Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0152.Seq
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_34797| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_27909| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_4723| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_57065| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_23080| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_29700| Best HMM Match : DUF551 (HMM E-Value=8.8) 34 0.11
SB_25769| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_54484| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_41723| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_21596| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_46117| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_30664| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_48355| Best HMM Match : Herpes_US9 (HMM E-Value=4.7) 29 3.2
SB_17609| Best HMM Match : Herpes_US9 (HMM E-Value=4.7) 29 3.2
SB_28753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 28 7.4
SB_42304| Best HMM Match : NHL (HMM E-Value=0) 27 9.7
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +2
Query: 8 VKFLDRRKRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
VKFLD +RT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 2 VKFLDYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +2
Query: 8 VKFLDRRKRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
VKFLD +RT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 2 VKFLDYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +2
Query: 8 VKFLDRRKRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
VKFLD +RT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 2 VKFLDYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +2
Query: 20 DRRKRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
+RR RT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 25 ERRARTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 62
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +2
Query: 29 KRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
+RT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = +2
Query: 8 VKFLDRRKRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
VKFLD RK ++ AK VFINQERKLE RRR DT LVLT+N
Sbjct: 2 VKFLDLRKTNYCESIAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +2
Query: 29 KRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
+RT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 11 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 45
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +2
Query: 8 VKFLDRRKRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
VKFLD RK ++ + VFINQERKLE RRR DT LVLT+N
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKLEDRRRSDTVLVLTIN 43
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = +2
Query: 8 VKFLDRRKRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
VKFLD RK ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = +2
Query: 8 VKFLDRRKRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
VKFLD RK ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +2
Query: 32 RTSAKAFAKGVFINQERKLEVRRRLDT 112
RT+AKAFAK VFINQERKLE RRR DT
Sbjct: 2 RTTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 11 KFLDRRKRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 133
+ L RK ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 3 EILGFRKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 7 GEILGSSQENISESICQRCFHQSRTKV 87
GEILG + N ESICQ CF K+
Sbjct: 2 GEILGFRKTNYCESICQECFINQERKL 28
>SB_34797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 618 DSFSVARVRPRTSKGITD 565
D+ SVARVRPRTSKGITD
Sbjct: 34 DTVSVARVRPRTSKGITD 51
>SB_27909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 618 DSFSVARVRPRTSKGITD 565
D+ SVARVRPRTSKGITD
Sbjct: 132 DTVSVARVRPRTSKGITD 149
>SB_4723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 618 DSFSVARVRPRTSKGITD 565
D+ SVARVRPRTSKGITD
Sbjct: 64 DTVSVARVRPRTSKGITD 81
>SB_57065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 618 DSFSVARVRPRTSKGITD 565
D+ SVARVRPRTSKGITD
Sbjct: 64 DTVSVARVRPRTSKGITD 81
>SB_23080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 618 DSFSVARVRPRTSKGITD 565
D+ SVARVRPRTSKGITD
Sbjct: 64 DTVSVARVRPRTSKGITD 81
>SB_29700| Best HMM Match : DUF551 (HMM E-Value=8.8)
Length = 86
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3
Query: 618 DSFSVARVRPRTSKGITD 565
D+ SVA VRPRTSKGITD
Sbjct: 64 DTVSVAHVRPRTSKGITD 81
>SB_25769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 618 DSFSVARVRPRTSKGITD 565
D+ SVARVR +TSKGITD
Sbjct: 64 DTVSVARVRAKTSKGITD 81
>SB_54484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 572 MPLDVLGRTRATLKES 619
MPLDVLGRTRATL S
Sbjct: 1 MPLDVLGRTRATLTVS 16
>SB_41723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 572 MPLDVLGRTRATLKES 619
MPLDVLGRTRATL S
Sbjct: 1 MPLDVLGRTRATLTVS 16
>SB_21596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 572 MPLDVLGRTRATLKES 619
MPLDVLGRTRATL S
Sbjct: 1 MPLDVLGRTRATLTVS 16
>SB_46117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2
Query: 572 MPLDVLGRTRATLKESACSPWP 637
MPLDVL RTRATL S P P
Sbjct: 1 MPLDVLDRTRATLTVSRVFPSP 22
>SB_30664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 572 MPLDVLGRTRATL 610
MPLDVLGRTRATL
Sbjct: 1 MPLDVLGRTRATL 13
>SB_48355| Best HMM Match : Herpes_US9 (HMM E-Value=4.7)
Length = 98
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 583 CPGPHARYTEGIS 621
C GPHARYT+G++
Sbjct: 2 CSGPHARYTDGVN 14
>SB_17609| Best HMM Match : Herpes_US9 (HMM E-Value=4.7)
Length = 98
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 583 CPGPHARYTEGIS 621
C GPHARYT+G++
Sbjct: 2 CSGPHARYTDGVN 14
>SB_28753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 583 CPGPHARYTEGIS 621
C GPHARYT+G++
Sbjct: 2 CSGPHARYTDGVN 14
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 228 CNHTPPGVQNLWFPGSCPPSHCSNVGGSLDD 136
C+ PG + PGSC P +C N+ GSL D
Sbjct: 854 CDRCMPG--SYGGPGSCKPCNC-NMAGSLSD 881
>SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1696
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 195 WFPGSCPPSHCSNVGGSLDDIFTVRTRAVS 106
W+PG CPP C+ +L + TV + +S
Sbjct: 80 WYPGYCPPHKCAG-RNTLQECCTVYSPEIS 108
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 219 TPPGV-QNLWFPGSCPPSHCSNVGG 148
+P GV +N W PGS S+C++ GG
Sbjct: 174 SPYGVDENSWSPGSSQSSNCTSPGG 198
>SB_42304| Best HMM Match : NHL (HMM E-Value=0)
Length = 1279
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +2
Query: 50 FAKGVFINQERKLEVRRRLDTALV--LTVNMSSSDPPTLLQWLGGQLPGNQRFWTPGGVW 223
F + + E KL + R L+ L N + S PPT L+ L + ++ PGGV
Sbjct: 358 FRNNRYRSNETKLSIVPRAGRKLLQKLPANRNKSYPPTGLKCKERGLRASVAWFKPGGVD 417
Query: 224 LQS*NLKELTEGTTRSGACG 283
+ + + + R GA G
Sbjct: 418 RCAVRIPSVYRTSIRQGAAG 437
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,895,272
Number of Sequences: 59808
Number of extensions: 442999
Number of successful extensions: 1013
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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