Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0064
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 170 6e-43
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 170 6e-43
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 163 7e-41
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 138 3e-33
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 103 6e-23
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 5e-17
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 84 5e-17
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 7e-17
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 84 7e-17
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 83 9e-17
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 83 2e-16
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 83 2e-16
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 2e-16
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 82 2e-16
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 82 2e-16
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 82 2e-16
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 73 1e-13
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 58 5e-09
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 57 7e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 55 3e-08
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 36 0.014
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 34 0.057
SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2) 29 2.1
SB_40918| Best HMM Match : DMAP_binding (HMM E-Value=0.48) 27 6.5
SB_36562| Best HMM Match : Keratin_B2 (HMM E-Value=8.7) 27 6.5
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 170 bits (413), Expect = 6e-43
Identities = 77/88 (87%), Positives = 81/88 (92%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGF PLTSRG+QQYRALTVPELT
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGG 264
QMFDAKNMM ACDPRHGRYLTVA + G
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAMFRG 319
Score = 102 bits (245), Expect = 1e-22
Identities = 47/76 (61%), Positives = 56/76 (73%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRGRMSMKEV EQ+ N+Q NS+YFV IPNN K AVC IPPRGL ++TFIGN+ IQ
Sbjct: 317 FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQE 376
Query: 435 IFXKVSEQFVXXSRXK 482
+F ++SEQF R K
Sbjct: 377 LFKRISEQFTAMFRRK 392
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 170 bits (413), Expect = 6e-43
Identities = 77/88 (87%), Positives = 81/88 (92%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGF PLTSRG+QQYRALTVPELT
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGG 264
QMFDAKNMM ACDPRHGRYLTVA + G
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAMFRG 319
Score = 102 bits (245), Expect = 1e-22
Identities = 47/76 (61%), Positives = 56/76 (73%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRGRMSMKEV EQ+ N+Q NS+YFV IPNN K AVC IPPRGL ++TFIGN+ IQ
Sbjct: 317 FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQE 376
Query: 435 IFXKVSEQFVXXSRXK 482
+F ++SEQF R K
Sbjct: 377 LFKRISEQFTAMFRRK 392
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 163 bits (396), Expect = 7e-41
Identities = 75/88 (85%), Positives = 79/88 (89%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRL F+ PGF PLTSRG+QQYRALTVPELT
Sbjct: 177 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPELTQ 236
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGG 264
QMFDAKNMM ACDP HGRYLTVA + G
Sbjct: 237 QMFDAKNMMAACDPLHGRYLTVAAMFRG 264
Score = 101 bits (242), Expect = 3e-22
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRGRMSMKE+ EQ+ N+Q NS+YFV IPNN K AVC IPPRGL ++TFIGN+ IQ
Sbjct: 262 FRGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQE 321
Query: 435 IFXKVSEQFVXXSRXK 482
+F ++SEQF R K
Sbjct: 322 LFKRISEQFTAMFRRK 337
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 138 bits (333), Expect = 3e-33
Identities = 60/88 (68%), Positives = 73/88 (82%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+TTCLRFPGQLNADLRKLAVNM+P+PRLHF+ PGF PLTSR YRALTV +LT
Sbjct: 137 TMSGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECVSYRALTVADLTQ 196
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGG 264
+FD KN+++AC+P+ G+YLT A + G
Sbjct: 197 AIFDNKNLLIACNPKRGKYLTYAAMYRG 224
Score = 62.9 bits (146), Expect = 1e-10
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
+RG MSMKEV +Q+A Q S+ FV IPNN K+AVC +PP + +++ I + IQ
Sbjct: 222 YRGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPHDMKMSASCISSNTAIQE 281
Query: 435 IFXKV 449
+F ++
Sbjct: 282 LFKRI 286
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 103 bits (248), Expect = 6e-23
Identities = 46/64 (71%), Positives = 52/64 (81%)
Frame = +1
Query: 76 MVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQMFDAKNMMVACDPRHGRYLTVATI 255
MVPFPRLHF+ PGF PL SR QQY+ ++V ELT QMFDA+NMM ACDPRHGRYLTVA I
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAAI 60
Query: 256 SGGE 267
G+
Sbjct: 61 FRGK 64
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/67 (50%), Positives = 41/67 (61%)
Frame = +3
Query: 282 VXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQTIFXKVSEQF 461
V EQ+ N Q NS +FV IPNN K VC I P+GL A+TF+GN IQ +F +V EQF
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 212
Query: 462 VXXSRXK 482
R K
Sbjct: 213 TAMFRRK 219
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/96 (39%), Positives = 54/96 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + LTV ++T
Sbjct: 606 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADITNS 665
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKXTS 291
F+ N MV CDPRHG+Y+ + G+ + K S
Sbjct: 666 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNS 701
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + LTV E+T
Sbjct: 1039 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNA 1098
Query: 184 MFDAKNMM 207
F+ N M
Sbjct: 1099 CFEPANQM 1106
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + LTV E+T
Sbjct: 220 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITTS 279
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 280 CFEPANQMVKCDPRHGKYMACCLLFRGDVVPK 311
Score = 70.1 bits (164), Expect = 9e-13
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +1
Query: 43 LNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQMFDAKNMMVACDP 222
LN DL + N+VP+PR+HF + P+ S + +TV +LT F+ N MV CDP
Sbjct: 664 LNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDP 723
Query: 223 RHGRYLTVATISGGECL*K 279
RHG+Y+ + G+ + K
Sbjct: 724 RHGKYMACCLLFRGDVVPK 742
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 84.2 bits (199), Expect = 5e-17
Identities = 37/88 (42%), Positives = 52/88 (59%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT+ LRF G LN DL + N+VP+PR+HF + P+ S + LTV ++T
Sbjct: 1146 VSSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKAYHEQLTVAQITNM 1205
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGE 267
FD N MV CDPRHG+Y+ + G+
Sbjct: 1206 CFDPNNQMVKCDPRHGKYMACCMLYRGD 1233
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 84.2 bits (199), Expect = 5e-17
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + LTV E+T
Sbjct: 160 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNS 219
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 220 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPK 251
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 83.8 bits (198), Expect = 7e-17
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + LTV E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNA 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 295 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPK 326
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 83.8 bits (198), Expect = 7e-17
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + LTV E+T
Sbjct: 668 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNA 727
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 728 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPK 759
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 295 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 326
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 83.4 bits (197), Expect = 9e-17
Identities = 38/97 (39%), Positives = 55/97 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKXTSN 294
F+ N MV CDPRHG+Y+ + G+ + K S+
Sbjct: 295 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSS 331
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + +TV +LT
Sbjct: 200 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNA 259
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 260 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPK 291
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + LTV ++T
Sbjct: 33 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNA 92
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 93 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPK 124
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + LTV ++T
Sbjct: 234 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNA 293
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 294 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPK 325
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 172 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 231
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 232 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 263
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 299 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 358
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 359 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 390
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 820 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 879
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 880 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPK 911
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 160 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 219
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 220 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 251
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 33 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 92
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ N MV CDPRHG+Y+ + G+ + K
Sbjct: 93 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 124
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 78.6 bits (185), Expect = 3e-15
Identities = 34/96 (35%), Positives = 53/96 (55%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S +T LRF G LN DL + N+VP+PR+HF + P+ + ++V E+T
Sbjct: 366 VSSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKAYHENMSVAEITSA 425
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKXTS 291
F+ N MV CDPR+G+Y+ + G+ + K S
Sbjct: 426 CFEPSNQMVKCDPRYGKYMACCLLYRGDVVPKDVNS 461
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/67 (50%), Positives = 41/67 (61%)
Frame = +3
Query: 282 VXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQTIFXKVSEQF 461
V EQ+ N Q NS +FV IPNN K VC I P+GL A+TF+GN IQ +F +V EQF
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 150
Query: 462 VXXSRXK 482
R K
Sbjct: 151 TAMFRRK 157
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +1
Query: 13 ITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQMFD 192
+T+ RF G LN DL ++ +N+VPFP+LH+ PL + + + ++ F
Sbjct: 285 MTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYALTDVKLPPRRLDQMFTDAFS 344
Query: 193 AKNMMVACDPRHGRYLTVATISGG 264
+ ++ DP+H YL A I G
Sbjct: 345 KDHQLIKADPKHNLYLACALILRG 368
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 57.2 bits (132), Expect = 7e-09
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 306 QXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQTIFXKVSEQFVXXSRXK 482
Q +S+ FV IPNN K AVC +PP GL A+TF+ N+ IQ F + +EQF R +
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRR 211
Score = 30.3 bits (65), Expect = 0.92
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 1 TMSGITTCLRFPGQ 42
TMSG+TT LRFPGQ
Sbjct: 140 TMSGVTTSLRFPGQ 153
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELT 177
+S +T LRF G LN DL + N+VP+PR+HF + P+ S + LTV E+T
Sbjct: 225 VSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 282
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTS 132
M+ TT LR+PG +N DL L +++P PRLHF G+ PLT+
Sbjct: 272 MATSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTT 314
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 36.3 bits (80), Expect = 0.014
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFP 90
+S IT LRF G LN DL + N+VP+P
Sbjct: 110 VSSITASLRFDGALNVDLTEFQTNLVPYP 138
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 34.3 bits (75), Expect = 0.057
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 1 TMSGITTCLRFPGQ 42
TMSG+TTCLRFPGQ
Sbjct: 445 TMSGVTTCLRFPGQ 458
>SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2)
Length = 341
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 106 TPGFXPLTSRGAQQYRALTVPELTLQMFDAKNM--MVACDPRHGRYLTVA 249
+PG+ L++ G+ Q T P +T +M+ K +A P R+ T+A
Sbjct: 117 SPGYLSLSAFGSPQVSRSTTPGITYEMYGVKERGNSLAARPATSRHATLA 166
>SB_40918| Best HMM Match : DMAP_binding (HMM E-Value=0.48)
Length = 366
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 199 NMMVACDPRHGRYLTVATISG 261
++ ++CDPRHG A++SG
Sbjct: 156 SVKISCDPRHGETYRQASVSG 176
>SB_36562| Best HMM Match : Keratin_B2 (HMM E-Value=8.7)
Length = 186
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -1
Query: 217 HTRPSC-FWRRTFAASARVQLKLDTVELLATSAAXSQGCRNAGAETAPCSQPTSSDQRSA 41
H RP C F T + + + L L+ + L+AT+ A G R + ++ APC SS +R++
Sbjct: 5 HYRPLCQFVASTESTADKGFLGLNIL-LVATTRAV--GKRTSSSQ-APCRNQVSSLERAS 60
Query: 40 VQETANTS*CRT 5
++ T C T
Sbjct: 61 TRQLYETECCLT 72
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,529,339
Number of Sequences: 59808
Number of extensions: 227158
Number of successful extensions: 577
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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