Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0137
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 197 8e-51
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 62 5e-10
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 59 4e-09
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 56 2e-08
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 55 5e-08
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 53 2e-07
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 53 3e-07
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 52 3e-07
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 52 3e-07
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 52 4e-07
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 51 1e-06
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 50 1e-06
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 50 2e-06
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 49 3e-06
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 48 5e-06
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 48 7e-06
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 48 7e-06
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 46 4e-05
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 42 4e-04
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 42 4e-04
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 42 5e-04
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 40 0.001
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 40 0.001
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 40 0.002
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 39 0.003
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 38 0.006
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 38 0.006
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 38 0.008
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 37 0.013
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 37 0.018
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 36 0.024
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 36 0.031
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.072
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 34 0.13
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 34 0.13
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 34 0.13
SB_16833| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 32 0.38
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 32 0.51
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 31 0.89
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 31 0.89
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 1.2
SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8) 31 1.2
SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08) 30 1.5
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 30 1.5
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 30 2.0
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.6
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 29 4.7
SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 28 8.3
SB_43431| Best HMM Match : DEAD (HMM E-Value=6.4) 28 8.3
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 28 8.3
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 28 8.3
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 197 bits (480), Expect = 8e-51
Identities = 97/146 (66%), Positives = 101/146 (69%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEGIPIVLCGNKV 433
DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNW RDL RVCE IPIVLCGNKV
Sbjct: 87 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLERVCENIPIVLCGNKV 146
Query: 434 DIKDRKVKAKTIVFHRKKNLQYYDILLSQTTTSKNPSCG*LEN*LVTVTXXXXXXXXXXX 613
DIKDRKVKAK I FHRKKNLQYYD+ + P +
Sbjct: 147 DIKDRKVKAKAITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALQP 206
Query: 614 XEVTMDPQWQNQIEKDLPDAQNTALP 691
EV MDP Q E+DL DAQNTALP
Sbjct: 207 PEVQMDPNMAKQYEQDLNDAQNTALP 232
Score = 104 bits (249), Expect = 8e-23
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +3
Query: 108 VGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
VGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL+F T+RGPI+FNVW
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVW 86
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +2
Query: 248 CVDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVC-EGIPIVLCG 424
C DTAGQEKF G+ YY I++FD+T+R T+ ++P W ++ + + I VL G
Sbjct: 64 CWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVG 123
Query: 425 NKVDIKDRKVKAKTIVFHRKKNLQYYDILLSQTTTSK 535
NK D+K K T NL ++ LL T++K
Sbjct: 124 NKTDLKGASRKVNT---RSAANLAEFEELLYLETSAK 157
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 90 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
+FK ++VGD G GKT+ ++R G F +T+GV+V V + ++ W
Sbjct: 11 SFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCW 65
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLV-----RVCEGIPIVL 418
DTAGQE+F L +Y C +++FDVT ++K + +W + + R E P V+
Sbjct: 3 DTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPFVV 62
Query: 419 CGNKVDIKDRKVKAKTIV--FHRKKNLQYYD 505
GNK+D+++R V AK H K ++ Y++
Sbjct: 63 LGNKIDLENRAVSAKRAQAWCHSKNDIPYFE 93
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVC-EGIPIVLCGNK 430
DTAGQE+F + Y+ + ++++DVT ++ +V +W + C + +PI+LCGNK
Sbjct: 497 DTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNK 556
Query: 431 VDIK-DRKVKAKTIV 472
+DI+ + KT++
Sbjct: 557 IDIRQSAAAENKTVI 571
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 200
FK VL GD GK++F+ R F +TLGV+
Sbjct: 443 FKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVD 478
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVR-VCEGIPIVLCGNK 430
DTAGQE+F + YY I+++DVT + ++ NV W +++ R CE + +L GNK
Sbjct: 84 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNK 143
Query: 431 VDIKDRKV 454
D+ +KV
Sbjct: 144 CDLTTKKV 151
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEGIPIVLCGNKV 433
DTAGQE+F + YY I+++DVTS T+ NV W ++ + C+ + +L GNK
Sbjct: 32 DTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEIDQNCDDVIRILVGNKD 91
Query: 434 DIKDRKV 454
D +KV
Sbjct: 92 DCPSKKV 98
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVR-VCEGIPIVLCGNK 430
DTAGQE++ L YY Q AI+++D+T++ T+ W ++L R I I L GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNK 135
Query: 431 VDIKDRKV 454
D+ +++
Sbjct: 136 ADLASKRM 143
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
FK VL+G+ GK++ V R + G+F + +T+G + ++F +W
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/66 (33%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +2
Query: 251 VDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCE--GIPIVLCG 424
+DTAGQE+F +R+ Y G+ +++F VT R +++ + + ++RV + P+++CG
Sbjct: 64 LDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICG 123
Query: 425 NKVDIK 442
NK D++
Sbjct: 124 NKSDLE 129
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCE-GIPIVLCGNK 430
DTAGQE+F + YY A++++D++SR T+ ++ NW D + I I+L GNK
Sbjct: 150 DTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNK 209
Query: 431 VDI-KDRKV 454
D+ DR+V
Sbjct: 210 KDLDADREV 218
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVR-VCEGIPIVLCGNK 430
DTAGQE+F L YY ++++DV T+ ++ W ++ CEG+ +L GNK
Sbjct: 63 DTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNK 122
Query: 431 VDIKD-RKVKAKTI-VFHRKKNLQYYDILLSQTT 526
D+ D R+V T F K ++ + + +T
Sbjct: 123 CDLIDCRQVGYNTAKEFAEKLDISFIETSAKDST 156
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWTQPDKR 272
FK +L+GD G GK++ + R F Y++T+GV+ + I+ +W +
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Query: 273 SLVVLET 293
L T
Sbjct: 69 RFRTLTT 75
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVR-VCEGIPIVLCGNK 430
DTAGQE+F + YY I+ +D+T++ +++++P W D R + + I + GNK
Sbjct: 62 DTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNK 121
Query: 431 VDIK-DRKV---KAKTIVFHRKKNLQYYDILLSQTT 526
D+ +RKV AK ++ +KK L ++ L + T
Sbjct: 122 SDLSTNRKVDFHHAKLLL--KKKTLLHWRRQLKRLT 155
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 72 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNV 251
M D FK +LVGD GKT V++ G F T+GV+ + ++ +
Sbjct: 1 MDDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQI 60
Query: 252 W 254
W
Sbjct: 61 W 61
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +2
Query: 251 VDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRV--CEGIPIVLCG 424
+DTAG E+F +RD Y GQ ++++ + +R T+ ++ ++RV E +PIVL G
Sbjct: 56 LDTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVG 115
Query: 425 NKVDIKDRK 451
NK DI D +
Sbjct: 116 NKSDIYDER 124
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 84 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
M +K V++G GG GK+ + +TG+F +KY T+
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI 36
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +2
Query: 260 AGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL-VRVCEGIPIVLCGNKVD 436
AGQE+F + YY +I++D+T R +Y N+ W ++ EG+ ++L GNK+D
Sbjct: 376 AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKID 435
Query: 437 I-KDRKVK 457
+ DR+V+
Sbjct: 436 LDTDREVQ 443
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 RANSF*CVDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRV-CEGI 406
+A F DTAGQE+F L YY AI+++D+T T+ ++ W R+L R + I
Sbjct: 7 KAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDI 66
Query: 407 PIVLCGNKVDIKDRK 451
I + GNK D D++
Sbjct: 67 VIAVAGNKCDKADQR 81
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 221 YEPRANSF*CVDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRV-- 394
Y+P F TAG E+F +RD Y GQ ++++ + +R T+ ++ ++RV
Sbjct: 32 YDPTIEDF--YHTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKG 89
Query: 395 CEGIPIVLCGNKVDIKDRK 451
E +PIVL GNK DI D +
Sbjct: 90 SENVPIVLVGNKSDIYDER 108
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 84 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
M +K V++G GG GK+ + +TG+F +KY T+
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI 36
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 251 VDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRV--CEGIPIVLCG 424
+DTAGQE++ +RD Y G+ + +F V + +++++ + + RV E +P+VL G
Sbjct: 282 LDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPMVLVG 341
Query: 425 NKVDIKDRKV 454
NK D+ R V
Sbjct: 342 NKCDLPQRTV 351
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL-VRVCEGIPIVLCGNK 430
DTAGQE+F + YY ++++DVT+ ++ N+ W + + E + +L GNK
Sbjct: 11 DTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNK 70
Query: 431 VDIKDRKVKAKT 466
D+ D++V ++T
Sbjct: 71 CDMYDKRVISQT 82
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEG--IPIVLCGN 427
DTAGQE+F L Y + A+I+FD+T+ ++++V +W + +VR G I++ GN
Sbjct: 218 DTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVK-MVRDERGEKAVIIIVGN 276
Query: 428 KVDIKDRK 451
K+D DR+
Sbjct: 277 KMDESDRR 284
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
K V +GD G GK++ R + FE+KY T+G++ + +R +W
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIW 217
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVC-EGIPIVLCGNK 430
DTAGQE+F + YY II +D+T T+KNV W D+ + E +L GNK
Sbjct: 101 DTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNK 160
Query: 431 VDI-KDRKVKAKTIV 472
D+ ++R+V + V
Sbjct: 161 KDLEREREVSLEDAV 175
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEGIPIV--LCGN 427
DTAGQE+F + YY +I++D+T+R ++ NV +W ++ + E +V L G+
Sbjct: 69 DTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGH 128
Query: 428 KVDIKDRKV 454
K+D + ++V
Sbjct: 129 KIDKESKRV 137
Score = 34.7 bits (76), Expect = 0.072
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNV 251
F+ +L+GD GK++ +++ G+F + T+GV+ H V +G +R +
Sbjct: 14 FRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLEL-KGDVRIKL 65
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL-----VRVCEGIPIVL 418
DTAGQE+F LR +Y ++++ V ++ N+ W ++ VR + P +L
Sbjct: 266 DTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFIL 325
Query: 419 CGNKVDIKDRKV 454
GNKVD++ R V
Sbjct: 326 LGNKVDVEGRAV 337
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 105 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 200
L DGG GK++ + R + G+F+ + T+GVE
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVE 247
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVC-EGIPIVLCGNK 430
DTAGQE+F + Y+ + +I +DVT+ ++ N+ W + EG+ ++ GNK
Sbjct: 951 DTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNK 1010
Query: 431 VDIKDRKVKAKTIVFHRKKNLQYYDILLSQTT 526
D+ + + K YD L +T+
Sbjct: 1011 TDLAEDEESRVVKTIDGKNLANQYDALYMETS 1042
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
FK V +GD G GK++F+ R +++ + AT+GV+ + N I +W
Sbjct: 897 FKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLW 950
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEG----IPIVLC 421
DTAGQE++ + Y+ Q ++FD+T +T+ + W DL R G I ++L
Sbjct: 407 DTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWI-DLARTTSGADSNIQLILV 465
Query: 422 GNKVDIKDRK 451
GNK D++D +
Sbjct: 466 GNKKDMEDNR 475
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCE-GIPIVLCGNK 430
DTAGQE++ + YY A++++D+T + T+++V W ++ + I ++L GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNK 126
Query: 431 VDIKDRKVKA 460
D+K + A
Sbjct: 127 CDLKHLRAVA 136
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
+K VL+GD G GK++ + R EF+ + +T+GVE I+ VW
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVW 66
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WXRDLVRVCEGIPIVLCGNK 430
DTAGQE + LR Y ++ F + S + +N+P W ++ C +PI+L GNK
Sbjct: 5983 DTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 6042
Query: 431 VDIK 442
D++
Sbjct: 6043 KDLR 6046
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 550 ATGRVFRSCSLT*QNVVVLQILFPVENNSF-RLNFS-VFNIHFVSAQDNRDTFTYT 389
ATG VF + +NV ++++ +++ F L+ S +H + DN F+ T
Sbjct: 5463 ATGEVFLKSGVDYENVQIIEVTVTAKDDGFPSLSGSTTLRVHVIDLNDNAPVFSAT 5518
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 206 SSSIPYEPRANSF*CVDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WXRD 382
SS+I + +A + DTAGQE + LR Y ++ FD+ SR +++N+ + W +
Sbjct: 43 SSNIMLDGKAYNVGLWDTAGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPE 102
Query: 383 LVRVCEGIPIVLCGNKVDIKDRKVKAKTIVFHRKKNLQYYD 505
L P +L GNK D++ + + ++ HR ++ Y+
Sbjct: 103 LNHHMPETPKILVGNKRDLRSAQ-QNTSLSNHRSRDPITYE 142
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
K V+VGDGG GK+ F+ T F +Y+ T+
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTV 38
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWXRDLVRVCEGIPIVLCGNK 430
DTAGQE + LR Y Q ++ F V S +++NV W ++ C P +L G +
Sbjct: 57 DTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQ 116
Query: 431 VDIKD 445
VD++D
Sbjct: 117 VDLRD 121
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 84 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
M T KCV+VGDG GKT + + T +F +YV T+
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +2
Query: 260 AGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL-----VRVCEGIPIVLCG 424
AGQE+F + YY +++FD+ + T W +DL + + +P +L G
Sbjct: 76 AGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVG 135
Query: 425 NKVDIKDRKVKAKTI 469
NK D+ DR V + I
Sbjct: 136 NKSDLPDRPVDKEII 150
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVW 254
FK ++VGD TGK +FVKR++ + Y T+GV+ + IR +W
Sbjct: 19 FKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIW 73
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WXRDLVRVCEGIPI-VLCGN 427
DTAG+EK+ L ++ A+++FDV+ + ++ ++ + W + +V I +L GN
Sbjct: 65 DTAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGN 124
Query: 428 KVDIKDRKVKAKTI 469
K D KD+KV + I
Sbjct: 125 KCDKKDKKVSEEDI 138
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
FK +++GD GK++ ++R EF + T+GV+ F + ++ +W
Sbjct: 11 FKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLW 64
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVP-NWXRDLVRVCEGIPIVLCGNK 430
D+AG E F LR Y ++ FD+ R +++NV W +L G+P VL GNK
Sbjct: 61 DSAGGEDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNK 120
Query: 431 VDIKDRK 451
D++ ++
Sbjct: 121 KDLRPKQ 127
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 78 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVAT 188
+D T K +VGDG GKT T F +Y+ T
Sbjct: 2 EDYVTLKLYIVGDGAVGKTALFITAATNTFPTEYIPT 38
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXR--DLVRVCEGIPIVLCGN 427
DTAGQE+F L YY Q I+++D SR T+ + W ++ + I +L GN
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGN 122
Query: 428 KVD 436
K+D
Sbjct: 123 KID 125
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 78 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
D + T K ++VG+ G GK++ + R F+ AT+GV+ + +W
Sbjct: 4 DVLTTLKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIW 62
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WXRDLVRVCEGIPIVLCGNK 430
DTAGQE F LR Y I+ F V S ++ NV + W ++ PI+L G
Sbjct: 72 DTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTH 131
Query: 431 VDIKD 445
D+KD
Sbjct: 132 SDLKD 136
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVAT 188
KCV+VGDGG GKT+ + ++ F YV T
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT 50
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Frame = +2
Query: 251 VDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WXRDLVRVCEGIPIVLCGN 427
VDT G +R YI I+ FDVT+R +++NV + W ++ + +P++L G
Sbjct: 78 VDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEIRLYEKKVPLMLVGL 137
Query: 428 KVD-IKDRKVK---AKTIVFHRKKNLQYYDI 508
K + ++ RKV A+ ++ K+N Y+++
Sbjct: 138 KPNPVEKRKVSKADAERMLTRVKENGSYFEV 168
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 194
F+ V++G GG GKT+ VKR ++G F ++Y T+G
Sbjct: 108 FRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG 141
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 251 VDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVC-EGIPIVLCGN 427
+DTAG F ++ ++++ V + + + R++V + + +P+VL GN
Sbjct: 161 MDTAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGN 220
Query: 428 KVDIKDRKVKAKTIVFHRKKN 490
K D+ +++ T RK N
Sbjct: 221 KTDLVSEELRQSTRAQMRKTN 241
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 317 AIIMFDVTSRVTYKNVPNWXRDLVRVC-EGIPIVLCGNKVD 436
A+I+FDVT R +++ VP W + C IP+VL GNK D
Sbjct: 49 AVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTD 89
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEGIPIVLCGNKV 433
DTAG E+F + YY I+MF+V + + + +W D C VL NK+
Sbjct: 66 DTAGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFCPDALKVLVANKI 125
Query: 434 DIKDRKVKAKTI 469
D+ D +V +++
Sbjct: 126 DL-DEQVTTESV 136
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +3
Query: 75 ADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
A+ P FK VL+G+ G GKT+ R F T+G++ + +VW
Sbjct: 6 AERGPLFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVW 65
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
FK VL+GD G GK+ + R+ EF AT+GVE+ +R +W
Sbjct: 19 FKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIW 72
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 266 QEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL-VRVCEGIPIVLCGNKVDIK 442
QE++ + YY A++++D+ ++ N+ W +L + + I+L GNK D+K
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 90 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
TFK +++GD GKT R TG+F ++ T+GV+ N ++ +W
Sbjct: 46 TFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLW 100
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +2
Query: 254 DTAGQEKFG-GLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVR--VCEGIPIVLCG 424
DTAGQE+F + YY + M+D+T + +++ + W + +P +L G
Sbjct: 101 DTAGQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIG 160
Query: 425 NKVDIKDRKVKAKTIV--FHRKKNLQYYDI 508
NK D+ + + I F N+ ++I
Sbjct: 161 NKCDLGLERTVSSNIARKFADSHNMPLWEI 190
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 266 QEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL-VRVCEGIPIVLCGNKVDIK 442
QE++ + YY A++++D+ ++ N+ W +L + + I+L GNK D+K
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
FK VL+GD G GK+ + R EF + +T+GVE + I+ +W
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
FK +++G+ GKT+F+ R+ F +V+T+G++ N ++ +W
Sbjct: 22 FKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIW 75
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV 364
DTAGQE++ + YY I+M+D+T+ +++ V
Sbjct: 76 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAV 112
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 194
FK ++VGD GKT+FV+R++ G ++Y T+G
Sbjct: 23 FKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +2
Query: 296 YYIQGQCAIIMFDVTSRVTYKNVPNWXRDL-VRVCEGIPIVLCGNKVDIKDRK------V 454
YY A++++D+ +TY+NV W ++L I I+L GNK D++ +
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEA 61
Query: 455 KAKTIVFHRKKNLQYYDILLSQTTTSKNPS 544
KA ++H Q +D S ++ +PS
Sbjct: 62 KAFAEIYHIVSQKQIHD---SPSSDGSHPS 88
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL 385
DTAGQE+F L ++ +++FD+T ++ N+ NW L
Sbjct: 172 DTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQL 215
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 200
K + +GD G GKT+ + ++ F ++V T+G++
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGID 142
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WXRDLVRVCEGIPIVLCGNK 430
DT G ++ LR Y ++ FD+++R T++ + + W + +V G VL GNK
Sbjct: 58 DTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRVLIGNK 117
Query: 431 VDIK 442
DI+
Sbjct: 118 NDIR 121
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2
Query: 251 VDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCE------GIPI 412
VDTAGQE++ RD G +++F + S ++ + + ++R E IP+
Sbjct: 2638 VDTAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTTCTIPM 2697
Query: 413 VLCGNKV 433
V+ GNK+
Sbjct: 2698 VIVGNKM 2704
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEF 167
F+ +VG GG GK++ R+L EF
Sbjct: 2599 FRLCVVGSGGVGKSSVTIRYLKNEF 2623
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 251 VDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCE-GIPIVLCGN 427
+DTAG+EK+ GL Y AI+ +D+T + K + + L++ E +V+ G
Sbjct: 277 MDTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGC 336
Query: 428 KVDI 439
K D+
Sbjct: 337 KKDL 340
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 36.3 bits (80), Expect = 0.024
Identities = 13/49 (26%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 320 IIMFDVTSRVTYKNVPNWXRDL-VRVCEGIPIVLCGNKVDIKDRKVKAK 463
++++D+T T+ N+ W R++ E + ++ GNK D+ DR++ ++
Sbjct: 129 MLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSR 177
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
FK +L+GD G GKT + R F +++T+
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 284 LRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRV--CEGIPIVLCGNKVDIKDRK 451
+R+ Y G+ II++ +T R ++ + + RV + IPIVL GNK D++ ++
Sbjct: 1 MREQYMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKR 58
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 34.7 bits (76), Expect = 0.072
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Frame = +2
Query: 284 LRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVC------EGIPIVLCGNKVDIKD 445
+R+ +Y Q A++++DVTSR +++ + W ++ + + V+C NKVD +
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRK 65
Query: 446 RKVK 457
R V+
Sbjct: 66 RLVE 69
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV 203
FK +++GD G GKT+ +KR++ F Y AT+ +
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFNI 708
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWXRDLVRVCEGIPIVLCGNK 430
DT+G E + +R Y +I FD++ T ++ W ++ +C P++L G K
Sbjct: 286 DTSGHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCK 345
Query: 431 VDIK 442
D++
Sbjct: 346 QDLR 349
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 102 VLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
+LVGD GKT + ++ +F +KY AT+
Sbjct: 236 ILVGDSECGKTALLNAYVRNQFNEKYEATV 265
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 194
+ V++G G GKT V R +TG F +Y TLG
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_16833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = -2
Query: 442 FNIHFVSAQDNRDTFTYTDQISXPVRYIFVRNSRGYVEHDDST----LSLNIVSVSKTTK 275
FN+ Q N+D T Q+ +RY++ R +R Y++H ++ L+L S S T
Sbjct: 38 FNLKKAIDQVNKDRATVIQQLGRGLRYLYARRTR-YLDHVQTSRPPNLTLYDKSFSTCTL 96
Query: 274 LLLSGCVHT 248
L ++ HT
Sbjct: 97 LSMASAYHT 105
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWTQPDKRS 275
+ +L+G GKT+ K L F+ + V+T G+EV P F + ++ W +++
Sbjct: 361 RIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK--NWRPTSRKA 418
Query: 276 LVVLETDTI 302
L D I
Sbjct: 419 LASEFADDI 427
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/59 (23%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 290 DGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL-VRVCEGIPIVLCGNKVDIKDRKVKAK 463
D Y + ++++D+T+ +++ NW R++ + + ++ GNK D++DR+ +K
Sbjct: 79 DIIYEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSK 137
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 87 PTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
PT K V VGD GKT+F+ T F ++A++
Sbjct: 8 PTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI 42
>SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEGIPIVLCGNKV 433
D+ G++ GL+ + ++ F+V + + K +PNW + G P++L G
Sbjct: 414 DSGGRQCLFGLQPLFLTDQTLYVMTFNVNNPMEIKLMPNWFFLVQTKAPGSPVILVGTNA 473
Query: 434 D 436
D
Sbjct: 474 D 474
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWTQPDKRS 275
+ +L+G GKT+ K L F+ + +T G+EV P F + +R W + D+
Sbjct: 363 RIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVDVEQVR--PWQKSDETE 420
Query: 276 LVVLETDTI 302
V D I
Sbjct: 421 SVSQSDDAI 429
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 105 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWT---QPDKRS 275
LVG +GKTTFV +G+F + + T+G + + ++G + VW QP RS
Sbjct: 25 LVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKV----SKGNVTIKVWDIGGQPRFRS 80
Query: 276 L 278
+
Sbjct: 81 M 81
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCE--GIPIVLCGN 427
D GQ +F + + Y C + M D + N +L+ + GIPI++ GN
Sbjct: 71 DIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGN 130
Query: 428 KVDI 439
K D+
Sbjct: 131 KKDL 134
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 31.1 bits (67), Expect = 0.89
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 206 SSSIPYEPRANSF*CVDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL 385
S S P+ F C AG E+ L D G ++++ +TSR ++ V N+ +
Sbjct: 1028 SVSQPFPVSLLDFACPSGAGGERM--LEDRV-TWGDAFVLIYSITSRESFHAVWNYYYHV 1084
Query: 386 VRVCEGIP-IVLCGNKVDIKDRK 451
V E P IVL NK D+ ++
Sbjct: 1085 VTSIEAKPVIVLLANKHDLGHKR 1107
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 78 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 194
D++ + + V++G G GK+ R LT F +Y +TLG
Sbjct: 12 DNVRSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8)
Length = 796
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYV 182
F ++VG GKT F++ L G F KY+
Sbjct: 90 FNALIVGPTSCGKTRFIRGRLRGPFRGKYI 119
>SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08)
Length = 340
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +3
Query: 72 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF----HTNR-GP 236
+ D TFK ++VG G GK+ HL +YV G ++ P H R G
Sbjct: 54 LEDSCRTFKVIVVGRTGVGKS-----HLVNTLMGEYVVEEGQDLDPCTSTVSKHEKRIGR 108
Query: 237 IRFNVWTQP 263
R VW P
Sbjct: 109 TRVTVWDSP 117
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
+K ++G GG GKT+ +K +F +K+V T+
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTV 45
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN 227
+ +L+G GKT+ K L F+ V+T G+EV P F +
Sbjct: 83 RIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVD 126
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 111 GDGGTGKTTFVKRHLTGEFEKKYVATL 191
G G GKT+ VKR G+F ++Y T+
Sbjct: 15 GGAGVGKTSIVKRFYCGKFSEEYEPTV 41
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 368 NWXRDLVRVCEGIPIVLCGNKVDIKDRK 451
+W ++ C PIVL G K+D++D K
Sbjct: 575 SWYPEVSHHCPNTPIVLVGTKLDLRDDK 602
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
+ VL+G G GK+ + R TG F +Y TL
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTL 160
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 153 LTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWTQPD-KRSLVVLET 293
LTG+ +K T + + P+++HTN+ + W+ D + SL++L T
Sbjct: 1376 LTGQVDK---LTKNLSILPVLWHTNKSLVLLFTWSSSDYQGSLIILFT 1420
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN 227
+ +L+G GKT+ K F+ V+T G+EV P F +
Sbjct: 292 RIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVD 335
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 266 VRLCPHIKTNWPAVRMEY*RMYFDTQSRNVFFLELSSQMSFDKGC-FASTTISYQYTLEC 90
V+ ++ + P + Y ++ DT+ V L+ ++ + C SY L C
Sbjct: 29 VKNAVYVYLSTPRYLVSYCCIFGDTEEEEV--LQNIFELDYQPDCPVCLQQASYPVRLPC 86
Query: 89 GHIICHFRCFIAILLR 42
GH+ C F C + LR
Sbjct: 87 GHMFC-FLCIKGVALR 101
>SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2362
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 354 TKMYLTGXEIWSVYVKVSLLSCAETKWILKT 446
T Y + +W VS+LSCAE + +KT
Sbjct: 1029 TTAYSSSCPMWETQTLVSMLSCAEEIYTVKT 1059
>SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKY 179
F ++VG GKT FV L G F+ K+
Sbjct: 373 FNALIVGPASCGKTQFVVDRLRGPFQGKF 401
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 187 VATYFFSNSPVKCLLTKVVLPVPPSPTNTHL 95
V +YF +N PV P PP P+ T L
Sbjct: 5 VGSYFSTNCPVTNCKVNADFPTPPDPSTTTL 35
>SB_43431| Best HMM Match : DEAD (HMM E-Value=6.4)
Length = 209
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYV 182
F ++VG GKT F+ L G F K+V
Sbjct: 74 FNALIVGPTSCGKTRFIVDRLRGPFRGKFV 103
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 102 VLVGDGGTGKTTFVKRHLTGE 164
V++G+ GTGKTTF+ R L G+
Sbjct: 349 VMLGENGTGKTTFI-RMLAGK 368
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +2
Query: 284 LRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVC------EGIPIVLCGNK 430
+R+ +Y Q A++++DVTSR +++ + W ++ + + V+C NK
Sbjct: 1 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANK 55
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 141 VKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP 236
VK +G+FE VA + V + L++H + P
Sbjct: 107 VKEETSGDFEDLLVALMSVRISTLIYHLIKTP 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,002,845
Number of Sequences: 59808
Number of extensions: 501399
Number of successful extensions: 2063
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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