), Positives = 53/91 (58%)
Frame = +2
Query: 38 LNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFDAKNMMVACDP 217
LN DL + N+VP+PR+HF +AP+ S + +TV +LT F+ N MV CDP
Sbjct: 664 LNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDP 723
Query: 218 RHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
RHG+Y+ +FRG+ + K + + +TK
Sbjct: 724 RHGKYMACCLLFRGDVVPKDVNAAIATIKTK 754
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMAS 396
C +G + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 301 CLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 360
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKA 480
+ NTTAI + R+ +F M+ ++A
Sbjct: 361 CMLSNTTAIAEAWARLDHKFDLMYAKRA 388
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMAS 396
C +G + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 732 CLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 791
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKA 480
+ NTTAI + R+ +F M+ ++A
Sbjct: 792 CMLSNTTAIAEAWARLDHKFDLMYAKRA 819
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 94.3 bits (224), Expect = 9e-20
Identities = 42/103 (40%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 607 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADITNSC 666
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + S +TK
Sbjct: 667 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTK 709
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/67 (43%), Positives = 38/67 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 1040 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNAC 1099
Query: 182 FDAKNMM 202
F+ N M
Sbjct: 1100 FEPANQM 1106
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 691 RGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 750
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKA 480
NTTAI + R+ +F M+ ++A
Sbjct: 751 NTTAIAEAWARLDHKFDLMYAKRA 774
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Frame = +1
Query: 226 EVFDRCDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RG 381
E+ + C + +M +V+ +A I+ K + FV+W P K+ + PP
Sbjct: 1094 EITNACFEPANQM---DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 1150
Query: 382 LKMASTFIGNTTAIQTIFKRVSEQFVAMFRRKA 480
++ A + NTTAI + R+ +F M+ ++A
Sbjct: 1151 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRA 1183
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/103 (40%), Positives = 61/103 (59%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + S+ +TK
Sbjct: 296 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSSIATIKTK 338
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 320 RGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKA 480
NTTAI + R+ +F M+ ++A
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRA 403
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 92.7 bits (220), Expect = 3e-19
Identities = 42/103 (40%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNAC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 338
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKA 480
NTTAI + R+ +F M+ ++A
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRA 403
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 92.7 bits (220), Expect = 3e-19
Identities = 42/103 (40%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 669 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNAC 728
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 729 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 771
Score = 91.1 bits (216), Expect = 8e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 338
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMAS 396
C +G + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKA 480
+ NTTA+ + R+ +F M+ ++A
Sbjct: 376 CMLSNTTAVAEAWARLDHKFDLMYAKRA 403
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 753 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 812
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKA 480
NTTAI + R+ +F M+ ++A
Sbjct: 813 NTTAIAEAWARLDHKFDLMYAKRA 836
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 91.9 bits (218), Expect = 5e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + +TV +LT
Sbjct: 201 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNAC 260
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 261 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 303
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 285 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 344
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKA 480
NTTAI + R+ +F M+ ++A
Sbjct: 345 NTTAIAEAWARLDHKFDLMYAKRA 368
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 91.9 bits (218), Expect = 5e-19
Identities = 42/103 (40%), Positives = 59/103 (57%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 161 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSC 220
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + R K
Sbjct: 221 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPK 263
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
+G + K+V+ +A I+ K + F +W P K+ + PP
Sbjct: 245 RGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINSQPP 285
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 91.5 bits (217), Expect = 6e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 34 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNAC 93
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 94 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 136
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRG--------LKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + P ++ + +
Sbjct: 118 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQQPTAVPGGDLAKVQRSVCMLS 177
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKA 480
NTTAI + R++ +F M+ ++A
Sbjct: 178 NTTAIADAWARLNHKFDLMYAKRA 201
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 91.5 bits (217), Expect = 6e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 235 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNAC 294
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 295 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 337
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTF 402
+G + K+V+ +A I+ K + FV+W P K+ + P A+ +
Sbjct: 319 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIRHKAPGHFSWATVY 368
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 91.1 bits (216), Expect = 8e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 173 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 232
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 233 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 275
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMAS 396
C +G + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 253 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 312
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKA 480
+ NTTAI + R+ +F M+ ++A
Sbjct: 313 CMLSNTTAIAEAWARLDHKFDLMYAKRA 340
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 91.1 bits (216), Expect = 8e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 300 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 359
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 360 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 402
Score = 91.1 bits (216), Expect = 8e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 821 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 880
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 881 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 923
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 905 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 964
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKA 480
NTTAI + R+ +F M+ ++A
Sbjct: 965 NTTAIAEAWARLDHKFDLMYAKRA 988
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 380 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 424
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 91.1 bits (216), Expect = 8e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 161 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 220
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 221 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 263
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMAS 396
C +G + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 241 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 300
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKA 480
+ NTTAI + R+ +F M+ ++A
Sbjct: 301 CMLSNTTAIAEAWARLDHKFDLMYAKRA 328
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 91.1 bits (216), Expect = 8e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 34 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 93
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 94 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 136
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMAS 396
C +G + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 114 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 173
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKA 480
+ NTTAI + R+ +F M+ ++A
Sbjct: 174 CMLSNTTAIAEAWARLDHKFDLMYAKRA 201
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 90.6 bits (215), Expect = 1e-18
Identities = 39/87 (44%), Positives = 54/87 (62%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT+ LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 1147 SSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKAYHEQLTVAQITNMC 1206
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
FD N MV CDPRHG+Y+ ++RG+
Sbjct: 1207 FDPNNQMVKCDPRHGKYMACCMLYRGD 1233
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 88.6 bits (210), Expect = 4e-18
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +1
Query: 301 QNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSEQFVAMFRRKA 480
Q+ +S+ FVEWIPNN K AVCD+PP GLK A+TF+ N+TAIQ F+R +EQF AMFRR+A
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRA 212
Score = 35.1 bits (77), Expect = 0.057
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 538 SNMNDLISEYQQYQDA 585
SN+NDLISEYQQY+DA
Sbjct: 261 SNLNDLISEYQQYEDA 276
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/95 (37%), Positives = 56/95 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN DL + N+VP+PR+HF +AP+ + ++V E+T
Sbjct: 367 SSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKAYHENMSVAEITSAC 426
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTS 286
F+ N MV CDPR+G+Y+ ++RG+ + K + S
Sbjct: 427 FEPSNQMVKCDPRYGKYMACCLLYRGDVVPKDVNS 461
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNT 414
+G + K+V+ +A I+ K + FV+W P K +I + K TF T
Sbjct: 451 RGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFKCHP-NISDKQKKSTKTFYSGT 503
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +2
Query: 8 ITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFD 187
+T+ RF G LN DL ++ +N+VPFP+LH+ PL + + + ++ F
Sbjct: 285 MTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYALTDVKLPPRRLDQMFTDAFS 344
Query: 188 AKNMMVACDPRHGRYLTVATIFRG 259
+ ++ DP+H YL A I RG
Sbjct: 345 KDHQLIKADPKHNLYLACALILRG 368
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 274 EVDEQLANIQN-KNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSE 450
EV + NI+ K S F+ W K +C +PP G + + N + I+ F + +
Sbjct: 371 EVSDIRRNIERLKPSLKFIHWNQEGWKTGLCSVPPVGQPYSLLTLANNSCIKNTFVELKD 430
Query: 451 QFVAMFRRKA 480
+F+ +++RKA
Sbjct: 431 RFMKLYKRKA 440
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELT 172
S +T LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 226 SSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 282
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP--------RGLKMASTFIG 408
+G + +K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 304 EGDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 363
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKA 480
NTTAI + R+ +F M+ ++A
Sbjct: 364 NTTAIAEAWARLDHKFDLMYAKRA 387
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 11 TTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTS 127
TT LR+PG +N DL L +++P PRLHF G+ PLT+
Sbjct: 276 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTT 314
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFP 85
S IT LRF G LN DL + N+VP+P
Sbjct: 111 SSITASLRFDGALNVDLTEFQTNLVPYP 138
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 2 SGITTCLRFPGQ 37
SG+TTCLRFPGQ
Sbjct: 447 SGVTTCLRFPGQ 458
>SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2)
Length = 341
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 101 TPGFAPLTSRGAQQYRALTVPELTLQMFDAKNM--MVACDPRHGRYLTVA 244
+PG+ L++ G+ Q T P +T +M+ K +A P R+ T+A
Sbjct: 117 SPGYLSLSAFGSPQVSRSTTPGITYEMYGVKERGNSLAARPATSRHATLA 166
>SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7)
Length = 783
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 432 YGLYGRRVTNEGRSHFKTPRRYVTHGNLA 346
Y L GR +GRSH +TP+ YV NL+
Sbjct: 74 YLLSGRGKHGKGRSHRQTPQEYVDTHNLS 102
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 196 HDGRV*SSTREVFDRCDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIA-VCD 366
HDGR+ +S E D DI +M E E++ +Q T+ V W PN +A CD
Sbjct: 285 HDGRMLASGSE--DLIIDI----AMVETGERICEVQCHAPTFTVAWHPNKPLLAFACD 336
>SB_41279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 599
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 504 PHQCTSARSFPPKHSHELLRHPL 436
P + T FPPKH +LR P+
Sbjct: 375 PAKSTGVSCFPPKHDRSILRPPM 397
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -1
Query: 549 IHVGTLPSVNSISSYPHQCTSAR--SFPPKHSHELLRHPLEYGLYGRRVTNEGRSHFKTP 376
I T P+VN +S+ P C S+ S PP S ++ P + H TP
Sbjct: 1923 ISFSTAPTVNHVSNRPSDCPSSELLSSPPNISTLVITAPSVITSVALPEEKQSLVHDLTP 1982
Query: 375 RRYVTHGNLAV 343
+ T NLAV
Sbjct: 1983 SEHQT--NLAV 1991
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,443,934
Number of Sequences: 59808
Number of extensions: 469002
Number of successful extensions: 1341
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -