Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0233.Seq
(793 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 35 0.066
SB_58379| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31) 33 0.27
SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3) 31 0.81
SB_39187| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 31 1.1
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 31 1.4
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 31 1.4
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 30 2.5
SB_52819| Best HMM Match : E-MAP-115 (HMM E-Value=0.82) 29 3.3
SB_28308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_5939| Best HMM Match : BAH (HMM E-Value=7.9e-18) 29 3.3
SB_3098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 29 3.3
SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15) 29 3.3
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 29 5.7
SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 29 5.7
SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2) 29 5.7
SB_41730| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 28 7.5
SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3) 28 7.5
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 28 7.5
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 28 7.5
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 28 7.5
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 28 7.5
SB_26361| Best HMM Match : fn3 (HMM E-Value=0) 28 10.0
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 28 10.0
SB_2978| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
SB_45746| Best HMM Match : FA_desaturase (HMM E-Value=0) 28 10.0
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 28 10.0
SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 35.1 bits (77), Expect = 0.066
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -1
Query: 727 PCNNGRRTRRQEGXAPWGSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 548
P + ++ RQ G P + P + PV+K P K E E+ ++ PED P E
Sbjct: 55 PKTSQKQAGRQAGNKP-EDRTEYKPEDKPVEKKPEGKPENQPEKKPEDKPEDKPEDKP-E 112
Query: 547 NGDAEESNDASEN 509
+ ++ D E+
Sbjct: 113 DKQEDKPEDKQED 125
>SB_58379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = -1
Query: 736 FNLPCNNGRRTRRQEGXAPWGSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDS 557
F PC+ + + + AP S P + +S ++ SPA++ +S G+E ++
Sbjct: 18 FVFPCSRRKYSSASQS-APEPSEPDIE--QSEIQNSPAER--KTQSKGEEKNKEKGVSFG 72
Query: 556 PAENGDAEESNDASENVMPQKRK 488
P N + + N+ ++ MP+ K
Sbjct: 73 PPGNDEDDTYNEDEDDEMPEPPK 95
>SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31)
Length = 801
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 646 SPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 521
SPV+ A+ VE S K+N E E+ P GDA E D
Sbjct: 155 SPVEHEVAENVEDDSSQTKKNNETELQEEEPPSVGDAMECKD 196
>SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 619 KVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE 512
K E +E+NG ENG +EA E+ PA D + A+E
Sbjct: 313 KNEDSEANGDENGHNEASEEKPALKRDGTMAVTAAE 348
>SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3)
Length = 213
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -1
Query: 676 GSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENVMPQ 497
GS L+ + K + E G+E +EA E++PAE D +E
Sbjct: 148 GSETSLNAADDEETKEKTEIAVEEEKEGEEFKREEAAEETPAEVADGKEKKQRRRRFSFS 207
Query: 496 KRKR 485
K+K+
Sbjct: 208 KKKK 211
>SB_39187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 604 ESNGKENGTDEAPEDSPAENGDAEESNDASEN 509
+ +GK + D+ +D ENGD +E++D +EN
Sbjct: 48 DDDGKNDDDDKNDDDDDDENGDDDENDDDNEN 79
>SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 31.5 bits (68), Expect = 0.81
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 13/106 (12%)
Frame = -1
Query: 763 YSLFKFIHFFNLPCNNGRRTRRQEGXAPWGS-----NPQLSPXE--SPVKKSPA--KKVE 611
Y L F + P RRTR + P+GS P+L P + +K+SP +
Sbjct: 1102 YKLHNPSDFEDSPVRETRRTRIRSDDPPYGSPPAKRKPELEPSDRVEVMKESPLDFENSP 1161
Query: 610 AAESNGKENGTDEAPEDSPAENGDAEESNDASENVM----PQKRKR 485
A E+ +D+ P ++ E + S+ VM PQ R R
Sbjct: 1162 ARETRRTRLRSDDLPSENLGTRRKTESESSESDGVMKENKPQSRPR 1207
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 634 KSPAKKVEAAESNGKENGTDEAPEDSPAENG-DAEESNDASENVMPQKRKR 485
K K+ + E+ ++GTDE EDS E+ D + SN AS+ + + +
Sbjct: 1532 KEKKKRKKEDEATRSDDGTDEKTEDSMQEDAKDLDSSNTASDTTKEKGKNK 1582
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -1
Query: 649 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENVMPQKRKR 485
E+ ++ KK E E + K+N +E ED E EE+ + + K+K+
Sbjct: 1895 ENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEKKKKEENEEEDDKKKKTKKKK 1949
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/55 (21%), Positives = 29/55 (52%)
Frame = -1
Query: 673 SNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 509
S P E+P K+P K + + ++ DE+ E +++ D+ +++D+ ++
Sbjct: 798 SKPSEKAMEAPSGKAPDTKQKERKKTDSDSDDDESSESDSSDDEDSSDTSDSDDS 852
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -1
Query: 640 VKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENVMPQKRK 488
VKK KK E AE +E E P+D + D + D +E K K
Sbjct: 494 VKKDETKKSEKAEIKKEEIKVKEEPKDDAEKKEDEGKEPDKTEQTTSAKSK 544
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = -1
Query: 613 EAAESNGKE--NGTDEAPEDSPAENGDAEESNDASEN 509
E+ ESNG + NG+DE+ E E+ +++ESN++ E+
Sbjct: 166 ESDESNGSDESNGSDESNESD--ESNESDESNESDES 200
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -1
Query: 673 SNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 509
SN ES + E+ ESNG + + + E+ ++ESN++ E+
Sbjct: 182 SNESDESNESDESNESDESNESDESNGSDESNESDESNESDESNGSDESNESDES 236
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -1
Query: 673 SNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 509
SN ES + + E ESNG + + + E+ ++ESN++ E+
Sbjct: 134 SNESDKSNESDKRNESDESDEDDESNGSDESNESDESNGSDESNGSDESNESDES 188
>SB_52819| Best HMM Match : E-MAP-115 (HMM E-Value=0.82)
Length = 883
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = -1
Query: 649 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN-------VMPQKR 491
E+P++ P ++ E + +P DS E AE +D+ +N V+ Q+R
Sbjct: 481 ETPMEDVPVERETPGTVTSSEEQSTRSPSDSRFEEEGAEAKSDSKDNEQVPADPVLEQER 540
Query: 490 KRLV 479
+R+V
Sbjct: 541 QRMV 544
>SB_28308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -1
Query: 679 WGSNPQLSPXESPVKKSPAKKV---EAAESNGKENGTDEAPED--SPAENGDAEESNDAS 515
WG P + + P ++ ++ E+ K+ + +D P ++G +S+DAS
Sbjct: 11 WGPTTTRPPPKQTTTRFPMRRTRDKKSTETGTKDPAYELGTKDPIQPLKSGTTTKSSDAS 70
Query: 514 ENVMPQKR 491
E+ P+K+
Sbjct: 71 ESFKPKKK 78
>SB_5939| Best HMM Match : BAH (HMM E-Value=7.9e-18)
Length = 1086
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -1
Query: 718 NGRRTRRQEGXAPWGSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGD 539
NGRR + G P S S S K+ KK + ++ + + AP SPA N
Sbjct: 575 NGRRLPKI-GKPPSPSEGSTSSSGSTANKAKDKKGKGKKNKILKRSHEPAPI-SPANNSK 632
Query: 538 AEESNDASENV 506
+SND+ +++
Sbjct: 633 RRKSNDSDDDI 643
>SB_3098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 604 ESNGKENGTDEAPEDSPAENGDAEESNDASE 512
ESNG ENG E+ P + +SN+ +E
Sbjct: 25 ESNGAENGVPSDTEEKPLSSTSEHDSNEENE 55
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 637 KKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 509
KK KKV+ + + K+N + + E +++GD E+ + E+
Sbjct: 175 KKDDDKKVDEKKEDDKKNDSSASGESEDSDDGDDEDDEEDEED 217
>SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15)
Length = 582
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -1
Query: 682 PWGSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENVM 503
P S +P +SP+ ++P +V A N +++ + P DSP+ + ++ +
Sbjct: 197 PRDSPSSRNPRDSPLSRNP--RVSPAFRNPRDSPSSRNPRDSPSSRDPRDSTSSRNPRDS 254
Query: 502 PQKR 491
P R
Sbjct: 255 PASR 258
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -1
Query: 730 LPCNNG---RRTRRQEGXAPWGSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPED 560
LP ++G RRTR G G +SP K + + G +NG +E+ D
Sbjct: 251 LPSSHGKTKRRTRGSLGGRKKGKRTSISPA--------LKAISEENTPGSKNGKEESEID 302
Query: 559 SPAENGDAEESNDASE 512
P D+++S+ S+
Sbjct: 303 EPYVASDSDDSSGLSK 318
>SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 520
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -1
Query: 730 LPCNNG---RRTRRQEGXAPWGSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPED 560
LP ++G RRTR G G +SP K + + G +NG +E+ D
Sbjct: 161 LPSSHGKTKRRTRGSLGGRKKGKRTSISPA--------LKAISEENTPGSKNGKEESEID 212
Query: 559 SPAENGDAEESNDASE 512
P D+++S+ S+
Sbjct: 213 EPYVASDSDDSSGLSK 228
>SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2)
Length = 404
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -1
Query: 655 PXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENVMPQKRK 488
P S KK K A S K+ E+P+ SPA G S P+++K
Sbjct: 270 PLTSKEKKHEKTKT-AKPSKAKKPKKSESPQRSPANTGIESASGSGETGTKPKRKK 324
>SB_41730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 49
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 604 ESNGKENGTDEAPEDSPAENGDAEESNDASENVMPQKRK 488
++N N TD+AP GDAE S + Q+ K
Sbjct: 9 DNNNNNNETDDAPVGEENHAGDAETSEEPERKKKKQRTK 47
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 625 AKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENVMPQKR 491
A KV AES+ + DS ++GDAEE + E+ +R
Sbjct: 255 ASKVSNAESSSSGSPLISESNDSRQKSGDAEEKENEKESASINRR 299
>SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3)
Length = 376
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = -1
Query: 673 SNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENVMPQK 494
S PQL PVK P K V+ E + E PE+ + + SE+V+
Sbjct: 311 SKPQLPDWLEPVKDEPHKPVDFTEGDVSE------PEEKEKKTSPKQTGVPVSEDVVASS 364
Query: 493 RKR 485
R R
Sbjct: 365 RDR 367
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -1
Query: 670 NPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 515
+PQ P K K S GKEN +A ED EE N S
Sbjct: 744 SPQKQPKRQDHKPKTPKASPEKRSCGKENTAKKAKEDRGTPEKQVEELNGCS 795
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Frame = -1
Query: 646 SPVKKSPAKKVEAAESNGKENGTDE---APEDSPAENG-------DAEESNDASENVMPQ 497
S KK+PAK+ +++ + ++ +DE P S +NG ++ S+ +SE+ P
Sbjct: 294 SKEKKTPAKQESSSDDSSSDDSSDEDTKMPTKSKLKNGTKTKAKEESSSSDSSSEDEPPA 353
Query: 496 KRKR 485
KR +
Sbjct: 354 KRPK 357
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -1
Query: 328 HQCPLEFNSHP---HIPLLQMYYTHTDSSYYEGLSSFVS 221
HQ PL F+ P H P++ + T+ SY+E +S VS
Sbjct: 918 HQPPLVFHQPPPMVHQPIMHSHETYLAHSYFEPHTSHVS 956
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Frame = -1
Query: 640 VKKSPAKK-VEAAESNGKENGTDEAPEDSPAENG-----DAEESNDASEN 509
+ K P+KK +AAE+ ++ EAPE+ PAE+ + E+ DAS++
Sbjct: 49 ISKMPSKKGAKAAEAQPEKKA--EAPEEKPAEDSKDQAVEESETKDASKD 96
>SB_26361| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1898
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -1
Query: 643 PVKKSPAKKVEAAESNGKENGTDE--APEDSPAENGDAEESNDA 518
P KK + V++ + + + G + A +D+ A+NG A + NDA
Sbjct: 410 PEKKLYVQTVDSPDDDDEAEGNHDGGAGDDNDADNGGAGDDNDA 453
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = -1
Query: 727 PCNNGRRTRR-QEGXAPWGSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA 551
P + +++ + ++G S P+ S PA K + +E GK+ A E +
Sbjct: 520 PASKSKQSEKDKQGDGQPASEPKQSEKGKLGDGQPASKSKQSEK-GKQGDGQPASEPKQS 578
Query: 550 ENGDAEESNDASENVMPQKRKR 485
E G + ASE +K K+
Sbjct: 579 EKGKQGDGQPASEPKQSEKGKQ 600
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = -1
Query: 694 EGXAPWGSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 518
EG P P+ S E K P++++E E + + PE+ P E ++A
Sbjct: 1631 EGVKPVTHIPEESETEIKPVKQPSEQIEPEEEPVTQTSEESEPEEEPMTQIPEESMSEA 1689
>SB_2978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/61 (21%), Positives = 26/61 (42%)
Frame = -1
Query: 676 GSNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENVMPQ 497
G N + + + P KK E ++ DE P + PA++ +E ++ ++
Sbjct: 37 GKNDEKPTEQKSGNEKPVKKSSDEEKPTEQKSDDERPVEEPAKDEKPQEKASDNKKLLVH 96
Query: 496 K 494
K
Sbjct: 97 K 97
>SB_45746| Best HMM Match : FA_desaturase (HMM E-Value=0)
Length = 331
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 673 SNPQLSPXESPVKKSPAKKVEAAESNGK 590
+NP++ P +KS +VEA E NGK
Sbjct: 302 TNPKIGPFARIKRKSKKTEVEAEEKNGK 329
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -1
Query: 673 SNPQLSPXESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENVMPQK 494
+ P + E P KS K + A++ KE G + E SN+ASE V P +
Sbjct: 2222 NEPPVEEKEKPELKSEVKNIPASDKQPKEEGGLFR-----FVSKFTEHSNEASEAVKPSE 2276
Query: 493 RKR 485
++R
Sbjct: 2277 QQR 2279
>SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 27.9 bits (59), Expect = 10.0
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Frame = -1
Query: 673 SNPQLSPXESPVKKSPAKKVEAAESNG--KENGTDEAPEDSPAENG--DAEESNDA-SEN 509
SN E K+ KK E + G K+ G D +SPAE+G AEE SE
Sbjct: 533 SNADQKEGEEGEKEEGEKKEEEVKEEGAEKKEGDDAENAESPAEDGAKPAEEGEGGKSEE 592
Query: 508 VMP 500
P
Sbjct: 593 AKP 595
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,639,271
Number of Sequences: 59808
Number of extensions: 397527
Number of successful extensions: 1452
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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