Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0149.Seq
(623 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57296| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_38402| Best HMM Match : DM (HMM E-Value=6.1e-19) 49 3e-06
SB_3737| Best HMM Match : DM (HMM E-Value=6.1e-19) 49 3e-06
SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_47861| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_22508| Best HMM Match : DM (HMM E-Value=8.1e-10) 36 0.020
SB_36522| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11) 34 0.11
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 32 0.43
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 31 0.57
SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71) 31 0.76
SB_10026| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_54589| Best HMM Match : Extensin_2 (HMM E-Value=0.0081) 30 1.3
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 30 1.8
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 30 1.8
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_29287| Best HMM Match : Homeobox (HMM E-Value=1.4e-25) 29 3.1
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 3.1
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_27637| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 4.1
SB_51803| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-30) 28 5.4
SB_41862| Best HMM Match : POR_N (HMM E-Value=3.5) 28 5.4
SB_23104| Best HMM Match : DUF947 (HMM E-Value=0.098) 28 5.4
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 28 5.4
SB_6040| Best HMM Match : DUF947 (HMM E-Value=0.098) 28 5.4
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36) 28 7.1
SB_27175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_10374| Best HMM Match : Fibrinogen_BP (HMM E-Value=2.2) 28 7.1
SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_42588| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_24674| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_51494| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 27 9.4
SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06) 27 9.4
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_57296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +2
Query: 122 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
SE + + R+P CARCRNH + LKGHKRYC+++ CTC +L
Sbjct: 2 SESASGDENLIRSP-RCARCRNHGIVSYLKGHKRYCQWKDCTCTKCSL 48
>SB_38402| Best HMM Match : DM (HMM E-Value=6.1e-19)
Length = 118
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 164 PNCARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
P CARCRNH + LKGHK YC+++ C C L
Sbjct: 12 PKCARCRNHGVCSSLKGHKYYCRWRDCLCTKCLL 45
>SB_3737| Best HMM Match : DM (HMM E-Value=6.1e-19)
Length = 312
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 164 PNCARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
P CARCRNH + LKGHK YC+++ C C L
Sbjct: 12 PKCARCRNHGVCSSLKGHKYYCRWRDCLCTKCLL 45
>SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
CARCRNH LKGHK YC++ CTC L
Sbjct: 23 CARCRNHGALSWLKGHKHYCRWWDCTCSKCLL 54
>SB_47861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 46.0 bits (104), Expect = 2e-05
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 164 PNCARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
P C RCRNH + +L+GHK C+++ C C +
Sbjct: 20 PKCTRCRNHGILSDLRGHKHQCRFKDCACNECMI 53
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 367 PGMELDRPVP-PVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PGM+ D+ P PV PR P P P G+A D +PG PG
Sbjct: 914 PGMDGDKGPPGPVDAGPRGPPGEPGPPGPFGAAGLDGMPGKPG 956
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRG-AFTTGGTGLSNSIPG 366
PG+PG + + +P RGADG G G G A TG G PG
Sbjct: 952 PGKPGAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGFKGE-PG 995
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGV 495
PPG+ D +P VV+ P P P G+ + +PG GV
Sbjct: 1405 PPGIRGDPGIPSVVRGP------PGKPGLSGNKGKEGLPGDDGV 1442
>SB_22508| Best HMM Match : DM (HMM E-Value=8.1e-10)
Length = 450
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCES 256
C +CR+H L+GHKR C Y C C S
Sbjct: 194 CRKCRSHGKITPLEGHKRNCPYIKCDCLS 222
>SB_36522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 35.9 bits (79), Expect = 0.027
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 185 NHRLKIELKGHKRYCKYQHCTCE 253
NH ++ ELKGHK C Y C CE
Sbjct: 267 NHGIRSELKGHKYNCPYSSCKCE 289
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +1
Query: 358 IQPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 501
+ PP P PP P P PP P S PGSP SP
Sbjct: 682 VPPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSP 729
>SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11)
Length = 403
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 206 LKGHKRYCKYQHCTCESAAL 265
LKGHK YC+++ CTC L
Sbjct: 34 LKGHKHYCRWRDCTCSKCQL 53
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 370 GMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGV 495
GMEL+ + PV+++P S + PP P G + D G+PG+
Sbjct: 474 GMELNDTLTPVLRSPTSLIGPPGPP---GLCNVDVCKGTPGI 512
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG ++ P PP + P P PP LG PG+PG
Sbjct: 117 PPGPQMP-PGPPGLPGPPGPAGPPGTNGELGPPGDVGPPGNPG 158
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG D PP + P+ P +PP P G+ PG+ G
Sbjct: 187 PPGPPGDMG-PPGLPGPQGPQMPPGPPGLPGAPGPKGPPGTNG 228
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 355 GIQPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
GI P ++ PP + P P PPS P G + PG G
Sbjct: 693 GINGPPGQIGEMGPPGLPGPPGPASPPSPPGPPGPPGPNGPPGPNG 738
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPY 504
PPG ++ P PP + P PP LG PG+PG Y
Sbjct: 287 PPGPQMP-PGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGY 332
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPY 504
PPG ++ P PP + P PP LG PG+PG Y
Sbjct: 372 PPGPQMP-PGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGY 417
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG D PP + P P +PP P G+ PG+ G
Sbjct: 272 PPGPPGDMG-PPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNG 313
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 355 GIQPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
GI P L PP + P P +PP P G+ PG+ G
Sbjct: 353 GINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNG 398
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG EL PP P P +PP P G PG+ G
Sbjct: 102 PPG-ELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNG 143
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPY 504
PPG ++ P PP + P PP LG PG+PG Y
Sbjct: 457 PPGPQMP-PGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGY 502
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPY 504
PPG ++ P PP + P PP LG PG+PG Y
Sbjct: 542 PPGPQMP-PGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGY 587
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 355 GIQPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
GI P ++ PP + P P PPS P G PG G
Sbjct: 778 GINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPPGPNG 823
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 355 GIQPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
GI P ++ PP + P P PPS P G PG G
Sbjct: 863 GINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPPGPNG 908
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG+ P PP +P SP PP P G + G PG
Sbjct: 876 PPGL----PGPPGPASPPSPPGPPGPPGPKGPPGPNGCLGPPG 914
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG+ P PP +P SP PP P G + G PG
Sbjct: 791 PPGL----PGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPG 829
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG+ D +P VV+ P P G D VPG PG
Sbjct: 9 PPGIRGDPGIPSVVRGPPGKPGLPGNKGKEGLPGDDGVPGQPG 51
>SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71)
Length = 361
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 128 PGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCESAALPQT 274
P +GVP AP +K +G KR CK Q C+C A LP T
Sbjct: 291 PTTVPTGVPLAPDEILPL----IKCNYEGDKR-CKTQRCSCSRARLPCT 334
>SB_10026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 261 PYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG 383
P +R A N + + PG+G+ C+ AG + G+GVG
Sbjct: 352 PCQRSADQNPYSTQRDSQPGAGKYPCSDAGCHRHSMGNGVG 392
>SB_54589| Best HMM Match : Extensin_2 (HMM E-Value=0.0081)
Length = 667
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGT-GLSNSIPG 366
P PG+ ++ + RE G D + LRG FTTG + LSN++ G
Sbjct: 571 PPIPGSPTKSIQSRE-GGDKELKPLRGLFTTGSSPPLSNAMMG 612
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPG 366
PG PG + E E GAD G+ G RGA G + IPG
Sbjct: 240 PGSPGADGDTGEAGEHGAD-GLKGDRGA---DGLPGEDGIPG 277
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPG 366
PGEPGT+ +P + G G G G GA T G PG
Sbjct: 144 PGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQPG 187
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRG-AFTTGGTGLS 381
PG PG + ERG DG G MG RG TG TGL+
Sbjct: 452 PGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLT 491
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 494 TPGEPGTESQLAEPRERGADG--GIMGLRGA 408
TPGEPG + +P G G G G RGA
Sbjct: 508 TPGEPGAQGTKRKPGTPGRQGMPGASGRRGA 538
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 503 TLTAVSASAANHATTDTNPRNPITGGPSLFQFHQD 607
T++ S+ + + T+ T+PR+P P+ F FH +
Sbjct: 1100 TMSPTSSQSPSAVTSPTSPRSPSNPSPASFGFHSE 1134
>SB_29287| Best HMM Match : Homeobox (HMM E-Value=1.4e-25)
Length = 207
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 476 YRVHLGCHHTLTAVSASAANHATTDTNPRNPITGGPS 586
YRV G HHT A A H T P P + PS
Sbjct: 19 YRVATGAHHTRVIPLAMVAIHVTLQAIPLCPTSTQPS 55
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSV 477
PPG P PP P +P PP+ P G + D +
Sbjct: 183 PPGAPAAPPAPPFGGPPSAPPPPPAPPVGGGGSLADQL 220
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVKAPRSPMIP--PSAPRSLGSASCDSVPGSPGVSP 501
+PP + D PP AP P +P P P S G + + P P + P
Sbjct: 455 EPPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSPKQPPLPP 503
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 370 GMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYAHR 513
G+ LD PP + P PP P+S+ S V PG SP+A R
Sbjct: 4570 GLSLDSS-PPTKRPP-----PPVKPKSIKKTSPKEVAPKPGGSPHAPR 4611
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 394 PPVVKAPRSPMIP--PSAPRSLGSASCDSVPGSPG 492
P P +P P PSAP + G+ S S P +PG
Sbjct: 491 PSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPG 525
>SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 140 SSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCESAALPQTGSG 283
S+ + R P C CR H ++ E+ G K+ + C + G G
Sbjct: 46 SAQIWRGVPTCIPCRLHHVQKEIAGAKQLHTKNNAICTGKEAKKQGKG 93
>SB_27637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = +3
Query: 261 PYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG*ACTTSGEGATQPHD 428
PY +G NGN+T +A GI ++ P T G+ + +D
Sbjct: 213 PYENDGDNDGHTNGNKTNTNGNETAVHNVGIASSLPELAASDDVTAEGKTVSDAND 268
>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 282 GNGKANGNQTGPGSGRSACACAGIRNTAPGDG 377
G G NG G G G C C G + G G
Sbjct: 40 GGGGGNGGGAGNGVGAGGCGCGGGNDGGNGGG 71
>SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 818
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 382 DRPVPPVVKAPRSPMIPPSAPRSLGSAS 465
D P P++ P IPP +P SL +AS
Sbjct: 510 DNPGSPLIPTPSFEPIPPPSPTSLANAS 537
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 501
+PP P PP PR P PP +P +A P P + P
Sbjct: 210 RPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPP 256
>SB_51803| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-30)
Length = 823
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +2
Query: 95 RVPDDCXERSEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCE--SAALP 268
R+ D S G S + P+ A CR + GH RY + Q CE P
Sbjct: 516 RIEDRFSISSASGTHSHSATYSEPDEASCRRYSRGDIDNGHTRYERRQRSVCEVLPNGFP 575
Query: 269 QTG 277
TG
Sbjct: 576 STG 578
>SB_41862| Best HMM Match : POR_N (HMM E-Value=3.5)
Length = 994
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 261 PYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG 383
P +R A N + + PG+G+ C+ AG + G+G G
Sbjct: 143 PCQRSADQNPYPSQRDSQPGAGKRPCSDAGCHRHSMGNGEG 183
>SB_23104| Best HMM Match : DUF947 (HMM E-Value=0.098)
Length = 807
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 140 SSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCESAALPQTGSG 283
S+ + R P C CR H ++ E+ G K+ + C + G G
Sbjct: 75 SAQIWRGVPTCIPCRLHHVQKEIAGAKQLHTKNNTICTGKEAKKQGKG 122
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAP 444
PPG+++ P+PP + P+ P PP P
Sbjct: 558 PPGVDIPPPLPP-SEDPKPPPPPPEPP 583
>SB_6040| Best HMM Match : DUF947 (HMM E-Value=0.098)
Length = 405
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 140 SSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCESAALPQTGSG 283
S+ + R P C CR H ++ E+ G K+ + C + G G
Sbjct: 97 SAQIWRGVPTCIPCRLHHVQKEIAGAKQLHTKNNTICTGKEAKKQGKG 144
>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 346 LELGIQPPG---MELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
+ELG+ P +E+ P + A P PP+ P+ S S D SPG
Sbjct: 236 VELGVIPKEDCVLEMVSPKKTITPAQVKPSPPPTKPKPARSGSVDHGTPSPG 287
>SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36)
Length = 1290
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 370 GMELDRPVPPVVKAPR-SPMIPPSAPRSLGSASCDSVPGSPGVSPYAHRR 516
G+ PV P V A R SP++PP+ + G + SP P RR
Sbjct: 1044 GVSGKSPVKPDVTATRISPLLPPTHTPNSGPLEENPAASSPSGPPAKQRR 1093
>SB_27175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1720
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 261 PYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG 383
P +R A N + PG+G+ C+ AG + G+G G
Sbjct: 42 PCQRSADQNPYPTQRDSQPGAGKRPCSDAGCHRHSVGNGEG 82
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 215 HKRYCKYQHCTCESAAL 265
HKRYC+++ C C L
Sbjct: 358 HKRYCRWRDCNCAQCTL 374
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPG 366
PG PG + +P RG +G G+ G G+ G ++ +PG
Sbjct: 103 PGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGPNGASGMPG 146
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 358 IQPPGMELDRPVPPVVKAPRSPMIPPSAPR--SLGSASCDSVP 480
+QP M P+PP P S +P P+ LG A+ S P
Sbjct: 414 VQPSSMVSPVPIPPHHGTPDSHALPQHTPQGEDLGQAAYQSTP 456
>SB_10374| Best HMM Match : Fibrinogen_BP (HMM E-Value=2.2)
Length = 707
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 148 RSSCPS*LCALPQSQAQDR 204
+SSCP+ CA+P S+A+ R
Sbjct: 219 KSSCPTQQCAIPSSEARSR 237
>SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 388 PVPPVVKAPRS--PMIPPSAPRSLGSASCDSVPGSPGVSP 501
P P +P S P +PPS+P S S S S P P SP
Sbjct: 138 PTYPPSSSPSSSFPSVPPSSPPSSSSPSSSS-PSVPPSSP 176
>SB_42588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 237 SIALVKVPPYRRQAAGNGKANGNQ----TGPGSGR-SACACAGIRNTAP 368
+IA + Y+RQA G G+ NG++ GS R S C GI +P
Sbjct: 4 NIAFIAGGSYQRQALGGGEPNGDEHEKDLRDGSKRISGCTFEGITMQSP 52
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVKAPRSPMIPPS-APRSLGSASCDSVPG--SPG 492
QPPG+ PP P PM PPS P S+G S P +PG
Sbjct: 948 QPPGIMQ----PPTSIPPSQPMAPPSFPPSSMGGFPPSSQPSMYNPG 990
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 358 IQPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVP 480
+ PP P PP AP + PP+ S + + +++P
Sbjct: 103 VPPPPATTSAPPPPTTTAPPATTSPPTTTDSPPTTAAETLP 143
>SB_24674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 578
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/50 (22%), Positives = 26/50 (52%)
Frame = +2
Query: 197 KIELKGHKRYCKYQHCTCESAALPQTGSG*WQSKRQSDGPRLRTKRVRVR 346
++ ++GH++ Y+ T + P G W S+RQ++ + + + +R
Sbjct: 421 ELSIQGHQKSKIYEQTTIKETG-PNEGRDRWISRRQTENEKTQRHNMEIR 469
>SB_51494| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 157
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = +1
Query: 367 PGMELDRPVPPV------VKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 501
P ++LD PVPP+ R PM A R LG + ++P SP
Sbjct: 101 PDLDLDLPVPPLETPRPKKTGKRQPMRKAKADRPLGPSPPSALPDLADFSP 151
>SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06)
Length = 1425
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 388 PVPPVVKAPRSPMIPPSAPRSLGSASCDSVP 480
P PP + +P+ PP AP +GS D P
Sbjct: 134 PDPPPKYSTSAPVQPPPAPTPVGSTPSDPPP 164
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 358 IQPPGMEL-DRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGS 486
I PPGM R PP ++AP + PP AP+ G++ PGS
Sbjct: 316 IPPPGMGPPPRIPPPPIRAP-VDVYPPRAPQ--GASQTPPYPGS 356
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,722,897
Number of Sequences: 59808
Number of extensions: 422599
Number of successful extensions: 2416
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2384
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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